Chain sequence(s) |
A: MEAGKTPPTTTTTTEKKTEQVKDNDLPTDSPYMATGTLEDHKLKAYGAEGHQEPTPGLGGGSTDAPTPSGDAPAATTTDAKAP
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.1301 | |
2 | E | A | -1.6163 | |
3 | A | A | -1.2220 | |
4 | G | A | -1.6780 | |
5 | K | A | -2.2790 | |
6 | T | A | -1.2292 | |
7 | P | A | -0.9429 | |
8 | P | A | -0.6991 | |
9 | T | A | -0.3316 | |
10 | T | A | -0.2737 | |
11 | T | A | -0.2159 | |
12 | T | A | -0.3960 | |
13 | T | A | -0.8269 | |
14 | T | A | -1.6578 | |
15 | E | A | -3.1575 | |
16 | K | A | -3.6850 | |
17 | K | A | -3.7003 | |
18 | T | A | -2.5504 | |
19 | E | A | -2.8162 | |
20 | Q | A | -2.2102 | |
21 | V | A | -0.7718 | |
22 | K | A | -2.8398 | |
23 | D | A | -3.0877 | |
24 | N | A | -2.9177 | |
25 | D | A | -2.3434 | |
26 | L | A | -0.3407 | |
27 | P | A | -0.6109 | |
28 | T | A | -0.4789 | |
29 | D | A | -1.3491 | |
30 | S | A | -0.1507 | |
31 | P | A | 0.2259 | |
32 | Y | A | 1.4124 | |
33 | M | A | 1.0667 | |
34 | A | A | 0.1940 | |
35 | T | A | -0.5541 | |
36 | G | A | -0.8163 | |
37 | T | A | -0.8495 | |
38 | L | A | -0.3136 | |
39 | E | A | -2.4238 | |
40 | D | A | -2.7402 | |
41 | H | A | -2.4052 | |
42 | K | A | -2.1970 | |
43 | L | A | -1.4806 | |
44 | K | A | -2.9629 | |
45 | A | A | -1.3811 | |
46 | Y | A | -0.0561 | |
47 | G | A | -1.3773 | |
48 | A | A | -1.2481 | |
49 | E | A | -2.9651 | |
50 | G | A | -2.5455 | |
51 | H | A | -3.0395 | |
52 | Q | A | -3.0386 | |
53 | E | A | -2.9031 | |
54 | P | A | -1.5923 | |
55 | T | A | -0.7811 | |
56 | P | A | -0.5316 | |
57 | G | A | -0.2197 | |
58 | L | A | 0.7451 | |
59 | G | A | -0.3570 | |
60 | G | A | -0.6823 | |
61 | G | A | -0.9094 | |
62 | S | A | -1.1249 | |
63 | T | A | -1.2800 | |
64 | D | A | -2.0344 | |
65 | A | A | -1.1166 | |
66 | P | A | -0.8576 | |
67 | T | A | -0.7321 | |
68 | P | A | -1.1023 | |
69 | S | A | -1.1267 | |
70 | G | A | -1.5242 | |
71 | D | A | -2.1500 | |
72 | A | A | -1.1457 | |
73 | P | A | -0.7343 | |
74 | A | A | -0.2642 | |
75 | A | A | -0.0333 | |
76 | T | A | -0.3423 | |
77 | T | A | -0.6350 | |
78 | T | A | -1.1810 | |
79 | D | A | -2.2655 | |
80 | A | A | -1.6768 | |
81 | K | A | -2.1820 | |
82 | A | A | -1.0904 | |
83 | P | A | -0.6164 |