Chain sequence(s) |
A: MAKSKEDITYATSQARLSEDEAVRVAYEHGSPLEGGKIADSQPVDLFSSAHNMPKSGQTTMDSNTSDQSQMQRDTQEGGSKEFTTGAPG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.6380 | |
2 | A | A | -0.9808 | |
3 | K | A | -2.2281 | |
4 | S | A | -2.4247 | |
5 | K | A | -2.9669 | |
6 | E | A | -3.1903 | |
7 | D | A | -2.4241 | |
8 | I | A | 0.1196 | |
9 | T | A | 0.5091 | |
10 | Y | A | 1.5426 | |
11 | A | A | 0.6608 | |
12 | T | A | -0.1261 | |
13 | S | A | -0.8923 | |
14 | Q | A | -1.6061 | |
15 | A | A | -1.0301 | |
16 | R | A | -1.9400 | |
17 | L | A | -0.8555 | |
18 | S | A | -2.0181 | |
19 | E | A | -2.8462 | |
20 | D | A | -3.1247 | |
21 | E | A | -2.8993 | |
22 | A | A | -1.0039 | |
23 | V | A | -0.0485 | |
24 | R | A | -0.8739 | |
25 | V | A | 0.4931 | |
26 | A | A | 0.3895 | |
27 | Y | A | 0.1610 | |
28 | E | A | -1.6082 | |
29 | H | A | -1.6741 | |
30 | G | A | -1.0549 | |
31 | S | A | -0.7927 | |
32 | P | A | -0.3632 | |
33 | L | A | 0.0493 | |
34 | E | A | -1.7585 | |
35 | G | A | -1.1642 | |
36 | G | A | -1.1940 | |
37 | K | A | -1.6924 | |
38 | I | A | 0.4868 | |
39 | A | A | -0.6697 | |
40 | D | A | -1.9252 | |
41 | S | A | -1.0438 | |
42 | Q | A | -1.6253 | |
43 | P | A | -0.4645 | |
44 | V | A | 1.2226 | |
45 | D | A | 0.3729 | |
46 | L | A | 2.1024 | |
47 | F | A | 1.9103 | |
48 | S | A | 0.3324 | |
49 | S | A | -0.0602 | |
50 | A | A | 0.1092 | |
51 | H | A | -1.0239 | |
52 | N | A | -1.4206 | |
53 | M | A | -0.4867 | |
54 | P | A | -1.1970 | |
55 | K | A | -2.1339 | |
56 | S | A | -1.4558 | |
57 | G | A | -1.6862 | |
58 | Q | A | -1.6853 | |
59 | T | A | -0.8056 | |
60 | T | A | -0.3461 | |
61 | M | A | -0.2194 | |
62 | D | A | -1.7094 | |
63 | S | A | -1.6124 | |
64 | N | A | -2.0510 | |
65 | T | A | -1.8019 | |
66 | S | A | -1.9442 | |
67 | D | A | -2.9098 | |
68 | Q | A | -2.3944 | |
69 | S | A | -1.9819 | |
70 | Q | A | -2.0293 | |
71 | M | A | -1.1922 | |
72 | Q | A | -2.5246 | |
73 | R | A | -3.3233 | |
74 | D | A | -3.5079 | |
75 | T | A | -2.8889 | |
76 | Q | A | -3.0922 | |
77 | E | A | -3.0401 | |
78 | G | A | -2.2096 | |
79 | G | A | -2.1804 | |
80 | S | A | -1.9059 | |
81 | K | A | -2.3650 | |
82 | E | A | -1.8702 | |
83 | F | A | 0.4431 | |
84 | T | A | -0.0755 | |
85 | T | A | -0.0287 | |
86 | G | A | -0.3602 | |
87 | A | A | -0.4370 | |
88 | P | A | -0.5743 | |
89 | G | A | -0.6351 |