Project name: 184

Status: done

Started: 2025-03-12 02:43:37
Chain sequence(s) A: PADPAPLARYYRALGEERFRELLLARFSQLLQKAPFEELLKLVEELLELAKRCVADPALPGCDDSLRTLIGSRICKVPDLESRYGSLAECCKLSEPEWWNCFLSHRDVDPGLPKEEIDPEEECARYKEDPEEFRLRFIYRVARRYPFIDPTLLLYFADRYVGIYEECCEEDDIEACLLPKLEELEKEIERACLESLLDYYLIHHFGEEALRRKLVVELAKKFPKADFETIKELVEKRTRVIVLNANGELLEATVLALELTDWICSNIDKISSKLEECCKKEPLERYYCILNVENDEVPKDVEPLEKEFADDPNVCEKYKKDKQGFLDRFAYEYARRNPDLANILLMRLVERYEKALEECCKKPDPLSCLKGVFKELDALVERYRPVVERLCELYRRLGPEGFTVYLARDFTRKVPRVPVDVLVRFSRRLGELGELCCGLPEEQRLPCFLDYAYLVLTELCVLCLRDPVDPRVEEVCTSSPWDMLEGFLALEPSDDYEPEPFDESKFTFGPEICELSPEERFEVRLRFLVELLRTYPNVSDEKLDKILELFDKFIEECCSSKDKEKCFKELNPKFIKKVKELCS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:01)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:02)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:05)
Show buried residues

Minimal score value
-4.5688
Maximal score value
0.2936
Average score
-1.2568
Total score value
-732.7413

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 P A -0.4884
2 A A -0.7540
3 D A -1.3449
4 P A -1.4539
5 A A 0.0000
6 P A -1.2576
7 L A 0.0000
8 A A 0.0000
9 R A -1.3700
10 Y A 0.0000
11 Y A -1.5463
12 R A -2.1479
13 A A -1.1207
14 L A -1.1497
15 G A -1.8425
16 E A -2.4669
17 E A -2.6631
18 R A -1.4905
19 F A 0.0000
20 R A -1.3195
21 E A 0.0000
22 L A 0.0000
23 L A 0.0000
24 L A 0.0000
25 A A 0.0000
26 R A 0.0000
27 F A 0.0000
28 S A 0.0000
29 Q A 0.0000
30 L A 0.0000
31 L A 0.0000
32 Q A 0.0000
33 K A -1.9442
34 A A 0.0000
35 P A -1.1851
36 F A 0.0000
37 E A -2.3076
38 E A -1.6893
39 L A 0.0000
40 L A -1.7534
41 K A -2.6803
42 L A -1.8577
43 V A 0.0000
44 E A -2.4075
45 E A -2.7573
46 L A 0.0000
47 L A 0.0000
48 E A -2.7846
49 L A 0.0000
50 A A 0.0000
51 K A -2.2212
52 R A -2.2108
53 C A 0.0000
54 V A -1.0482
55 A A -0.7980
56 D A -1.1439
57 P A -1.1845
58 A A -0.5792
59 L A -0.3700
60 P A -0.7517
61 G A -1.0354
62 C A 0.0000
63 D A -2.3249
64 D A -1.7590
65 S A -1.0405
66 L A -0.6602
67 R A -0.8364
68 T A -0.6608
69 L A 0.0000
70 I A 0.0000
71 G A 0.0000
72 S A -0.5464
73 R A -0.9605
74 I A 0.0000
75 C A -1.5082
76 K A -1.9599
77 V A 0.0000
78 P A -1.9316
79 D A -2.9837
80 L A 0.0000
81 E A -3.1841
82 S A -2.1790
83 R A -2.2755
84 Y A -1.8687
85 G A -1.8318
86 S A -1.4121
87 L A 0.0000
88 A A -2.2655
89 E A -2.4618
90 C A 0.0000
91 C A -1.0943
92 K A -1.8987
93 L A -1.2076
94 S A -1.4474
95 E A -2.3033
96 P A -2.1366
97 E A -2.7982
98 W A -2.0343
99 W A 0.0000
100 N A -2.1882
101 C A -1.4519
102 F A 0.0000
103 L A 0.0000
104 S A -0.8713
105 H A -0.7535
106 R A 0.0000
107 D A -0.9104
108 V A 0.0000
109 D A -1.0336
110 P A -1.0284
111 G A -1.1390
112 L A -1.3169
113 P A -1.8197
114 K A -3.0292
115 E A -3.3550
116 E A -2.8306
117 I A -1.4949
118 D A -2.4533
119 P A 0.0000
120 E A -3.1625
121 E A -3.2575
122 E A 0.0000
123 C A 0.0000
124 A A -2.7516
125 R A -3.0244
126 Y A -3.0832
127 K A -3.7037
128 E A -3.6374
129 D A -3.2473
130 P A -2.9019
131 E A -3.1425
132 E A -2.4142
133 F A 0.0000
134 R A 0.0000
135 L A 0.0000
136 R A -1.1664
137 F A 0.0000
138 I A 0.0000
139 Y A 0.0000
140 R A -0.6569
141 V A 0.0000
142 A A 0.0000
143 R A -0.7947
144 R A -1.0336
145 Y A -0.2939
146 P A 0.0000
147 F A 0.0000
148 I A 0.0000
149 D A -0.2954
150 P A 0.0000
151 T A 0.0000
152 L A 0.0000
153 L A 0.0000
154 L A 0.0000
155 Y A 0.0000
156 F A 0.0000
157 A A 0.0000
158 D A -1.0138
159 R A -1.1560
160 Y A 0.0000
161 V A -1.1747
162 G A -1.5576
163 I A 0.0000
164 Y A 0.0000
165 E A -3.4973
166 E A -3.3662
167 C A 0.0000
168 C A 0.0000
169 E A -4.0206
170 E A -4.4594
171 D A -3.9209
172 D A -3.6599
173 I A -3.0054
174 E A -2.3400
175 A A -1.3939
176 C A -1.6186
177 L A 0.0000
178 L A -0.6541
179 P A -1.6387
180 K A -2.0798
181 L A 0.0000
182 E A -3.8360
183 E A -4.0305
184 L A 0.0000
185 E A -4.3026
186 K A -4.2403
187 E A -3.0969
188 I A 0.0000
189 E A -2.4354
190 R A -3.0018
191 A A 0.0000
192 C A 0.0000
193 L A 0.0000
194 E A -1.5969
195 S A -0.8268
196 L A 0.0000
197 L A 0.0000
198 D A -0.4932
199 Y A -0.3181
200 Y A 0.0000
201 L A 0.0000
202 I A -0.8388
203 H A -1.0702
204 H A -0.7048
205 F A -0.5660
206 G A -1.1900
207 E A -1.9070
208 E A -2.4062
209 A A 0.0000
210 L A 0.0000
211 R A -2.1408
212 R A -1.2642
213 K A 0.0000
214 L A 0.0000
215 V A 0.0000
216 V A 0.0000
217 E A -0.6217
218 L A 0.0000
219 A A 0.0000
220 K A 0.0000
221 K A -1.6434
222 F A 0.0000
223 P A 0.0000
224 K A -2.8613
225 A A 0.0000
226 D A -3.0688
227 F A -2.2207
228 E A -2.7969
229 T A 0.0000
230 I A 0.0000
231 K A -2.6389
232 E A -2.3446
233 L A 0.0000
234 V A 0.0000
235 E A -3.0360
236 K A -2.4318
237 R A -1.8258
238 T A 0.0000
239 R A -2.3075
240 V A 0.0000
241 I A -0.4805
242 V A -0.5245
243 L A -0.4736
244 N A -0.5096
245 A A 0.0000
246 N A -0.7772
247 G A 0.0000
248 E A -0.5803
249 L A 0.0000
250 L A 0.0000
251 E A -0.3681
252 A A 0.0000
253 T A 0.0000
254 V A -0.0956
255 L A -0.6361
256 A A 0.0000
257 L A -0.6769
258 E A -1.8426
259 L A 0.0000
260 T A 0.0000
261 D A -1.6780
262 W A -0.8932
263 I A 0.0000
264 C A -1.5953
265 S A -0.8721
266 N A -1.3491
267 I A -1.6981
268 D A -2.8642
269 K A -3.1456
270 I A 0.0000
271 S A 0.0000
272 S A -1.9626
273 K A -2.5239
274 L A 0.0000
275 E A -3.3728
276 E A -3.4424
277 C A 0.0000
278 C A -2.7352
279 K A -3.4771
280 K A -3.2122
281 E A -2.8275
282 P A -1.9212
283 L A -0.9837
284 E A -1.7972
285 R A -2.0067
286 Y A 0.0000
287 Y A -0.4620
288 C A -1.0675
289 I A 0.0000
290 L A -0.4687
291 N A -1.4965
292 V A -1.7141
293 E A -2.7637
294 N A -2.4032
295 D A -2.2847
296 E A -2.6905
297 V A -1.4804
298 P A -1.8948
299 K A -2.9392
300 D A -2.7197
301 V A -1.6796
302 E A -2.7416
303 P A -1.9801
304 L A 0.0000
305 E A -2.5958
306 K A -3.2392
307 E A -2.4703
308 F A 0.0000
309 A A 0.0000
310 D A -2.5771
311 D A -2.0988
312 P A -1.5714
313 N A -2.2506
314 V A 0.0000
315 C A -2.5070
316 E A -4.0175
317 K A -3.9514
318 Y A 0.0000
319 K A -4.5360
320 K A -4.5688
321 D A -4.3002
322 K A -3.5388
323 Q A -2.3500
324 G A -1.8365
325 F A 0.0000
326 L A 0.0000
327 D A -1.0469
328 R A -1.1740
329 F A 0.0000
330 A A 0.0000
331 Y A 0.0000
332 E A 0.0000
333 Y A 0.0000
334 A A 0.0000
335 R A -1.0066
336 R A -1.0242
337 N A -0.6786
338 P A -1.3488
339 D A -1.8471
340 L A 0.0000
341 A A 0.0000
342 N A -0.5126
343 I A 0.0000
344 L A 0.0000
345 L A 0.0000
346 M A 0.0000
347 R A 0.0000
348 L A 0.0000
349 V A 0.0000
350 E A -1.0166
351 R A -1.6662
352 Y A 0.0000
353 E A -1.7940
354 K A -2.3765
355 A A -1.7976
356 L A 0.0000
357 E A -2.9626
358 E A -3.3570
359 C A 0.0000
360 C A -2.7225
361 K A -3.4829
362 K A -3.5263
363 P A -2.2271
364 D A -2.5847
365 P A -2.2407
366 L A -1.3300
367 S A -1.4093
368 C A -1.3378
369 L A 0.0000
370 K A -2.5683
371 G A -1.8310
372 V A 0.0000
373 F A 0.0000
374 K A -3.5325
375 E A -3.6877
376 L A 0.0000
377 D A -3.6148
378 A A -2.9898
379 L A -2.4748
380 V A 0.0000
381 E A -3.4728
382 R A -3.0503
383 Y A 0.0000
384 R A -2.4810
385 P A -1.7015
386 V A -1.3250
387 V A 0.0000
388 E A -2.0973
389 R A -2.5683
390 L A -1.4713
391 C A 0.0000
392 E A -2.8932
393 L A -1.8642
394 Y A -2.2060
395 R A -3.3367
396 R A -2.6693
397 L A -1.1878
398 G A -1.8250
399 P A -2.0175
400 E A -2.0701
401 G A -1.0823
402 F A 0.0000
403 T A 0.0000
404 V A 0.0000
405 Y A 0.2036
406 L A 0.0000
407 A A 0.0000
408 R A 0.0000
409 D A -0.7910
410 F A 0.0000
411 T A 0.0000
412 R A -1.2523
413 K A -1.3968
414 V A 0.0000
415 P A 0.0000
416 R A -0.6749
417 V A 0.0000
418 P A -0.6433
419 V A 0.0000
420 D A -1.6107
421 V A 0.0000
422 L A 0.0000
423 V A 0.0000
424 R A -1.1701
425 F A 0.0000
426 S A 0.0000
427 R A -1.1643
428 R A 0.0000
429 L A 0.0000
430 G A 0.0000
431 E A -1.3857
432 L A 0.0000
433 G A 0.0000
434 E A -1.9008
435 L A -0.2688
436 C A 0.0000
437 C A -1.3210
438 G A -1.0636
439 L A -0.9443
440 P A -1.8176
441 E A -3.3319
442 E A -3.4403
443 Q A -2.5832
444 R A -2.0008
445 L A 0.0000
446 P A -1.2063
447 C A -0.4300
448 F A 0.0000
449 L A 0.0000
450 D A -0.5346
451 Y A 0.0000
452 A A 0.0000
453 Y A 0.0000
454 L A 0.0000
455 V A 0.0000
456 L A 0.0000
457 T A 0.0000
458 E A 0.0000
459 L A 0.0000
460 C A 0.0000
461 V A -0.4882
462 L A 0.0000
463 C A 0.0000
464 L A -1.4300
465 R A -2.2553
466 D A -2.4201
467 P A -1.4013
468 V A -0.2849
469 D A 0.0000
470 P A -1.1534
471 R A -1.6150
472 V A 0.0000
473 E A -2.0938
474 E A -2.4784
475 V A -1.4120
476 C A 0.0000
477 T A -0.9702
478 S A -0.9475
479 S A -0.4705
480 P A -0.1714
481 W A 0.0000
482 D A -0.5387
483 M A 0.0000
484 L A 0.0000
485 E A -0.5063
486 G A -0.5141
487 F A 0.0000
488 L A 0.2936
489 A A -0.2365
490 L A 0.0000
491 E A -2.2717
492 P A -2.2016
493 S A -2.4520
494 D A -3.2270
495 D A -3.1260
496 Y A -2.4584
497 E A -2.7589
498 P A -1.6656
499 E A -1.1160
500 P A -0.9371
501 F A -0.9228
502 D A -1.9996
503 E A -2.7666
504 S A -1.7279
505 K A -1.8567
506 F A 0.0000
507 T A -1.0986
508 F A -0.4853
509 G A -1.3890
510 P A -2.3427
511 E A -2.4944
512 I A 0.0000
513 C A -1.7973
514 E A -2.3529
515 L A -1.6812
516 S A -1.5024
517 P A -1.8012
518 E A -2.7560
519 E A -2.2979
520 R A -2.1269
521 F A -1.9225
522 E A -1.7970
523 V A -0.9212
524 R A -1.1127
525 L A 0.0000
526 R A -1.3852
527 F A 0.0000
528 L A 0.0000
529 V A 0.0000
530 E A 0.0000
531 L A 0.0000
532 L A 0.0000
533 R A -0.8337
534 T A -0.6991
535 Y A -0.6625
536 P A -1.0847
537 N A -1.5659
538 V A 0.0000
539 S A -2.1234
540 D A -3.1952
541 E A -3.7723
542 K A -3.3471
543 L A 0.0000
544 D A -3.7818
545 K A -3.6651
546 I A 0.0000
547 L A 0.0000
548 E A -3.3684
549 L A -2.3006
550 F A 0.0000
551 D A -3.1846
552 K A -3.6410
553 F A 0.0000
554 I A 0.0000
555 E A -3.5234
556 E A -3.4271
557 C A 0.0000
558 C A -2.6403
559 S A -2.0034
560 S A -2.8085
561 K A -3.1498
562 D A -3.7792
563 K A -4.0470
564 E A -4.0857
565 K A -4.2859
566 C A -3.4830
567 F A 0.0000
568 K A -3.7266
569 E A -3.5738
570 L A -2.3486
571 N A 0.0000
572 P A -2.5768
573 K A -3.1186
574 F A 0.0000
575 I A 0.0000
576 K A -3.6389
577 K A -3.0718
578 V A 0.0000
579 K A -2.2129
580 E A -2.8164
581 L A -1.8160
582 C A -1.1698
583 S A -1.0689
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