Chain sequence(s) |
A: MEGEKNSSGDLMSSSKLVAEAAKTAYEKKSVEGIDKEKVAAASADILDSAAKYGKLEDKPVGQYLEKAEGYLKQYSSGGTEKEKTDAPAAADAPKPDAPKEAAPAPAPAAEEEKSSDGFGLDDVMKGAASLSGKKSGEEEKESGGGGGFMKMAQGFMK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | -0.1485 | |
2 | E | A | -2.3204 | |
3 | G | A | -2.4100 | |
4 | E | A | -3.3898 | |
5 | K | A | -3.5365 | |
6 | N | A | -2.3799 | |
7 | S | A | -1.8250 | |
8 | S | A | -0.9453 | |
9 | G | A | -1.0264 | |
10 | D | A | -2.0025 | |
11 | L | A | -0.7340 | |
12 | M | A | -0.0220 | |
13 | S | A | -0.7379 | |
14 | S | A | -0.7711 | |
15 | S | A | -0.5902 | |
16 | K | A | -1.6290 | |
17 | L | A | -0.9551 | |
18 | V | A | -0.9641 | |
19 | A | A | -1.4029 | |
20 | E | A | -2.1062 | |
21 | A | A | -1.4601 | |
22 | A | A | -1.1530 | |
23 | K | A | -2.5732 | |
24 | T | A | -2.0940 | |
25 | A | A | -1.4873 | |
26 | Y | A | -1.2152 | |
27 | E | A | -2.8136 | |
28 | K | A | -3.2548 | |
29 | K | A | -2.6753 | |
30 | S | A | -1.2658 | |
31 | V | A | -0.2662 | |
32 | E | A | -1.9717 | |
33 | G | A | -1.4541 | |
34 | I | A | -1.5737 | |
35 | D | A | -2.8174 | |
36 | K | A | -3.3855 | |
37 | E | A | -3.6338 | |
38 | K | A | -3.0662 | |
39 | V | A | -2.0082 | |
40 | A | A | -1.5145 | |
41 | A | A | -0.9707 | |
42 | A | A | 0.0000 | |
43 | S | A | 0.2086 | |
44 | A | A | 0.2690 | |
45 | D | A | -0.2493 | |
46 | I | A | 0.9369 | |
47 | L | A | 1.1904 | |
48 | D | A | -0.4164 | |
49 | S | A | 0.0000 | |
50 | A | A | 0.0707 | |
51 | A | A | -1.0032 | |
52 | K | A | -2.0877 | |
53 | Y | A | -0.0874 | |
54 | G | A | -1.4605 | |
55 | K | A | -3.2368 | |
56 | L | A | -1.8182 | |
57 | E | A | -3.5037 | |
58 | D | A | -4.1110 | |
59 | K | A | -3.3222 | |
60 | P | A | -1.1575 | |
61 | V | A | -0.0996 | |
62 | G | A | -1.4607 | |
63 | Q | A | -1.7594 | |
64 | Y | A | 0.3878 | |
65 | L | A | 0.0043 | |
66 | E | A | -2.0553 | |
67 | K | A | -2.0066 | |
68 | A | A | -0.9623 | |
69 | E | A | -1.8334 | |
70 | G | A | -1.2718 | |
71 | Y | A | 0.3384 | |
72 | L | A | 0.2822 | |
73 | K | A | -1.5655 | |
74 | Q | A | -1.0313 | |
75 | Y | A | 0.4440 | |
76 | S | A | -0.3131 | |
77 | S | A | -0.9354 | |
78 | G | A | -1.2051 | |
79 | G | A | -1.2566 | |
80 | T | A | -1.7454 | |
81 | E | A | -3.4089 | |
82 | K | A | -4.0796 | |
83 | E | A | -4.0154 | |
84 | K | A | -3.6178 | |
85 | T | A | -2.3564 | |
86 | D | A | -2.2427 | |
87 | A | A | -1.1701 | |
88 | P | A | -0.6649 | |
89 | A | A | -0.4937 | |
90 | A | A | -0.2962 | |
91 | A | A | -0.8215 | |
92 | D | A | -1.9980 | |
93 | A | A | -1.4805 | |
94 | P | A | -1.5769 | |
95 | K | A | -2.5848 | |
96 | P | A | -2.0375 | |
97 | D | A | -2.3394 | |
98 | A | A | -1.7789 | |
99 | P | A | -1.8551 | |
100 | K | A | -2.6746 | |
101 | E | A | -2.6348 | |
102 | A | A | -1.2526 | |
103 | A | A | -0.4658 | |
104 | P | A | -0.2360 | |
105 | A | A | -0.2097 | |
106 | P | A | -0.2955 | |
107 | A | A | -0.1539 | |
108 | P | A | -0.4361 | |
109 | A | A | -0.6705 | |
110 | A | A | -1.2660 | |
111 | E | A | -3.2348 | |
112 | E | A | -3.9592 | |
113 | E | A | -4.0726 | |
114 | K | A | -3.6048 | |
115 | S | A | -2.4710 | |
116 | S | A | -1.7831 | |
117 | D | A | -1.9954 | |
118 | G | A | -0.6035 | |
119 | F | A | 1.0720 | |
120 | G | A | 0.3571 | |
121 | L | A | 0.9942 | |
122 | D | A | -1.2369 | |
123 | D | A | -1.2700 | |
124 | V | A | 1.0410 | |
125 | M | A | 0.1847 | |
126 | K | A | -1.5134 | |
127 | G | A | -0.4069 | |
128 | A | A | 0.1485 | |
129 | A | A | -0.2458 | |
130 | S | A | -0.1223 | |
131 | L | A | 0.3332 | |
132 | S | A | -0.7534 | |
133 | G | A | -1.3765 | |
134 | K | A | -2.5723 | |
135 | K | A | -2.9079 | |
136 | S | A | -2.1384 | |
137 | G | A | -2.4537 | |
138 | E | A | -3.5829 | |
139 | E | A | -4.0693 | |
140 | E | A | -4.3668 | |
141 | K | A | -3.9945 | |
142 | E | A | -3.2688 | |
143 | S | A | -1.7957 | |
144 | G | A | -1.5003 | |
145 | G | A | -1.1737 | |
146 | G | A | -0.6446 | |
147 | G | A | -0.4752 | |
148 | G | A | 0.1296 | |
149 | F | A | 1.7097 | |
150 | M | A | 0.8766 | |
151 | K | A | -0.7462 | |
152 | M | A | 0.9261 | |
153 | A | A | 0.7980 | |
154 | Q | A | -0.5085 | |
155 | G | A | -0.0224 | |
156 | F | A | 1.6471 | |
157 | M | A | 0.7388 | |
158 | K | A | -0.9548 |