Project name: AfCgS_wt_cut1546

Status: done

Started: 2025-02-25 10:00:53
Chain sequence(s) A: EVRSIADPAVRDREVVFLSNGHYSTMLTSTGAGYSKWNGQAISRWKADPTDDRWGTFIFLRDTTNGQWWSATAEPRVIEGEKTKTIFTDDKAEFHKTIGDLQSVVECIVATEHDAEGRRITLLNVGSEDRYIEVTSYMEPVIASEDDDNAHPLFSRMFVQTEIGRRGDVIRAWRNRRSQNEPGTVIAHLAADNAGPSRPTEFETDRAKFIGRGRSLREAAAFDAGATLSSSDGFTLDPILSLRRTVRVPAGKKVSVIFWTIAAPSREEVDKAIDRYRHPDAFAHELVHAWTRTQVQMRHVGVTSQQAAAFQHLGRYLTYPDMHLRADSETLKTGLASQRALWPLAISGDFPIFSLRINDDMDMDIAREALSAHEYLRSRGVIFDLVIVNERAASYAQDMQHALDHISETQRRINPADGRPHVFSVRRDLMDEETWSALLAASRVVLHVRNGKIVDQINRAVSLFAASDAAQARLPVPAFPVAEPVEDAGDLDFWNGFGGFAKNGQEYVVRLNGGQSTPHPWINVISNENFGFHISAEGAGFSWSRNSRDYQLTPWTNDPVINRPGEAFYVADVETGKLYTPCAALSRDPEAMFETRHGLGYSILTGVADTLEVELTQTVDREKPVKFSQVIVRNKGSKSRRLKVYAYVEWVLGNNGQKSAPFILSRHDAGSNAIFASNPYSIDYSARTSFLTLDSEASGFTTSRREFIGRFGSAQAPQGIVAGAALSGTTEVDGDPCAALMQEIHLKPGEERHMTFILGDADNAEEAEALVKDVRQADFLSVLEESKKFWTGFTGQLQVSTPDAGFNHMVNNWLPYQALACRILARTAFYQSSGAFGFRDQLQDTLAFPDLARTQILRAAGRQFPEGDVQHWWLPLTGAGVRTTISDDVVWLAYAINQYVSATGDAAILDESIPFLKGPALMPGQHDAFFQPETSERSATLYEHAALALDLAIHRTGENGLPLILGGDWNDGMNRVGVGGKGTSVWLGWFLAGALRDFIEIAEKRGDTDRVGKWASHREKLRHVLETAGWDGSYYRRGYFDDGTPLGSASSEECQIDSLGQSWSVLSGEGEEGRSRQAMDAVMEHLVDEKTGIIRLFTPPFSRASHDPGYIKGYPPGVRENGGQYTHAATWVVLALAKQGRAQEAWNCFKLLNPVNHALDAASSETYRVEPYVVTADVYGEGAYAGRGGWSWYTGSAGWLYRAAVEGILGITRTDGKLHVSPSLPEDWSGFSIRITLDGKARDIAVSRKAGTADVSVSVDGGKEQADLLRAEVRSIADPAVRDREVVFLSNGHYSTMLTSTGAGYSKWNGQAISRWKADPTDDRWGTFIFLRDTTNGQWWSATAEPRVIEGEKTKTIFTDDKAEFHKTIGDLQSVVECIVATEHDAEGRRITLLNVGSEDRYIEVTSYMEPVIASEDDDNAHPLFSRMFVQTEIGRRGDVIRAWRNRRSQNEPGTVIAHLAADNAGPSRPTEFETDRAKFIGRGRSLREAAAFDAGATLSSSDGFTLDPILSLRRTVRVPAGKKVSVIFWTIAAPSREEVDKAIDRYRHPDAFAHELVHAWTRTQVQMRHVGVTSQQAAAFQHLGRYLTYPDMHLRADSETLKTGLASQRALWPLAISGDFPIFSLRINDDMDMDIAREALSAHEYLRSRGVIFDLVIVNERAASYAQDMQHALDHISETQRRINPADGRPHVFSVRRDLMDEETWSALLAASRVVLHVRNGKIVDQINRAVSLFAASDAAQARLPVPAFPVAEPVEDAGDLDFWNGFGGFAKNGQEYVVRLNGGQSTPHPWINVISNENFGFHISAEGAGFSWSRNSRDYQLTPWTNDPVINRPGEAFYVADVETGKLYTPCAALSRDPEAMFETRHGLGYSILTGVADTLEVELTQTVDREKPVKFSQVIVRNKGSKSRRLKVYAYVEWVLGNNGQKSAPFILSRHDAGSNAIFASNPYSIDYSARTSFLTLDSEASGFTTSRREFIGRFGSAQAPQGIVAGAALSGTTEVDGDPCAALMQEIHLKPGEERHMTFILGDADNAEEAEALVKDVRQADFLSVLEESKKFWTGFTGQLQVSTPDAGFNHMVNNWLPYQALACRILARTAFYQSSGAFGFRDQLQDTLAFPDLARTQILRAAGRQFPEGDVQHWWLPLTGAGVRTTISDDVVWLAYAINQYVSATGDAAILDESIPFLKGPALMPGQHDAFFQPETSERSATLYEHAALALDLAIHRTGENGLPLILGGDWNDGMNRVGVGGKGTSVWLGWFLAGALRDFIEIAEKRGDTDRVGKWASHREKLRHVLETAGWDGSYYRRGYFDDGTPLGSASSEECQIDSLGQSWSVLSGEGEEGRSRQAMDAVMEHLVDEKTGIIRLFTPPFSRASHDPGYIKGYPPGVRENGGQYTHAATWVVLALAKQGRAQEAWNCFKLLNPVNHALDAASSETYRVEPYVVTADVYGEGAYAGRGGWSWYTGSAGWLYRAAVEGILGITRTDGKLHVSPSLPEDWSGFSIRITLDGKARDIAVSRKAGTADVSVSVDG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:05)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:05)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:05)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:05)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:11)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:11)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:17:55)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/777c7ee1053c312/tmp/folded.pdb                (00:17:55)
[INFO]       Main:     Simulation completed successfully.                                          (00:25:35)
Show buried residues

Minimal score value
-4.1822
Maximal score value
2.7074
Average score
-0.6946
Total score value
-882.7935

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1546 E A -0.9751
1547 V A 0.7628
1548 R A 0.3159
1549 S A 0.2012
1550 I A 0.0416
1551 A A -0.6066
1552 D A -1.1928
1553 P A 0.0000
1554 A A -1.1131
1555 V A -1.3557
1556 R A -2.7333
1557 D A -2.8290
1558 R A -1.6874
1559 E A -0.9454
1560 V A 0.0000
1561 V A 0.0000
1562 F A 0.0000
1563 L A 0.0000
1564 S A 0.0000
1565 N A -1.2115
1566 G A -1.4147
1567 H A -1.8688
1568 Y A 0.0000
1569 S A 0.0000
1570 T A 0.0000
1571 M A 0.0000
1572 L A 0.1409
1573 T A 0.0000
1574 S A 0.0000
1575 T A -0.2305
1576 G A -0.0953
1577 A A 0.0000
1578 G A 0.0000
1579 Y A 0.1024
1580 S A 0.0000
1581 K A -0.8826
1582 W A -1.2248
1583 N A -1.9495
1584 G A -1.3483
1585 Q A -1.1356
1586 A A 0.0000
1587 I A 0.0000
1588 S A 0.0000
1589 R A -0.1898
1590 W A -0.1444
1591 K A -0.8002
1592 A A -0.8326
1593 D A -0.7635
1594 P A -1.1797
1595 T A 0.0000
1596 D A -1.1366
1597 D A -0.8378
1598 R A -0.5041
1599 W A -0.0546
1600 G A 0.0489
1601 T A 0.0972
1602 F A 0.0000
1603 I A 0.0000
1604 F A 0.0000
1605 L A 0.0000
1606 R A -0.5684
1607 D A 0.0000
1608 T A -0.5683
1609 T A -0.8121
1610 N A -1.5606
1611 G A -1.5650
1612 Q A -1.2290
1613 W A 0.0000
1614 W A -0.0972
1615 S A 0.0000
1616 A A 0.0000
1617 T A -0.1401
1618 A A 0.0000
1619 E A -0.2948
1620 P A 0.0000
1621 R A 0.0000
1622 V A 0.0000
1623 I A 0.0000
1624 E A -2.0028
1625 G A -1.6227
1626 E A 0.0000
1627 K A -2.1381
1628 T A -1.1576
1629 K A -0.8484
1630 T A 0.0000
1631 I A 0.0983
1632 F A 0.0000
1633 T A -0.4003
1634 D A -1.0666
1635 D A -0.6723
1636 K A -0.8931
1637 A A 0.0000
1638 E A -0.7038
1639 F A 0.0000
1640 H A -0.7000
1641 K A 0.0000
1642 T A -1.0359
1643 I A -1.1550
1644 G A -1.4473
1645 D A -1.6248
1646 L A 0.0000
1647 Q A -0.5925
1648 S A 0.0489
1649 V A -0.0774
1650 V A 0.0000
1651 E A -0.6628
1652 C A 0.0000
1653 I A 0.0000
1654 V A 0.0000
1655 A A 0.0000
1656 T A -1.2944
1657 E A -2.0992
1658 H A -1.7774
1659 D A -0.9914
1660 A A 0.0000
1661 E A 0.0000
1662 G A 0.0000
1663 R A -0.4838
1664 R A -0.4680
1665 I A -0.0773
1666 T A -0.2644
1667 L A 0.0000
1668 L A -0.4045
1669 N A 0.0000
1670 V A 0.6499
1671 G A -0.8959
1672 S A -1.5167
1673 E A -2.7443
1674 D A -3.1941
1675 R A -1.9231
1676 Y A -0.8384
1677 I A 0.0000
1678 E A 0.0000
1679 V A 0.0000
1680 T A 0.0000
1681 S A 0.0000
1682 Y A 0.0860
1683 M A 0.0000
1684 E A 0.0000
1685 P A 0.0000
1686 V A 0.0000
1687 I A 0.0000
1688 A A 0.0000
1689 S A -1.5725
1690 E A -1.9891
1691 D A -2.8918
1692 D A -2.5454
1693 D A 0.0000
1694 N A -1.7621
1695 A A -1.4148
1696 H A -0.6934
1697 P A -0.4318
1698 L A 0.4001
1699 F A 0.4101
1700 S A 0.0000
1701 R A 0.0000
1702 M A 0.0000
1703 F A 0.0000
1704 V A 0.0000
1705 Q A -0.5152
1706 T A 0.0000
1707 E A -1.2633
1708 I A -1.4599
1709 G A -2.0779
1710 R A -3.0289
1711 R A -3.0305
1712 G A -2.0513
1713 D A -1.6147
1714 V A 0.0000
1715 I A 0.0000
1716 R A -1.0419
1717 A A 0.0000
1718 W A -0.7414
1719 R A -0.8438
1720 N A -1.1131
1721 R A -1.7907
1722 R A -1.5128
1723 S A -1.7226
1724 Q A -2.2634
1725 N A -2.3458
1726 E A -1.9358
1727 P A -1.2266
1728 G A -1.1711
1729 T A 0.0000
1730 V A 0.0000
1731 I A 0.0000
1732 A A 0.0000
1733 H A 0.0000
1734 L A 0.0000
1735 A A 0.0000
1736 A A 0.0000
1737 D A -2.4574
1738 N A -1.8066
1739 A A -1.1956
1740 G A -1.4723
1741 P A -1.2354
1742 S A -1.5673
1743 R A -2.4083
1744 P A -1.8788
1745 T A -1.5019
1746 E A -0.9149
1747 F A -0.4378
1748 E A 0.0000
1749 T A 0.0000
1750 D A -0.5331
1751 R A 0.0000
1752 A A -0.4771
1753 K A -1.0375
1754 F A 0.0000
1755 I A 0.0000
1756 G A -0.6333
1757 R A -0.6653
1758 G A -0.6008
1759 R A -0.5441
1760 S A -0.2049
1761 L A 0.0493
1762 R A -0.2154
1763 E A 0.0000
1764 A A -0.4897
1765 A A -0.8278
1766 A A 0.0000
1767 F A 0.0000
1768 D A -1.9595
1769 A A -1.1165
1770 G A -0.9262
1771 A A -0.6964
1772 T A -0.6624
1773 L A 0.0000
1774 S A -0.5755
1775 S A -0.5243
1776 S A -0.7155
1777 D A -1.0696
1778 G A -0.5435
1779 F A 0.1023
1780 T A 0.0515
1781 L A 0.5952
1782 D A -0.0457
1783 P A 0.0000
1784 I A 0.0000
1785 L A 0.0000
1786 S A 0.0000
1787 L A 0.0000
1788 R A -0.5953
1789 R A -1.2757
1790 T A -0.8308
1791 V A 0.0000
1792 R A -2.1278
1793 V A 0.0000
1794 P A -2.2584
1795 A A -1.5927
1796 G A -1.4310
1797 K A -2.3715
1798 K A -2.6576
1799 V A 0.0000
1800 S A -0.9248
1801 V A 0.0000
1802 I A 0.0000
1803 F A 0.0000
1804 W A 0.0000
1805 T A 0.0000
1806 I A 0.0000
1807 A A 0.0000
1808 A A 0.0000
1809 P A -1.1215
1810 S A -2.0571
1811 R A -3.4843
1812 E A -3.9250
1813 E A -3.5877
1814 V A 0.0000
1815 D A -3.9024
1816 K A -4.0990
1817 A A 0.0000
1818 I A 0.0000
1819 D A -3.8801
1820 R A -3.8557
1821 Y A 0.0000
1822 R A -2.9500
1823 H A -2.9679
1824 P A -2.2175
1825 D A -2.3671
1826 A A -1.8145
1827 F A 0.0000
1828 A A -0.5850
1829 H A -0.8633
1830 E A -0.1631
1831 L A 0.5484
1832 V A 1.2566
1833 H A -0.3085
1834 A A 0.0000
1835 W A 1.0844
1836 T A 0.6260
1837 R A 0.0402
1838 T A 0.0000
1839 Q A -0.5480
1840 V A 0.0465
1841 Q A -0.6917
1842 M A -0.9842
1843 R A -2.0748
1844 H A -1.6407
1845 V A -1.1891
1846 G A -1.0564
1847 V A -0.6883
1848 T A -0.6427
1849 S A -0.7900
1850 Q A -1.0194
1851 Q A -0.9060
1852 A A 0.0000
1853 A A -0.5312
1854 A A 0.0000
1855 F A 0.0000
1856 Q A 0.0000
1857 H A -0.2097
1858 L A 0.0000
1859 G A 0.0000
1860 R A 0.0000
1861 Y A 0.0000
1862 L A 0.0000
1863 T A -0.0340
1864 Y A 0.0000
1865 P A 0.0000
1866 D A -0.9819
1867 M A -0.7892
1868 H A -0.6436
1869 L A -0.3868
1870 R A -0.7140
1871 A A -1.1859
1872 D A -2.7494
1873 S A -2.5013
1874 E A -3.0461
1875 T A -1.9050
1876 L A 0.0000
1877 K A -2.1695
1878 T A -1.0949
1879 G A -0.9185
1880 L A 0.0000
1881 A A -0.3083
1882 S A 0.1350
1883 Q A -0.3515
1884 R A -0.6018
1885 A A 1.0467
1886 L A 2.7074
1887 W A 2.1469
1888 P A 1.7690
1889 L A 2.4727
1890 A A 1.8374
1891 I A 2.1578
1892 S A 0.4927
1893 G A -0.7684
1894 D A -1.7156
1895 F A -0.3612
1896 P A -0.4299
1897 I A 0.0000
1898 F A 0.0000
1899 S A 0.0000
1900 L A 0.0000
1901 R A -0.7223
1902 I A 0.0000
1903 N A -1.7624
1904 D A -1.6949
1905 D A -1.8430
1906 M A -0.3834
1907 D A -1.5152
1908 M A -1.2763
1909 D A -2.0514
1910 I A 0.0000
1911 A A 0.0000
1912 R A -1.5148
1913 E A -1.4691
1914 A A 0.0000
1915 L A -0.8441
1916 S A -1.0391
1917 A A 0.0000
1918 H A 0.0000
1919 E A -1.9815
1920 Y A 0.0000
1921 L A 0.0000
1922 R A -1.2637
1923 S A -1.1381
1924 R A 0.0000
1925 G A -0.7784
1926 V A 0.0000
1927 I A 0.0778
1928 F A 0.0000
1929 D A 0.0000
1930 L A 0.0000
1931 V A 0.0000
1932 I A 0.0000
1933 V A 0.0000
1934 N A 0.0000
1935 E A -1.4501
1936 R A -1.9394
1937 A A -0.7456
1938 A A -0.5090
1939 S A -0.2888
1940 Y A -0.2282
1941 A A 0.0000
1942 Q A -2.0524
1943 D A -2.5764
1944 M A 0.0000
1945 Q A -2.0669
1946 H A -2.0135
1947 A A -1.6543
1948 L A 0.0000
1949 D A -2.0231
1950 H A -1.7530
1951 I A -1.1031
1952 S A 0.0000
1953 E A -2.7040
1954 T A -1.5560
1955 Q A -1.6364
1956 R A -2.0859
1957 R A -2.0198
1958 I A -0.3313
1959 N A -0.8821
1960 P A -0.6826
1961 A A -0.8461
1962 D A -1.9504
1964 G A -1.3959
1965 R A -1.5067
1966 P A 0.0000
1967 H A -0.8576
1968 V A 0.0000
1969 F A 0.0000
1970 S A -0.1085
1971 V A 0.1228
1972 R A -0.7241
1973 R A -1.3556
1974 D A -1.3605
1975 L A 0.2521
1976 M A 0.0000
1977 D A -3.0050
1978 E A -3.3591
1979 E A -3.0751
1980 T A 0.0000
1981 W A -1.4308
1982 S A -1.1291
1983 A A -1.0183
1984 L A -0.2307
1985 L A 0.1295
1986 A A 0.0000
1987 A A 0.1994
1988 S A 0.0000
1989 R A 0.0000
1990 V A 0.0000
1991 V A 0.1352
1992 L A -0.5642
1993 H A -1.5528
1994 V A 0.0000
1995 R A -3.1628
1996 N A -2.6387
1997 G A -2.6068
1998 K A -3.0808
1999 I A -1.7245
2000 V A 0.0000
2001 D A -2.8548
2002 Q A -2.1282
2003 I A 0.0000
2004 N A -1.3906
2005 R A -1.0429
2006 A A 0.0000
2007 V A 0.7913
2008 S A 0.6087
2009 L A 1.5554
2010 F A 1.1799
2011 A A 0.4924
2012 A A 0.4910
2020 S A -0.3726
2021 D A -0.8220
2022 A A -0.4253
2023 A A 0.0317
2024 Q A -0.0201
2025 A A 0.0000
2026 R A -0.6242
2027 L A 0.7018
2028 P A -0.0377
2029 V A 0.1318
2030 P A 0.1243
2031 A A 0.0586
2032 F A 0.3299
2033 P A 0.5450
2034 V A 1.1139
2035 A A -0.7055
2036 E A -2.1004
2037 P A -1.4797
2038 V A -1.4957
2039 E A -2.8362
2040 D A -2.7346
2041 A A -1.7439
2042 G A -1.7987
2043 D A -2.3515
2044 L A -1.2139
2045 D A -1.2704
2046 F A -0.6975
2047 W A -0.3883
2048 N A 0.0000
2049 G A -1.0168
2050 F A -0.1832
2051 G A 0.0000
2052 G A 0.0000
2053 F A 0.0000
2054 A A -1.6750
2055 K A -2.9147
2056 N A -2.4138
2057 G A 0.0000
2058 Q A -1.5594
2059 E A -1.3741
2060 Y A 0.0000
2061 V A -0.0800
2062 V A 0.0000
2063 R A -0.9278
2064 L A 0.0000
2065 N A -1.1776
2066 G A 0.0000
2067 G A -0.7476
2068 Q A -0.9140
2069 S A -0.5418
2070 T A 0.0000
2071 P A 0.0000
2072 H A -0.3539
2073 P A 0.0000
2074 W A 0.0000
2075 I A 0.0000
2076 N A 0.0000
2077 V A 0.0000
2078 I A 0.0000
2079 S A 0.0000
2080 N A 0.0000
2081 E A -2.7171
2082 N A -2.4166
2083 F A 0.0000
2084 G A 0.0000
2085 F A 0.0000
2086 H A 0.0000
2087 I A 0.0000
2088 S A 0.0000
2089 A A 0.0000
2090 E A 0.0000
2091 G A 0.0000
2092 A A -0.1604
2093 G A 0.0000
2094 F A 0.0000
2095 S A 0.0000
2096 W A 0.0000
2097 S A 0.0000
2098 R A -1.1113
2099 N A 0.0000
2100 S A 0.0000
2101 R A -1.2216
2102 D A -1.3031
2103 Y A 0.0000
2104 Q A 0.0000
2105 L A 0.0000
2106 T A 0.0000
2107 P A -0.1926
2108 W A -0.0877
2109 T A -0.1349
2110 N A 0.0000
2111 D A -0.3387
2112 P A -0.2953
2113 V A 0.0000
2114 I A 0.0282
2115 N A -0.3947
2116 R A -0.6865
2117 P A 0.0000
2118 G A 0.0000
2119 E A -0.3336
2120 A A 0.0000
2121 F A 0.0000
2122 Y A 0.0000
2123 V A 0.0000
2124 A A 0.0000
2125 D A 0.0000
2126 V A -0.7942
2127 E A -2.0458
2128 T A -1.3264
2129 G A -0.6238
2130 K A -0.8067
2131 L A -0.0384
2132 Y A 0.0000
2133 T A 0.0000
2134 P A 0.0000
2135 C A 0.0000
2136 A A 0.0000
2137 A A -0.3814
2138 L A 0.0000
2139 S A 0.0000
2140 R A -0.6223
2141 D A -0.8203
2142 P A -1.3719
2143 E A -2.5211
2144 A A 0.0000
2145 M A -0.4526
2146 F A 0.0000
2147 E A -0.8850
2148 T A 0.0000
2149 R A -0.4233
2150 H A 0.0000
2151 G A 0.0000
2152 L A 0.0000
2153 G A 0.0000
2154 Y A 0.0000
2155 S A 0.0000
2156 I A -0.0134
2157 L A 0.0000
2158 T A 0.0000
2159 G A 0.0000
2160 V A -0.4680
2161 A A -1.0403
2162 D A -2.2166
2163 T A -1.4830
2164 L A 0.0000
2165 E A -1.0129
2166 V A 0.0000
2167 E A -0.4193
2168 L A 0.0000
2169 T A 0.0000
2170 Q A 0.0000
2171 T A 0.0000
2172 V A 0.0000
2173 D A -1.3397
2174 R A -2.0235
2175 E A -2.9056
2176 K A -2.1512
2177 P A -1.5198
2178 V A 0.0000
2179 K A 0.0000
2180 F A 0.0000
2181 S A 0.0000
2182 Q A 0.0000
2183 V A 0.0000
2184 I A -1.0711
2185 V A 0.0000
2186 R A -2.4935
2187 N A 0.0000
2188 K A -3.2669
2189 G A -2.5213
2190 S A -1.9059
2191 K A -2.7663
2192 S A -2.6529
2193 R A -2.3902
2194 R A -2.8229
2195 L A 0.0000
2196 K A 0.0000
2197 V A 0.0000
2198 Y A 0.0000
2199 A A 0.0000
2200 Y A 0.0000
2201 V A 0.0000
2202 E A -0.2081
2203 W A 0.0000
2204 V A -0.2681
2205 L A 0.0000
2206 G A -0.9556
2207 N A -1.4405
2208 N A -1.6335
2209 G A -1.1012
2210 Q A -1.2560
2211 K A -2.1496
2212 S A 0.0000
2213 A A -0.5141
2214 P A -0.4248
2215 F A 0.0359
2216 I A 0.0000
2217 L A -0.5015
2218 S A -1.0285
2219 R A -2.3094
2220 H A -1.7544
2221 D A -1.6291
2222 A A -0.9236
2223 G A -1.0030
2224 S A -1.5204
2225 N A -1.3530
2226 A A 0.0000
2227 I A 0.0000
2228 F A 0.0000
2229 A A 0.0000
2230 S A -0.3486
2231 N A 0.0000
2232 P A 0.1366
2233 Y A 0.2128
2234 S A 0.0449
2235 I A 0.7198
2236 D A -1.0171
2237 Y A 0.0000
2238 S A -0.2930
2239 A A -0.4441
2240 R A 0.0000
2241 T A -0.5831
2242 S A 0.0000
2243 F A 0.0000
2244 L A 0.0000
2245 T A 0.0000
2246 L A 0.0000
2247 D A -2.8154
2248 S A -2.0039
2249 E A -2.5940
2250 A A -1.5126
2251 S A -0.9589
2252 G A -0.5366
2253 F A 0.0052
2254 T A 0.0000
2255 T A 0.0000
2256 S A 0.0000
2257 R A 0.0000
2258 R A -2.4965
2259 E A -1.6401
2260 F A 0.0000
2261 I A 0.0000
2262 G A -1.6069
2263 R A -1.2823
2264 F A -0.2074
2265 G A 0.0000
2266 S A -0.4596
2267 A A -0.3738
2268 Q A -0.4191
2269 A A 0.1059
2270 P A 0.0000
2271 Q A 0.1278
2272 G A 0.0615
2273 I A 0.9889
2274 V A 1.6662
2275 A A 0.6134
2276 G A 0.1958
2277 A A 0.4528
2278 A A -0.0245
2279 L A -0.1206
2280 S A -0.3860
2281 G A -0.6733
2282 T A -1.0570
2283 T A -1.3996
2284 E A -2.2202
2285 V A -0.8505
2286 D A -1.5750
2287 G A -0.9088
2288 D A 0.0000
2289 P A -0.3470
2290 C A 0.0000
2291 A A 0.0000
2292 A A 0.0000
2293 L A 0.0000
2294 M A 0.0000
2295 Q A -1.4612
2296 E A -2.1708
2297 I A -1.8556
2298 H A -2.5197
2299 L A 0.0000
2300 K A -3.7422
2301 P A -2.8544
2302 G A -2.6353
2303 E A -3.0817
2304 E A -3.1575
2305 R A -2.9122
2306 H A -2.1297
2307 M A 0.0000
2308 T A -0.8520
2309 F A 0.0000
2310 I A 0.0000
2311 L A 0.0000
2312 G A 0.0000
2313 D A 0.0000
2314 A A 0.0000
2315 D A -1.6772
2316 N A -2.1341
2317 A A -2.0548
2318 E A -3.1216
2319 E A -2.9984
2320 A A 0.0000
2321 E A -2.8719
2322 A A -2.3268
2323 L A -1.9817
2324 V A 0.0000
2325 K A -2.8931
2326 D A -3.1542
2327 V A 0.0000
2328 R A -2.6705
2329 Q A -2.9333
2330 A A -1.9986
2331 D A -2.1794
2332 F A 0.0000
2333 L A -0.3439
2334 S A -1.2185
2335 V A -1.4177
2336 L A -1.5295
2337 E A -2.9870
2338 E A -3.0357
2339 S A 0.0000
2340 K A -2.4991
2341 K A -2.7547
2342 F A -1.0651
2343 W A 0.0000
2344 T A -1.0184
2345 G A -0.6749
2346 F A 0.1858
2347 T A 0.0000
2348 G A -0.7360
2349 Q A -0.6880
2350 L A -0.5858
2351 Q A -1.1064
2352 V A 0.0000
2353 S A -0.7413
2354 T A 0.0000
2355 P A -0.7485
2356 D A -0.6800
2357 A A -0.8471
2358 G A 0.0000
2359 F A 0.0000
2360 N A -0.9172
2361 H A 0.0000
2362 M A 0.0000
2363 V A 0.0000
2364 N A 0.0000
2365 N A 0.0000
2366 W A 0.0000
2367 L A 0.0000
2368 P A 0.1939
2369 Y A 0.0000
2370 Q A 0.0000
2371 A A 0.2184
2372 L A 0.4962
2373 A A 0.0000
2374 C A 0.0000
2375 R A 0.0000
2376 I A 0.7067
2377 L A 0.0000
2378 A A 0.0000
2379 R A 0.0954
2380 T A 0.0000
2381 A A 0.0000
2382 F A 0.0000
2383 Y A 0.1011
2384 Q A -0.0587
2385 S A 0.0000
2386 S A -0.2357
2387 G A -0.2096
2388 A A 0.4117
2389 F A 0.5885
2390 G A 0.0000
2391 F A 0.0000
2392 R A 0.0000
2393 D A -0.6018
2394 Q A 0.0000
2395 L A 0.0000
2396 Q A 0.0000
2397 D A -0.1272
2398 T A 0.0000
2399 L A 0.3571
2400 A A 0.4055
2401 F A 0.6255
2406 P A -0.9099
2407 D A -1.9706
2408 L A -0.6386
2409 A A -0.9069
2410 R A -1.6218
2411 T A -1.2295
2412 Q A -1.0056
2413 I A 0.0000
2414 L A -0.8855
2415 R A -1.8497
2416 A A 0.0000
2417 A A 0.0000
2418 G A -0.6998
2419 R A -0.5377
2420 Q A 0.0000
2421 F A 0.0000
2422 P A -1.3855
2423 E A -1.7813
2424 G A 0.0000
2425 D A 0.0000
2426 V A 0.0000
2427 Q A 0.0000
2428 H A 0.0000
2429 W A 1.0882
2430 W A 0.0000
2431 L A 1.0424
2432 P A 0.8976
2433 L A 1.4609
2434 T A 0.5942
2435 G A 0.2049
2436 A A 0.0000
2437 G A 0.0000
2438 V A 0.8944
2439 R A 0.0000
2440 T A 0.0000
2441 T A -0.0894
2442 I A 0.0000
2443 S A 0.0000
2444 D A 0.0000
2445 D A 0.0000
2446 V A 0.0000
2447 V A 0.0000
2448 W A 0.0000
2449 L A 0.0000
2450 A A 0.0000
2451 Y A 0.0035
2452 A A 0.0000
2453 I A 0.0000
2454 N A 0.0000
2455 Q A -0.2715
2456 Y A 0.0000
2457 V A -0.5498
2458 S A -1.1550
2459 A A -1.4689
2460 T A -1.5685
2461 G A -1.2093
2462 D A -0.7000
2463 A A -0.5700
2464 A A -0.9044
2465 I A 0.0000
2466 L A 0.0000
2467 D A -2.6234
2468 E A -2.4111
2469 S A -1.5513
2470 I A -1.2891
2471 P A -1.3547
2472 F A 0.0000
2473 L A -1.9122
2474 K A -2.1424
2475 G A -1.2138
2476 P A -0.5011
2477 A A -0.0718
2478 L A 0.3026
2479 M A 0.3538
2480 P A -0.2563
2481 G A -0.8070
2482 Q A -1.3901
2483 H A -1.1861
2484 D A -0.6007
2485 A A 0.3274
2486 F A 1.4206
2487 F A 0.1179
2488 Q A -1.3686
2489 P A -1.6175
2490 E A -2.4707
2491 T A -1.9219
2492 S A -2.2096
2493 E A -2.8736
2494 R A -2.8608
2495 S A -1.8990
2496 A A -1.4811
2497 T A -1.5085
2498 L A 0.0000
2499 Y A 0.0000
2500 E A -0.8630
2501 H A 0.0000
2502 A A 0.0000
2503 A A 0.0000
2504 L A -0.0611
2505 A A 0.0000
2506 L A 0.0000
2507 D A -0.3358
2508 L A -0.4135
2509 A A 0.0000
2510 I A -0.4155
2511 H A -0.9858
2512 R A -0.8062
2513 T A -0.8985
2514 G A -1.4738
2515 E A -2.2738
2516 N A -1.4448
2517 G A -1.3824
2518 L A 0.0000
2519 P A 0.0000
2520 L A -0.2007
2521 I A 0.0000
2522 L A 0.5127
2523 G A 0.0000
2524 G A 0.0000
2525 D A 0.0000
2526 W A 0.0000
2527 N A -1.1498
2528 D A -1.9908
2529 G A 0.0000
2530 M A 0.0000
2531 N A -0.8086
2532 R A -0.4330
2533 V A 0.0000
2534 G A 0.0000
2535 V A 0.8802
2536 G A -0.0349
2537 G A -0.8257
2538 K A -1.7798
2539 G A 0.0000
2540 T A 0.0000
2541 S A 0.0000
2542 V A 0.0000
2543 W A 0.0000
2544 L A 0.0000
2545 G A 0.0000
2546 W A 0.0000
2547 F A 0.0000
2548 L A 0.0000
2549 A A 0.0000
2550 G A -0.7332
2551 A A 0.0000
2552 L A 0.0000
2553 R A -2.0910
2554 D A -2.4850
2555 F A 0.0000
2556 I A -2.5340
2557 E A -3.6664
2558 I A 0.0000
2559 A A 0.0000
2560 E A -4.1822
2561 K A -3.5609
2562 R A -2.6559
2563 G A -2.6738
2564 D A -2.4801
2565 T A -2.0740
2566 D A -2.7197
2567 R A -2.1256
2568 V A 0.0000
2569 G A -1.8391
2570 K A -1.9179
2571 W A 0.0000
2572 A A -1.5107
2573 S A -1.8768
2574 H A -1.9679
2575 R A -2.3767
2576 E A -3.4255
2577 K A -3.3998
2578 L A 0.0000
2579 R A -2.7291
2580 H A -2.7362
2581 V A 0.0000
2582 L A 0.0000
2583 E A -1.9306
2584 T A -0.8772
2585 A A -0.5932
2586 G A 0.0000
2587 W A -0.6143
2588 D A -0.6553
2589 G A -0.8410
2590 S A -0.9767
2591 Y A -0.9932
2592 Y A 0.0000
2593 R A -0.4734
2594 R A 0.0000
2595 G A 0.0000
2596 Y A -0.6894
2597 F A 0.0000
2598 D A -2.0758
2599 D A -2.6362
2600 G A -1.6280
2601 T A -1.0515
2602 P A -0.5815
2603 L A 0.0000
2604 G A 0.0000
2605 S A 0.0000
2606 A A -0.7702
2607 S A -0.8097
2608 S A -1.1987
2609 E A -2.0765
2610 E A -1.4800
2611 C A 0.0000
2612 Q A -0.8243
2613 I A 0.0000
2614 D A 0.0000
2615 S A 0.0000
2616 L A 0.0000
2617 G A 0.0000
2618 Q A 0.0000
2619 S A 0.0000
2620 W A 0.0000
2621 S A 0.0000
2622 V A 0.0000
2623 L A -0.1545
2624 S A 0.0000
2625 G A -0.8969
2626 E A 0.0000
2627 G A -1.8006
2628 E A -2.9210
2629 E A -3.4067
2630 G A -2.5859
2631 R A -3.0961
2632 S A 0.0000
2633 R A -3.5729
2634 Q A -2.7981
2635 A A 0.0000
2636 M A 0.0000
2637 D A -2.7316
2638 A A -1.6359
2639 V A 0.0000
2640 M A -0.3549
2641 E A -1.4288
2642 H A 0.0000
2643 L A 0.1715
2644 V A 0.4996
2645 D A -1.0568
2646 E A -2.1889
2647 K A -2.4412
2648 T A -1.5265
2649 G A 0.0000
2650 I A 0.0000
2651 I A 0.0000
2652 R A -0.1539
2653 L A 0.0000
2654 F A -0.0219
2655 T A -0.3622
2656 P A -0.5541
2657 P A -0.8198
2658 F A 0.0000
2659 S A -1.2567
2660 R A -2.2287
2661 A A -1.6255
2662 S A -1.5371
2663 H A -1.8018
2664 D A -1.4645
2665 P A -0.7267
2666 G A 0.0000
2667 Y A -0.6762
2668 I A 0.0000
2669 K A -0.9706
2670 G A 0.0000
2671 Y A 0.0000
2672 P A 0.0000
2673 P A -0.4238
2674 G A 0.0000
2675 V A 0.0000
2676 R A -0.2707
2677 E A -0.3102
2678 N A 0.0000
2679 G A 0.0000
2680 G A 0.0000
2681 Q A 0.0000
2682 Y A 0.0784
2683 T A 0.0000
2684 H A -0.0579
2685 A A 0.0000
2686 A A 0.0000
2687 T A 0.0000
2688 W A 0.0000
2689 V A 0.0000
2690 V A 0.0000
2691 L A -0.6761
2692 A A 0.0000
2693 L A 0.0000
2694 A A -2.0585
2695 K A -2.4132
2696 Q A -2.4858
2697 G A -2.4002
2698 R A -3.2339
2699 A A -2.4817
2700 Q A -2.8000
2701 E A -2.6165
2702 A A 0.0000
2703 W A -1.7753
2704 N A -2.2467
2705 C A 0.0000
2706 F A 0.0000
2707 K A -1.4782
2708 L A -0.9923
2709 L A 0.0000
2710 N A 0.0000
2711 P A 0.0000
2712 V A 0.0000
2713 N A -1.6128
2714 H A -0.9966
2715 A A -1.1862
2716 L A 0.0000
2717 D A -1.7408
2718 A A -1.1042
2719 A A -0.8568
2720 S A -1.0732
2721 S A -1.4730
2722 E A -2.1061
2723 T A -1.1929
2724 Y A 0.0000
2725 R A -1.1440
2726 V A 0.0000
2727 E A 0.0000
2728 P A 0.0000
2729 Y A 0.0000
2730 V A 0.0000
2731 V A 0.0000
2732 T A 0.0000
2733 A A 0.0739
2734 D A 0.0000
2735 V A 0.0000
2736 Y A 0.0000
2737 G A 0.0000
2738 E A -1.1477
2739 G A -0.7953
2740 A A -0.2603
2741 Y A -0.0837
2742 A A -0.6929
2743 G A -0.9540
2744 R A -0.6932
2745 G A 0.0000
2746 G A -0.1106
2747 W A 0.1202
2748 S A 0.0000
2749 W A 0.0000
2750 Y A 0.1272
2751 T A 0.0000
2752 G A -0.2473
2753 S A 0.0000
2754 A A 0.0000
2755 G A -0.0144
2756 W A 0.0000
2757 L A 0.0000
2758 Y A 0.0811
2759 R A -0.1740
2760 A A 0.0000
2761 A A 0.0000
2762 V A -0.0786
2763 E A -0.7427
2764 G A -0.9587
2765 I A 0.0000
2766 L A 0.0000
2767 G A 0.0000
2768 I A 0.0000
2769 T A -1.3065
2770 R A -2.2074
2771 T A -1.9860
2772 D A -2.9088
2773 G A -2.4583
2774 K A -2.7140
2775 L A 0.0000
2776 H A -1.4408
2777 V A -0.1816
2778 S A -0.2669
2779 P A -0.6083
2780 S A -1.3404
2781 L A -1.3052
2782 P A 0.0000
2783 E A -3.0231
2784 D A -2.8355
2785 W A 0.0000
2786 S A -1.9267
2787 G A -1.4252
2788 F A 0.0000
2789 S A -0.7957
2790 I A 0.0000
2791 R A -2.6840
2792 I A 0.0000
2793 T A -1.9015
2794 L A -1.9178
2795 D A -2.4531
2796 G A -2.2170
2797 K A -2.8875
2798 A A -2.1705
2799 R A -2.5615
2800 D A -2.6472
2801 I A 0.0000
2802 A A -0.8031
2803 V A 0.0000
2804 S A -1.6052
2805 R A -2.9568
2806 K A -2.5055
2807 A A -0.9025
2808 G A -0.0875
2809 T A 0.1641
2810 A A -0.5400
2811 D A -1.1348
2812 V A 1.1547
2813 S A 1.0157
2814 V A 1.4837
2815 S A 0.7985
2816 V A 0.5433
2817 D A -0.7634
2818 G A -0.6079
1536 G A -2.4900
1537 K A -3.5466
1538 E A -3.7157
1539 Q A -2.8611
1540 A A -2.4605
1541 D A -2.6129
1542 L A -0.4820
1543 L A 0.5680
1544 R A -1.1035
1545 A A -0.6594
Download PDB file
View in 3Dmol

Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.504 4.6155 View CSV PDB
4.5 -0.5689 4.6155 View CSV PDB
5.0 -0.6493 4.6155 View CSV PDB
5.5 -0.7323 4.6155 View CSV PDB
6.0 -0.8063 4.6155 View CSV PDB
6.5 -0.8633 4.6155 View CSV PDB
7.0 -0.902 4.6155 View CSV PDB
7.5 -0.9274 4.6155 View CSV PDB
8.0 -0.9444 4.6155 View CSV PDB
8.5 -0.9535 4.6155 View CSV PDB
9.0 -0.9526 4.6155 View CSV PDB