Chain sequence(s) |
A: MGTPSYDIKNKGDDMQEEPKVKLHHEKGGDEKEKIIEKETPSQDINNKDTISSYVLRDDTQEIPKMEHEEGGYVKEKIVEKETISQYIIKIEGDDDAQEKLKVEYEEEEYEKEKIVEKETPSQDINNKGDDAQEKPKVEHEEGDDKETPSQDIIKMEGEGALEITKVVCEKIIVREDLAVQSKPPSKRDPPKMQTDNNKL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.7802 | |
2 | G | A | -0.0817 | |
3 | T | A | -0.0636 | |
4 | P | A | -0.2406 | |
5 | S | A | 0.0521 | |
6 | Y | A | 0.6225 | |
7 | D | A | -0.9331 | |
8 | I | A | 0.0445 | |
9 | K | A | -2.2574 | |
10 | N | A | -2.9043 | |
11 | K | A | -3.4911 | |
12 | G | A | -3.0964 | |
13 | D | A | -3.3903 | |
14 | D | A | -2.9518 | |
15 | M | A | -1.3244 | |
16 | Q | A | -2.6553 | |
17 | E | A | -3.5655 | |
18 | E | A | -3.4147 | |
19 | P | A | -2.3531 | |
20 | K | A | -2.0556 | |
21 | V | A | 0.0927 | |
22 | K | A | -1.0191 | |
23 | L | A | 0.0618 | |
24 | H | A | -1.6203 | |
25 | H | A | -2.6301 | |
26 | E | A | -3.2848 | |
27 | K | A | -3.4569 | |
28 | G | A | -2.8817 | |
29 | G | A | -2.5279 | |
30 | D | A | -3.9590 | |
31 | E | A | -4.1155 | |
32 | K | A | -4.1975 | |
33 | E | A | -3.2060 | |
34 | K | A | -1.6845 | |
35 | I | A | 0.5527 | |
36 | I | A | 0.5693 | |
37 | E | A | -1.8647 | |
38 | K | A | -2.6161 | |
39 | E | A | -3.0878 | |
40 | T | A | -2.0720 | |
41 | P | A | -1.6102 | |
42 | S | A | -1.4212 | |
43 | Q | A | -1.8286 | |
44 | D | A | -1.9915 | |
45 | I | A | -0.4491 | |
46 | N | A | -2.1781 | |
47 | N | A | -2.8868 | |
48 | K | A | -3.3159 | |
49 | D | A | -2.7853 | |
50 | T | A | -0.5891 | |
51 | I | A | 1.6047 | |
52 | S | A | 1.2696 | |
53 | S | A | 1.4419 | |
54 | Y | A | 2.3259 | |
55 | V | A | 2.3349 | |
56 | L | A | 0.9349 | |
57 | R | A | -1.5956 | |
58 | D | A | -3.1892 | |
59 | D | A | -3.4530 | |
60 | T | A | -2.1155 | |
61 | Q | A | -2.2585 | |
62 | E | A | -1.9590 | |
63 | I | A | 0.3891 | |
64 | P | A | -0.6952 | |
65 | K | A | -1.6887 | |
66 | M | A | -0.9600 | |
67 | E | A | -3.0333 | |
68 | H | A | -3.2526 | |
69 | E | A | -3.7496 | |
70 | E | A | -3.3512 | |
71 | G | A | -1.6401 | |
72 | G | A | -0.6060 | |
73 | Y | A | 1.0616 | |
74 | V | A | 0.1721 | |
75 | K | A | -2.7346 | |
76 | E | A | -2.7550 | |
77 | K | A | -1.7744 | |
78 | I | A | 1.1463 | |
79 | V | A | 0.2943 | |
80 | E | A | -2.7390 | |
81 | K | A | -3.8920 | |
82 | E | A | -3.1882 | |
83 | T | A | -0.9539 | |
84 | I | A | 0.8781 | |
85 | S | A | -0.2480 | |
86 | Q | A | -0.4922 | |
87 | Y | A | 1.4771 | |
88 | I | A | 2.4098 | |
89 | I | A | 2.5186 | |
90 | K | A | 0.3202 | |
91 | I | A | 0.6070 | |
92 | E | A | -1.8315 | |
93 | G | A | -3.2126 | |
94 | D | A | -4.0112 | |
95 | D | A | -4.2077 | |
96 | D | A | -3.7077 | |
97 | A | A | -3.2196 | |
98 | Q | A | -3.2238 | |
99 | E | A | -3.7833 | |
100 | K | A | -2.5854 | |
101 | L | A | -1.0470 | |
102 | K | A | -1.9485 | |
103 | V | A | -0.1810 | |
104 | E | A | -1.0783 | |
105 | Y | A | -0.3415 | |
106 | E | A | -2.5181 | |
107 | E | A | -3.3633 | |
108 | E | A | -3.6027 | |
109 | E | A | -3.2264 | |
110 | Y | A | -1.6283 | |
111 | E | A | -3.6340 | |
112 | K | A | -4.1364 | |
113 | E | A | -3.7556 | |
114 | K | A | -2.4003 | |
115 | I | A | 0.6848 | |
116 | V | A | 0.7601 | |
117 | E | A | -2.1733 | |
118 | K | A | -3.4713 | |
119 | E | A | -3.2646 | |
120 | T | A | -2.1551 | |
121 | P | A | -1.6446 | |
122 | S | A | -1.5011 | |
123 | Q | A | -1.8057 | |
124 | D | A | -2.1160 | |
125 | I | A | -0.3865 | |
126 | N | A | -2.0939 | |
127 | N | A | -2.9137 | |
128 | K | A | -3.1437 | |
129 | G | A | -3.0740 | |
130 | D | A | -3.5498 | |
131 | D | A | -3.4778 | |
132 | A | A | -2.5775 | |
133 | Q | A | -3.2106 | |
134 | E | A | -3.7954 | |
135 | K | A | -3.2827 | |
136 | P | A | -2.2688 | |
137 | K | A | -2.3496 | |
138 | V | A | -0.7879 | |
139 | E | A | -2.7548 | |
140 | H | A | -3.1078 | |
141 | E | A | -3.8551 | |
142 | E | A | -4.0974 | |
143 | G | A | -3.6981 | |
144 | D | A | -4.2456 | |
145 | D | A | -4.4959 | |
146 | K | A | -4.1110 | |
147 | E | A | -3.7022 | |
148 | T | A | -2.2360 | |
149 | P | A | -1.8258 | |
150 | S | A | -1.5341 | |
151 | Q | A | -1.2691 | |
152 | D | A | -1.1309 | |
153 | I | A | 1.3112 | |
154 | I | A | 1.5151 | |
155 | K | A | -0.4399 | |
156 | M | A | -0.1263 | |
157 | E | A | -2.2354 | |
158 | G | A | -2.0450 | |
159 | E | A | -2.3579 | |
160 | G | A | -1.2289 | |
161 | A | A | 0.2899 | |
162 | L | A | 1.0593 | |
163 | E | A | 0.2651 | |
164 | I | A | 1.2933 | |
165 | T | A | 0.6030 | |
166 | K | A | 0.1578 | |
167 | V | A | 2.0041 | |
168 | V | A | 1.9510 | |
169 | C | A | -0.0086 | |
170 | E | A | -2.0432 | |
171 | K | A | -1.2180 | |
172 | I | A | 1.8280 | |
173 | I | A | 2.4390 | |
174 | V | A | 1.3518 | |
175 | R | A | -1.8571 | |
176 | E | A | -3.0353 | |
177 | D | A | -2.0875 | |
178 | L | A | 0.4665 | |
179 | A | A | 0.5142 | |
180 | V | A | 1.1502 | |
181 | Q | A | -0.7084 | |
182 | S | A | -1.1616 | |
183 | K | A | -2.1136 | |
184 | P | A | -1.7241 | |
185 | P | A | -1.6690 | |
186 | S | A | -2.2055 | |
187 | K | A | -3.3079 | |
188 | R | A | -3.7313 | |
189 | D | A | -3.5973 | |
190 | P | A | -2.2460 | |
191 | P | A | -1.7719 | |
192 | K | A | -1.9781 | |
193 | M | A | -0.7155 | |
194 | Q | A | -1.9013 | |
195 | T | A | -1.9893 | |
196 | D | A | -3.2682 | |
197 | N | A | -3.2538 | |
198 | N | A | -2.8441 | |
199 | K | A | -2.1941 | |
200 | L | A | 0.1815 |