Chain sequence(s) |
A: MAKCSYVFCAVLLIFIVAIGEMEAAGSKLCEKTSKTYSGKCDNKKCDKKCIEWEKAQHGACHKREAGKESCFCYFDCSKSPPGATPAPPGAAPPPAAGGSPSPPADGGSPPPPADGGSPPVDGGSPPPPSTH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.7362 | |
2 | A | A | 0.4002 | |
3 | K | A | 0.0025 | |
4 | C | A | 1.6367 | |
5 | S | A | 1.7733 | |
6 | Y | A | 2.8326 | |
7 | V | A | 3.9075 | |
8 | F | A | 4.4498 | |
9 | C | A | 4.1322 | |
10 | A | A | 4.2726 | |
11 | V | A | 5.3157 | |
12 | L | A | 5.4826 | |
13 | L | A | 5.9590 | |
14 | I | A | 6.1636 | |
15 | F | A | 6.1413 | |
16 | I | A | 5.7297 | |
17 | V | A | 4.9101 | |
18 | A | A | 3.5518 | |
19 | I | A | 3.4915 | |
20 | G | A | 1.1951 | |
21 | E | A | -0.8152 | |
22 | M | A | -0.0570 | |
23 | E | A | -1.7173 | |
24 | A | A | -1.1816 | |
25 | A | A | -0.9321 | |
26 | G | A | -0.9248 | |
27 | S | A | -0.9245 | |
28 | K | A | -1.4624 | |
29 | L | A | -0.4676 | |
30 | C | A | -0.9973 | |
31 | E | A | -1.7038 | |
32 | K | A | -1.3592 | |
33 | T | A | -1.0418 | |
34 | S | A | -1.1100 | |
35 | K | A | -1.7009 | |
36 | T | A | -0.6927 | |
37 | Y | A | -1.0625 | |
38 | S | A | -0.9987 | |
39 | G | A | -1.5861 | |
40 | K | A | -2.8715 | |
41 | C | A | -2.8844 | |
42 | D | A | -3.2571 | |
43 | N | A | -3.6011 | |
44 | K | A | -4.0292 | |
45 | K | A | -3.9458 | |
46 | C | A | 0.0000 | |
47 | D | A | -3.1259 | |
48 | K | A | -3.6137 | |
49 | K | A | -2.1958 | |
50 | C | A | 0.0000 | |
51 | I | A | -1.3842 | |
52 | E | A | -1.7393 | |
53 | W | A | -0.3995 | |
54 | E | A | -1.3226 | |
55 | K | A | -2.0083 | |
56 | A | A | 0.0000 | |
57 | Q | A | -1.8503 | |
58 | H | A | -2.1514 | |
59 | G | A | 0.0000 | |
60 | A | A | -1.7893 | |
61 | C | A | -2.2960 | |
62 | H | A | -2.5222 | |
63 | K | A | -4.0363 | |
64 | R | A | -3.9266 | |
65 | E | A | -3.4482 | |
66 | A | A | -2.4779 | |
67 | G | A | -2.9727 | |
68 | K | A | -3.9537 | |
69 | E | A | -3.9607 | |
70 | S | A | -2.6009 | |
71 | C | A | 0.0000 | |
72 | F | A | 0.0000 | |
73 | C | A | 0.0000 | |
74 | Y | A | -1.1024 | |
75 | F | A | 0.0000 | |
76 | D | A | -1.4543 | |
77 | C | A | -1.0867 | |
78 | S | A | -1.3113 | |
79 | K | A | -1.8134 | |
80 | S | A | -1.2231 | |
81 | P | A | -0.9665 | |
82 | P | A | -1.1196 | |
83 | G | A | -0.7395 | |
84 | A | A | -0.4350 | |
85 | T | A | -0.4737 | |
86 | P | A | -0.6228 | |
87 | A | A | -0.3241 | |
88 | P | A | -0.3730 | |
89 | P | A | -0.4048 | |
90 | G | A | -0.6428 | |
91 | A | A | -0.3811 | |
92 | A | A | -0.3175 | |
93 | P | A | -0.4493 | |
94 | P | A | -0.4547 | |
95 | P | A | -0.4604 | |
96 | A | A | -0.3703 | |
97 | A | A | -0.5698 | |
98 | G | A | -0.7676 | |
99 | G | A | -0.8835 | |
100 | S | A | -0.7579 | |
101 | P | A | -0.7540 | |
102 | S | A | -0.6507 | |
103 | P | A | -0.8364 | |
104 | P | A | -1.0425 | |
105 | A | A | -1.2700 | |
106 | D | A | -2.2650 | |
107 | G | A | -1.6895 | |
108 | G | A | -1.3957 | |
109 | S | A | -1.0749 | |
110 | P | A | -0.7833 | |
111 | P | A | -0.6789 | |
112 | P | A | -0.8725 | |
113 | P | A | -1.0370 | |
114 | A | A | -1.2450 | |
115 | D | A | -2.2493 | |
116 | G | A | -1.6724 | |
117 | G | A | -1.3416 | |
118 | S | A | -0.6793 | |
119 | P | A | -0.4288 | |
120 | P | A | -0.2069 | |
121 | V | A | 0.4687 | |
122 | D | A | -1.3611 | |
123 | G | A | -1.1021 | |
124 | G | A | -1.0599 | |
125 | S | A | -0.7557 | |
126 | P | A | -0.6603 | |
127 | P | A | -0.6911 | |
128 | P | A | -0.6455 | |
129 | P | A | -0.6972 | |
130 | S | A | -0.7188 | |
131 | T | A | -0.7494 | |
132 | H | A | -1.1060 |