Chain sequence(s) |
A: STKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFYMPKKATELKHLQCLEEELKPLEEVLNLAQNFHLRPRDLISNINVIVLELKGFMCEYADETATIVEFLNRWITFCQSIISTLT
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | CS125A |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.764796 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:01) [INFO] FoldX: Building mutant model (00:02:19) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:02:23) [INFO] Main: Simulation completed successfully. (00:02:24) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
6 | S | A | -1.4106 | |
7 | T | A | -1.4170 | |
8 | K | A | -2.4881 | |
9 | K | A | -2.6996 | |
10 | T | A | -1.7434 | |
11 | Q | A | -1.5910 | |
12 | L | A | -1.4080 | |
13 | Q | A | -1.5353 | |
14 | L | A | 0.0000 | |
15 | E | A | -1.7170 | |
16 | H | A | -1.2981 | |
17 | L | A | 0.0000 | |
18 | L | A | 0.0000 | |
19 | L | A | 0.6864 | |
20 | D | A | -0.0626 | |
21 | L | A | 0.0000 | |
22 | Q | A | -0.3265 | |
23 | M | A | -0.1290 | |
24 | I | A | 0.0000 | |
25 | L | A | -1.1554 | |
26 | N | A | -1.8913 | |
27 | G | A | -1.7066 | |
28 | I | A | 0.0000 | |
29 | N | A | -2.5559 | |
30 | N | A | -2.8191 | |
31 | Y | A | -2.5738 | |
32 | K | A | -2.9194 | |
33 | N | A | -2.8991 | |
34 | P | A | -1.9819 | |
35 | K | A | -2.0144 | |
36 | L | A | -1.8671 | |
37 | T | A | -1.4465 | |
38 | R | A | -1.9322 | |
39 | M | A | 0.0000 | |
40 | L | A | -0.2460 | |
41 | T | A | -0.4306 | |
42 | F | A | -0.3555 | |
43 | K | A | -1.3007 | |
44 | F | A | 0.0000 | |
45 | Y | A | -0.4809 | |
46 | M | A | 0.0000 | |
47 | P | A | 0.0000 | |
48 | K | A | -2.9853 | |
49 | K | A | -2.9015 | |
50 | A | A | -2.1554 | |
51 | T | A | -1.4588 | |
52 | E | A | -2.3154 | |
53 | L | A | -1.7213 | |
54 | K | A | -1.5884 | |
55 | H | A | -1.7561 | |
56 | L | A | 0.0000 | |
57 | Q | A | -0.6860 | |
58 | C | A | 0.0000 | |
59 | L | A | 0.0000 | |
60 | E | A | -1.0442 | |
61 | E | A | -1.6692 | |
62 | E | A | 0.0000 | |
63 | L | A | 0.0000 | |
64 | K | A | -2.7672 | |
65 | P | A | -1.7714 | |
66 | L | A | 0.0000 | |
67 | E | A | -2.2969 | |
68 | E | A | -2.0320 | |
69 | V | A | 0.0000 | |
70 | L | A | 0.0000 | |
71 | N | A | -1.2789 | |
72 | L | A | 0.5613 | |
73 | A | A | 0.0000 | |
74 | Q | A | -1.3155 | |
77 | N | A | -1.8484 | |
78 | F | A | -1.4360 | |
79 | H | A | -1.2317 | |
80 | L | A | -1.2413 | |
81 | R | A | -2.8893 | |
82 | P | A | -2.4515 | |
83 | R | A | -3.2783 | |
84 | D | A | -2.2007 | |
85 | L | A | 0.0000 | |
86 | I | A | 0.0000 | |
87 | S | A | -1.0997 | |
88 | N | A | -0.8535 | |
89 | I | A | 0.0000 | |
90 | N | A | -0.0971 | |
91 | V | A | 1.2116 | |
92 | I | A | 0.0000 | |
93 | V | A | 0.0000 | |
94 | L | A | 0.3636 | |
95 | E | A | -1.0487 | |
96 | L | A | 0.0000 | |
97 | K | A | -1.5718 | |
98 | G | A | -1.1452 | |
103 | F | A | 1.8906 | |
104 | M | A | 1.4008 | |
105 | C | A | -0.6155 | |
106 | E | A | -1.9575 | |
107 | Y | A | -1.6346 | |
108 | A | A | -2.2752 | |
109 | D | A | -2.8563 | |
110 | E | A | -2.8189 | |
111 | T | A | -1.5866 | |
112 | A | A | -1.2413 | |
113 | T | A | -0.5757 | |
114 | I | A | 0.0000 | |
115 | V | A | -0.9376 | |
116 | E | A | -1.9659 | |
117 | F | A | 0.0000 | |
118 | L | A | 0.0000 | |
119 | N | A | -1.8839 | |
120 | R | A | -1.7354 | |
121 | W | A | 0.0000 | |
122 | I | A | 0.0000 | |
123 | T | A | -0.9068 | |
124 | F | A | 0.0000 | |
125 | S | A | 0.0000 | mutated: CS125A |
126 | Q | A | -1.1227 | |
127 | S | A | -0.6123 | |
128 | I | A | -0.4965 | |
129 | I | A | -0.4925 | |
130 | S | A | -0.2373 | |
131 | T | A | 0.0022 | |
132 | L | A | 0.0832 | |
133 | T | A | -0.1586 |