| Chain sequence(s) |
A: QVQLQESGPGLVKPSQTLSLTCTVSGGSISSGDYYWSWIRQPPGCKGLEWIGYIYYSGSTDYNPSLKSRVTMSVDTSKNQFSLKVNSVTAADTAVYYCARVSIFGVGTFDYWGQGTLVTVSSAAGGGGSGGGGSGGGGSDIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGCQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYGSTPLTFGGGTKAEIKAGGGGSDVQLVQSGAEVKKPGASVKVSCKASGYTFTRYTMHWVRQAPGCQGLEWIGYINPSRGYTNYADSVKGRFTITTDKSTSTAYMELSSLRSEDTATYYCARYYDDHYCLDYWGQGTTVTVSSAAGGGGSGGGGSGGGGSDIVLTQSPATLSLSPGERATLSCRASQSVSYMNWYQQKPGCKAPKRWIYDTSKVASGVPARFSGSGSGTDYSLTINSLEAEDAATYYCQQWSSNPLTFGGGTKVEIKAGSHHHHHH
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| pH calculations | Yes |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:00)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:00)
[INFO] PDB-Info: The input structure is globular. Max score is recommended for pH analysis. (00:00:01)
[INFO] FoldX: Starting FoldX energy minimization (00:00:01)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:05:12)
[INFO] agg3D: Running pKa-ANI on
/STORAGE/DATA/lcbio/aggreskan/8a5828cbffd27f8/tmp/folded.pdb (00:05:12)
[INFO] Main: Simulation completed successfully. (00:06:56)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 1 | Q | A | -1.6709 | |
| 2 | V | A | 0.0000 | |
| 3 | Q | A | -1.9371 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -1.6300 | |
| 6 | E | A | 0.0000 | |
| 7 | S | A | -0.7507 | |
| 8 | G | A | -0.6342 | |
| 9 | P | A | -0.3446 | |
| 10 | G | A | -0.2644 | |
| 11 | L | A | 0.1473 | |
| 12 | V | A | 0.0000 | |
| 13 | K | A | -1.5724 | |
| 14 | P | A | -1.1951 | |
| 15 | S | A | -1.2919 | |
| 16 | Q | A | -1.7254 | |
| 17 | T | A | -1.3452 | |
| 18 | L | A | 0.0000 | |
| 19 | S | A | -0.7735 | |
| 20 | L | A | 0.0000 | |
| 21 | T | A | -0.5939 | |
| 22 | C | A | 0.0000 | |
| 23 | T | A | -1.2312 | |
| 24 | V | A | 0.0000 | |
| 25 | S | A | -1.5528 | |
| 26 | G | A | -1.4261 | |
| 27 | G | A | -1.0599 | |
| 28 | S | A | -0.6900 | |
| 29 | I | A | 0.0000 | |
| 30 | S | A | -0.2667 | |
| 31 | S | A | -0.3186 | |
| 32 | G | A | -0.1366 | |
| 33 | D | A | -0.0166 | |
| 34 | Y | A | 0.6474 | |
| 35 | Y | A | 0.6820 | |
| 36 | W | A | 0.0000 | |
| 37 | S | A | 0.0000 | |
| 38 | W | A | 0.0000 | |
| 39 | I | A | 0.0000 | |
| 40 | R | A | 0.0000 | |
| 41 | Q | A | 0.0000 | |
| 42 | P | A | -0.7690 | |
| 43 | P | A | -0.6315 | |
| 44 | G | A | -0.8421 | |
| 45 | C | A | -1.1155 | |
| 46 | K | A | -1.9094 | |
| 47 | G | A | -1.1711 | |
| 48 | L | A | 0.0000 | |
| 49 | E | A | -0.6893 | |
| 50 | W | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | G | A | 0.0000 | |
| 53 | Y | A | 0.1035 | |
| 54 | I | A | 0.0000 | |
| 55 | Y | A | 0.3346 | |
| 56 | Y | A | 0.3722 | |
| 57 | S | A | -0.0051 | |
| 58 | G | A | -0.2034 | |
| 59 | S | A | -0.2909 | |
| 60 | T | A | -0.3575 | |
| 61 | D | A | -0.9643 | |
| 62 | Y | A | -0.8639 | |
| 63 | N | A | -0.9371 | |
| 64 | P | A | -1.1703 | |
| 65 | S | A | -1.0388 | |
| 66 | L | A | 0.0000 | |
| 67 | K | A | -2.1098 | |
| 68 | S | A | -1.3751 | |
| 69 | R | A | -1.4489 | |
| 70 | V | A | 0.0000 | |
| 71 | T | A | -0.8298 | |
| 72 | M | A | 0.0000 | |
| 73 | S | A | -0.1681 | |
| 74 | V | A | -0.3178 | |
| 75 | D | A | -1.2050 | |
| 76 | T | A | -1.0850 | |
| 77 | S | A | -1.3915 | |
| 78 | K | A | -2.2690 | |
| 79 | N | A | -1.6332 | |
| 80 | Q | A | -1.3868 | |
| 81 | F | A | 0.0000 | |
| 82 | S | A | -0.3679 | |
| 83 | L | A | 0.0000 | |
| 84 | K | A | -0.9353 | |
| 85 | V | A | 0.0000 | |
| 86 | N | A | -1.4860 | |
| 87 | S | A | -1.3166 | |
| 88 | V | A | 0.0000 | |
| 89 | T | A | -0.5988 | |
| 90 | A | A | -0.2451 | |
| 91 | A | A | -0.1609 | |
| 92 | D | A | 0.0000 | |
| 93 | T | A | 0.0000 | |
| 94 | A | A | 0.0000 | |
| 95 | V | A | 0.0000 | |
| 96 | Y | A | 0.0000 | |
| 97 | Y | A | 0.0000 | |
| 98 | C | A | 0.0000 | |
| 99 | A | A | 0.0000 | |
| 100 | R | A | 0.0000 | |
| 101 | V | A | 0.7029 | |
| 102 | S | A | 0.0000 | |
| 103 | I | A | 1.4468 | |
| 104 | F | A | 1.9084 | |
| 105 | G | A | 0.5441 | |
| 106 | V | A | 0.2791 | |
| 107 | G | A | 0.7775 | |
| 108 | T | A | 0.0000 | |
| 109 | F | A | 0.0000 | |
| 110 | D | A | -0.2841 | |
| 111 | Y | A | -0.3160 | |
| 112 | W | A | -0.4972 | |
| 113 | G | A | 0.0000 | |
| 114 | Q | A | -1.3832 | |
| 115 | G | A | -0.7529 | |
| 116 | T | A | -0.4758 | |
| 117 | L | A | 0.0412 | |
| 118 | V | A | 0.0000 | |
| 119 | T | A | 0.0000 | |
| 120 | V | A | 0.0000 | |
| 121 | S | A | 0.0000 | |
| 122 | S | A | -0.9529 | |
| 123 | A | A | -0.6800 | |
| 124 | A | A | -0.6698 | |
| 125 | G | A | -0.8519 | |
| 126 | G | A | -1.1054 | |
| 127 | G | A | -1.1429 | |
| 128 | G | A | -1.2340 | |
| 129 | S | A | -1.0719 | |
| 130 | G | A | -1.1756 | |
| 131 | G | A | -1.2355 | |
| 132 | G | A | -1.2176 | |
| 133 | G | A | -1.1950 | |
| 134 | S | A | -1.1141 | |
| 135 | G | A | -1.1111 | |
| 136 | G | A | -1.3766 | |
| 137 | G | A | -1.2338 | |
| 138 | G | A | -1.2405 | |
| 139 | S | A | -0.7848 | |
| 140 | D | A | -0.7442 | |
| 141 | I | A | 0.0113 | |
| 142 | V | A | 1.0048 | |
| 143 | M | A | 0.0000 | |
| 144 | T | A | -0.6174 | |
| 145 | Q | A | -0.7064 | |
| 146 | S | A | -0.7731 | |
| 147 | P | A | -0.3820 | |
| 148 | A | A | -0.3722 | |
| 149 | T | A | -0.4270 | |
| 150 | L | A | -0.3177 | |
| 151 | S | A | -0.5419 | |
| 152 | L | A | -0.7606 | |
| 153 | S | A | -1.1734 | |
| 154 | P | A | -1.7285 | |
| 155 | G | A | -1.5732 | |
| 156 | E | A | -2.0539 | |
| 157 | R | A | -2.5125 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.6376 | |
| 160 | L | A | 0.0000 | |
| 161 | S | A | -0.9048 | |
| 162 | C | A | 0.0000 | |
| 163 | R | A | -2.3565 | |
| 164 | A | A | 0.0000 | |
| 165 | S | A | -0.8408 | |
| 166 | Q | A | -1.5436 | |
| 167 | S | A | -1.2322 | |
| 168 | V | A | 0.0000 | |
| 169 | S | A | -0.4589 | |
| 170 | S | A | -0.0893 | |
| 171 | Y | A | 0.6677 | |
| 172 | L | A | 0.0000 | |
| 173 | A | A | 0.0000 | |
| 174 | W | A | 0.0000 | |
| 175 | Y | A | 0.0000 | |
| 176 | Q | A | 0.0000 | |
| 177 | Q | A | 0.0000 | |
| 178 | K | A | -1.2486 | |
| 179 | P | A | -0.5536 | |
| 180 | G | A | -0.6768 | |
| 181 | C | A | -0.9218 | |
| 182 | Q | A | -1.5528 | |
| 183 | A | A | -0.9732 | |
| 184 | P | A | 0.0000 | |
| 185 | R | A | -1.3232 | |
| 186 | L | A | 0.0000 | |
| 187 | L | A | 0.0000 | |
| 188 | I | A | 0.0000 | |
| 189 | Y | A | -0.7099 | |
| 190 | D | A | -0.9200 | |
| 191 | A | A | 0.0000 | |
| 192 | S | A | -1.2486 | |
| 193 | N | A | -1.9643 | |
| 194 | R | A | -1.8410 | |
| 195 | A | A | -1.2265 | |
| 196 | T | A | -0.7413 | |
| 197 | G | A | -0.6832 | |
| 198 | I | A | 0.0000 | |
| 199 | P | A | -0.4474 | |
| 200 | A | A | -0.3737 | |
| 201 | R | A | -0.6651 | |
| 202 | F | A | 0.0000 | |
| 203 | S | A | -0.7358 | |
| 204 | G | A | 0.0000 | |
| 205 | S | A | -0.8632 | |
| 206 | G | A | -1.1222 | |
| 207 | S | A | -0.9638 | |
| 208 | G | A | -1.0451 | |
| 209 | T | A | -1.7555 | |
| 210 | D | A | -2.1690 | |
| 211 | F | A | 0.0000 | |
| 212 | T | A | -0.7791 | |
| 213 | L | A | 0.0000 | |
| 214 | T | A | -0.5807 | |
| 215 | I | A | 0.0000 | |
| 216 | S | A | -1.2826 | |
| 217 | S | A | -1.5827 | |
| 218 | L | A | 0.0000 | |
| 219 | E | A | -2.2367 | |
| 220 | P | A | -1.9151 | |
| 221 | E | A | -2.4344 | |
| 222 | D | A | 0.0000 | |
| 223 | F | A | 0.0000 | |
| 224 | A | A | 0.0000 | |
| 225 | V | A | -0.4857 | |
| 226 | Y | A | 0.0000 | |
| 227 | Y | A | 0.0000 | |
| 228 | C | A | 0.0000 | |
| 229 | H | A | 0.0000 | |
| 230 | Q | A | 0.0000 | |
| 231 | Y | A | 0.2623 | |
| 232 | G | A | 0.0260 | |
| 233 | S | A | -0.1651 | |
| 234 | T | A | -0.3824 | |
| 235 | P | A | -0.4846 | |
| 236 | L | A | 0.0000 | |
| 237 | T | A | 0.2042 | |
| 238 | F | A | 0.2690 | |
| 239 | G | A | 0.0000 | |
| 240 | G | A | -0.7306 | |
| 241 | G | A | -0.7842 | |
| 242 | T | A | 0.0000 | |
| 243 | K | A | -1.0232 | |
| 244 | A | A | 0.0000 | |
| 245 | E | A | -0.7348 | |
| 246 | I | A | 0.0000 | |
| 247 | K | A | -0.9663 | |
| 248 | A | A | -0.7128 | |
| 249 | G | A | -0.8095 | |
| 250 | G | A | -0.7836 | |
| 251 | G | A | -1.0086 | |
| 252 | G | A | -1.2074 | |
| 253 | S | A | -1.0677 | |
| 254 | D | A | -1.9205 | |
| 255 | V | A | -0.4856 | |
| 256 | Q | A | -0.5232 | |
| 257 | L | A | 0.0000 | |
| 258 | V | A | 0.0693 | |
| 259 | Q | A | 0.0000 | |
| 260 | S | A | -0.4126 | |
| 261 | G | A | -0.5599 | |
| 262 | A | A | 0.0000 | |
| 263 | E | A | -0.8077 | |
| 264 | V | A | -0.5344 | |
| 265 | K | A | -1.6275 | |
| 266 | K | A | -2.4003 | |
| 267 | P | A | -2.1736 | |
| 268 | G | A | -1.6045 | |
| 269 | A | A | -1.2637 | |
| 270 | S | A | -1.2689 | |
| 271 | V | A | 0.0000 | |
| 272 | K | A | -2.1166 | |
| 273 | V | A | 0.0000 | |
| 274 | S | A | -0.5332 | |
| 275 | C | A | 0.0000 | |
| 276 | K | A | -0.3439 | |
| 277 | A | A | 0.0000 | |
| 278 | S | A | -0.5906 | |
| 279 | G | A | -0.8252 | |
| 280 | Y | A | -0.5580 | |
| 281 | T | A | -0.5056 | |
| 282 | F | A | 0.0000 | |
| 283 | T | A | -1.5648 | |
| 284 | R | A | -1.9747 | |
| 285 | Y | A | -1.0348 | |
| 286 | T | A | 0.0000 | |
| 287 | M | A | 0.0000 | |
| 288 | H | A | 0.0000 | |
| 289 | W | A | 0.0000 | |
| 290 | V | A | 0.0000 | |
| 291 | R | A | -0.5845 | |
| 292 | Q | A | 0.0000 | |
| 293 | A | A | -1.0418 | |
| 294 | P | A | -0.9758 | |
| 295 | G | A | -0.9202 | |
| 296 | C | A | -1.0036 | |
| 297 | Q | A | -1.5413 | |
| 298 | G | A | -1.1201 | |
| 299 | L | A | 0.0000 | |
| 300 | E | A | -0.9331 | |
| 301 | W | A | 0.0000 | |
| 302 | I | A | 0.0000 | |
| 303 | G | A | 0.0000 | |
| 304 | Y | A | 0.0000 | |
| 305 | I | A | 0.0000 | |
| 306 | N | A | -0.9636 | |
| 307 | P | A | 0.0000 | |
| 308 | S | A | -1.6352 | |
| 309 | R | A | -1.8763 | |
| 310 | G | A | -1.0084 | |
| 311 | Y | A | -0.1042 | |
| 312 | T | A | -0.2393 | |
| 313 | N | A | -0.9588 | |
| 314 | Y | A | -1.2801 | |
| 315 | A | A | -1.6958 | |
| 316 | D | A | -2.6988 | |
| 317 | S | A | -1.8848 | |
| 318 | V | A | 0.0000 | |
| 319 | K | A | -2.7555 | |
| 320 | G | A | -1.7636 | |
| 321 | R | A | -1.4041 | |
| 322 | F | A | 0.0000 | |
| 323 | T | A | -1.0656 | |
| 324 | I | A | 0.0000 | |
| 325 | T | A | -0.4642 | |
| 326 | T | A | -0.9588 | |
| 327 | D | A | -1.6094 | |
| 328 | K | A | -2.1268 | |
| 329 | S | A | -1.2449 | |
| 330 | T | A | -1.0038 | |
| 331 | S | A | -1.0965 | |
| 332 | T | A | 0.0000 | |
| 333 | A | A | 0.0000 | |
| 334 | Y | A | -0.6251 | |
| 335 | M | A | 0.0000 | |
| 336 | E | A | -1.7604 | |
| 337 | L | A | 0.0000 | |
| 338 | S | A | -1.2569 | |
| 339 | S | A | -1.2751 | |
| 340 | L | A | 0.0000 | |
| 341 | R | A | -3.0103 | |
| 342 | S | A | -2.2484 | |
| 343 | E | A | -2.6860 | |
| 344 | D | A | 0.0000 | |
| 345 | T | A | -1.1292 | |
| 346 | A | A | 0.0000 | |
| 347 | T | A | -0.1315 | |
| 348 | Y | A | 0.0000 | |
| 349 | Y | A | 0.0000 | |
| 350 | C | A | 0.0000 | |
| 351 | A | A | 0.0000 | |
| 352 | R | A | 0.0000 | |
| 353 | Y | A | 0.0000 | |
| 354 | Y | A | -1.0846 | |
| 355 | D | A | -2.4340 | |
| 356 | D | A | -2.4761 | |
| 357 | H | A | -1.4379 | |
| 358 | Y | A | -0.3565 | |
| 359 | C | A | 0.0000 | |
| 360 | L | A | 0.0000 | |
| 361 | D | A | 0.0000 | |
| 362 | Y | A | 0.5369 | |
| 363 | W | A | 0.2301 | |
| 364 | G | A | 0.0000 | |
| 365 | Q | A | -0.4572 | |
| 366 | G | A | 0.0000 | |
| 367 | T | A | 0.0000 | |
| 368 | T | A | -0.2203 | |
| 369 | V | A | 0.0000 | |
| 370 | T | A | 0.0000 | |
| 371 | V | A | 0.0000 | |
| 372 | S | A | -1.0556 | |
| 373 | S | A | -1.3380 | |
| 374 | A | A | -0.6574 | |
| 375 | A | A | -0.6344 | |
| 376 | G | A | -0.9670 | |
| 377 | G | A | -1.1036 | |
| 378 | G | A | -1.1434 | |
| 379 | G | A | -1.2212 | |
| 380 | S | A | -1.0670 | |
| 381 | G | A | -1.3685 | |
| 382 | G | A | -1.4784 | |
| 383 | G | A | -1.2163 | |
| 384 | G | A | -1.4369 | |
| 385 | S | A | -1.1302 | |
| 386 | G | A | -1.1705 | |
| 387 | G | A | -1.6809 | |
| 388 | G | A | -1.2925 | |
| 389 | G | A | -1.5861 | |
| 390 | S | A | -1.1844 | |
| 391 | D | A | -1.4412 | |
| 392 | I | A | 0.0000 | |
| 393 | V | A | 0.8078 | |
| 394 | L | A | 0.0000 | |
| 395 | T | A | -0.6404 | |
| 396 | Q | A | -0.6779 | |
| 397 | S | A | -0.7424 | |
| 398 | P | A | -0.3547 | |
| 399 | A | A | -0.3949 | |
| 400 | T | A | -0.6215 | |
| 401 | L | A | -0.5688 | |
| 402 | S | A | -0.9237 | |
| 403 | L | A | -1.3215 | |
| 404 | S | A | -1.6576 | |
| 405 | P | A | -1.9900 | |
| 406 | G | A | -1.9711 | |
| 407 | E | A | -2.5001 | |
| 408 | R | A | -2.9600 | |
| 409 | A | A | 0.0000 | |
| 410 | T | A | -0.7673 | |
| 411 | L | A | 0.0000 | |
| 412 | S | A | -0.9582 | |
| 413 | C | A | 0.0000 | |
| 414 | R | A | -2.4194 | |
| 415 | A | A | 0.0000 | |
| 416 | S | A | -0.9662 | |
| 417 | Q | A | -1.6799 | |
| 418 | S | A | -1.4292 | |
| 419 | V | A | 0.0000 | |
| 420 | S | A | -0.4601 | |
| 421 | Y | A | 0.0000 | |
| 422 | M | A | 0.0000 | |
| 423 | N | A | 0.0000 | |
| 424 | W | A | 0.0000 | |
| 425 | Y | A | 0.0000 | |
| 426 | Q | A | 0.0000 | |
| 427 | Q | A | 0.0000 | |
| 428 | K | A | -1.9493 | |
| 429 | P | A | -1.2025 | |
| 430 | G | A | -1.1840 | |
| 431 | C | A | -1.0021 | |
| 432 | K | A | -1.7468 | |
| 433 | A | A | -0.8879 | |
| 434 | P | A | 0.0000 | |
| 435 | K | A | -1.2318 | |
| 436 | R | A | -0.4653 | |
| 437 | W | A | 0.0000 | |
| 438 | I | A | 0.0000 | |
| 439 | Y | A | -0.3687 | |
| 440 | D | A | -0.8514 | |
| 441 | T | A | -0.7793 | |
| 442 | S | A | -1.0011 | |
| 443 | K | A | -1.4458 | |
| 444 | V | A | -0.3422 | |
| 445 | A | A | 0.0000 | |
| 446 | S | A | -0.4924 | |
| 447 | G | A | -0.4804 | |
| 448 | V | A | 0.0000 | |
| 449 | P | A | -0.1675 | |
| 450 | A | A | -0.1740 | |
| 451 | R | A | -0.8693 | |
| 452 | F | A | 0.0000 | |
| 453 | S | A | -0.5453 | |
| 454 | G | A | -0.5830 | |
| 455 | S | A | -0.9026 | |
| 456 | G | A | -1.1360 | |
| 457 | S | A | -1.0857 | |
| 458 | G | A | -1.2923 | |
| 459 | T | A | -1.8448 | |
| 460 | D | A | -2.3026 | |
| 461 | Y | A | 0.0000 | |
| 462 | S | A | -0.8572 | |
| 463 | L | A | 0.0000 | |
| 464 | T | A | -0.7853 | |
| 465 | I | A | 0.0000 | |
| 466 | N | A | -2.0857 | |
| 467 | S | A | -2.1036 | |
| 468 | L | A | 0.0000 | |
| 469 | E | A | -2.4744 | |
| 470 | A | A | -1.8122 | |
| 471 | E | A | -2.3257 | |
| 472 | D | A | 0.0000 | |
| 473 | A | A | -1.6394 | |
| 474 | A | A | 0.0000 | |
| 475 | T | A | -1.0125 | |
| 476 | Y | A | 0.0000 | |
| 477 | Y | A | 0.0000 | |
| 478 | C | A | 0.0000 | |
| 479 | Q | A | 0.0000 | |
| 480 | Q | A | 0.0000 | |
| 481 | W | A | -0.0923 | |
| 482 | S | A | -0.4437 | |
| 483 | S | A | -1.1215 | |
| 484 | N | A | -1.6204 | |
| 485 | P | A | -1.4226 | |
| 486 | L | A | 0.0000 | |
| 487 | T | A | -0.1113 | |
| 488 | F | A | 0.1822 | |
| 489 | G | A | 0.0000 | |
| 490 | G | A | -0.7391 | |
| 491 | G | A | -0.7746 | |
| 492 | T | A | 0.0000 | |
| 493 | K | A | -1.3757 | |
| 494 | V | A | 0.0000 | |
| 495 | E | A | -1.5947 | |
| 496 | I | A | -1.5958 | |
| 497 | K | A | -1.7876 | |
| 498 | A | A | -1.1950 | |
| 499 | G | A | -1.3916 | |
| 500 | S | A | -1.6342 | |
| 501 | H | A | -2.1800 | |
| 502 | H | A | -2.5860 | |
| 503 | H | A | -2.7827 | |
| 504 | H | A | -2.7554 | |
| 505 | H | A | -2.4346 | |
| 506 | H | A | -1.9376 |
Calculations for various pH values
This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.
pH |
Average A4D Score |
Max A4D Score |
|||
| 4.0 | -0.7372 | 4.8512 | View | CSV | PDB |
| 4.5 | -0.7669 | 4.8169 | View | CSV | PDB |
| 5.0 | -0.7998 | 4.7717 | View | CSV | PDB |
| 5.5 | -0.8272 | 4.7213 | View | CSV | PDB |
| 6.0 | -0.8405 | 4.6691 | View | CSV | PDB |
| 6.5 | -0.8365 | 4.6163 | View | CSV | PDB |
| 7.0 | -0.8201 | 4.5634 | View | CSV | PDB |
| 7.5 | -0.7985 | 4.5107 | View | CSV | PDB |
| 8.0 | -0.7745 | 4.4589 | View | CSV | PDB |
| 8.5 | -0.7479 | 4.4099 | View | CSV | PDB |
| 9.0 | -0.7173 | 4.3679 | View | CSV | PDB |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine