Project name: jrk_3AP17

Status: done

Started: 2026-02-06 22:09:00
Chain sequence(s) A: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
C: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
B: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
D: AKFPKNFMFGYSWSGFQFEMGLPGSEVESDWWVWVHDKENIASGLVSGDLPENGPAYWHLYKQDHDIAEKLGMDCIRGGIEWARIFPKPTFDVKVDVEKDEEGNIISVDVPESTIKELEKIANMEALEHYRKIYSDWKERGKTFILNLYHWPLPLWIHDPIAVRKLGPDRAPAGWLDEKTVVEFVKFAAFVAYHLDDLVDMWSTMNEPNVVYNQGYINLRSGFPPGYLSFEAAEKAKFNLIQAHIGAYDAIKEYSEKSVGVIYAFAWHDPLAEEYKDEVEEIRKKDYEFVTILHSKGKLDWIGVNYYSRLVYGAKDGHLVPLPGYGFMSERGGFAKSGRPASDFGWEMYPEGLENLLKYLNNAYELPMIITENGMADAADRYRPHYLVSHLKAVYNAMKEGADVRGYLHWSLTDNYEWAQGFRMRFGLVYVDFETKKRYLRPSALVFREIATQKEIPEELAHLADLKFVTR
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:13)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:49:28)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/8dbdd53136f64d/tmp/folded.pdb                 (00:49:28)
[INFO]       Main:     Simulation completed successfully.                                          (01:31:31)
Show buried residues

Minimal score value
-4.8496
Maximal score value
1.6401
Average score
-0.7801
Total score value
-1466.6669

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A -1.5744
2 K A -2.3879
3 F A -1.7281
4 P A -1.8370
5 K A -2.4895
6 N A -2.2655
7 F A 0.0000
8 M A -0.6954
9 F A 0.0000
10 G A 0.0000
11 Y A 0.0000
12 S A 0.0000
13 W A 0.0000
14 S A 0.0000
15 G A -0.1205
16 F A 0.0000
17 Q A 0.0000
18 F A 0.0000
19 E A 0.0000
20 M A 0.0000
21 G A 0.0000
22 L A -0.6390
23 P A -0.8936
24 G A -0.9814
25 S A 0.0000
26 E A -1.7868
27 V A -1.4024
28 E A -1.7195
29 S A 0.0000
30 D A 0.0000
31 W A 0.0000
32 W A 0.0000
33 V A -0.3950
34 W A 0.0000
35 V A 0.0000
36 H A -1.5960
37 D A -1.2314
38 K A -1.7890
39 E A 0.0000
40 N A 0.0000
41 I A -0.5988
42 A A -0.2385
43 S A -0.1826
44 G A -0.2381
45 L A 0.0000
46 V A 0.0000
47 S A -0.7496
48 G A -1.0889
49 D A -1.6931
50 L A -1.4294
51 P A 0.0000
52 E A -2.3828
53 N A -1.8688
54 G A 0.0000
55 P A 0.0000
56 A A 0.0000
57 Y A 0.0000
58 W A 0.0000
59 H A -0.7925
60 L A -0.7570
61 Y A 0.0000
62 K A -2.3595
63 Q A -1.6795
64 D A 0.0000
65 H A 0.0000
66 D A -2.2208
67 I A -1.4475
68 A A 0.0000
69 E A -2.6333
70 K A -2.5553
71 L A 0.0000
72 G A -1.6805
73 M A 0.0000
74 D A -0.9056
75 C A 0.0000
76 I A 0.0000
77 R A 0.0000
78 G A 0.0000
79 G A 0.0000
80 I A 0.0000
81 E A 0.0000
82 W A 0.0000
83 A A 0.0000
84 R A 0.0000
85 I A 0.0000
86 F A 0.0000
87 P A -1.0070
88 K A -1.7667
89 P A -0.7672
90 T A 0.0000
91 F A -0.8834
92 D A -2.1601
93 V A 0.0000
94 K A -2.4872
95 V A 0.0000
96 D A -2.9734
97 V A -2.1658
98 E A -3.3898
99 K A -4.0602
100 D A -4.3878
101 E A -4.2239
102 E A -3.7917
103 G A -2.9161
104 N A -2.3369
105 I A 0.0000
106 I A -0.4130
107 S A -1.2396
108 V A -1.8764
109 D A -2.7764
110 V A 0.0000
111 P A -1.7982
112 E A -2.3699
113 S A -2.0981
114 T A 0.0000
115 I A 0.0000
116 K A -3.5949
117 E A -3.8331
118 L A 0.0000
119 E A -2.9283
120 K A -3.0464
121 I A -1.9666
122 A A 0.0000
123 N A -1.6227
124 M A -1.6307
125 E A -2.4479
126 A A 0.0000
127 L A 0.0000
128 E A -3.0514
129 H A -2.2388
130 Y A 0.0000
131 R A -2.3859
132 K A -2.6440
133 I A 0.0000
134 Y A 0.0000
135 S A -2.2168
136 D A -2.2255
137 W A 0.0000
138 K A -2.8149
139 E A -2.8651
140 R A -2.4562
141 G A -1.8081
142 K A -1.7209
143 T A -1.0998
144 F A 0.0000
145 I A 0.0000
146 L A 0.0000
147 N A 0.0000
148 L A 0.0000
149 Y A 0.0000
150 H A -0.0829
151 W A 0.0726
152 P A 0.0000
153 L A 0.0000
154 P A 0.0000
155 L A 0.5308
156 W A 0.2169
157 I A 0.0000
158 H A 0.0000
159 D A -0.3112
160 P A 0.0000
161 I A 0.0772
162 A A -0.5593
163 V A 0.0000
164 R A 0.0000
165 K A -0.2170
166 L A -0.7534
167 G A 0.0000
168 P A -1.6749
169 D A -2.7192
170 R A -2.6630
171 A A -1.6809
172 P A -0.9632
173 A A 0.0000
174 G A 0.0000
175 W A 0.0000
176 L A 0.0000
177 D A -2.4724
178 E A -2.8622
179 K A -2.4117
180 T A 0.0000
181 V A 0.0000
182 V A -0.7845
183 E A 0.0000
184 F A 0.0000
185 V A 0.0000
186 K A 0.0000
187 F A 0.0000
188 A A 0.0000
189 A A 0.0000
190 F A 0.0000
191 V A 0.0000
192 A A 0.0000
193 Y A 0.0914
194 H A -0.4540
195 L A 0.0000
196 D A -1.7916
197 D A -2.1894
198 L A 0.0000
199 V A 0.0000
200 D A -1.8474
201 M A -0.9918
202 W A 0.0000
203 S A 0.0000
204 T A 0.0000
205 M A 0.0000
206 N A 0.0000
207 E A -0.1447
208 P A 0.0000
209 N A -0.4553
210 V A -0.1376
211 V A 0.0000
212 Y A -0.5563
213 N A -0.8253
214 Q A -0.8070
215 G A 0.0000
216 Y A 0.0000
217 I A -0.3154
218 N A -1.1459
219 L A 0.0000
220 R A -1.6175
221 S A -0.9047
222 G A 0.0000
223 F A 0.0000
224 P A 0.0000
225 P A 0.0000
226 G A 0.0000
227 Y A 0.1891
228 L A 0.0000
229 S A 0.0000
230 F A -0.8959
231 E A -2.3271
232 A A 0.0000
233 A A -1.4199
234 E A -2.4697
235 K A -1.8026
236 A A 0.0000
237 K A -0.9057
238 F A 0.5423
239 N A 0.0000
240 L A 0.0000
241 I A 0.0000
242 Q A 0.0000
243 A A 0.0000
244 H A 0.0000
245 I A 0.0000
246 G A 0.0000
247 A A 0.0000
248 Y A -0.3953
249 D A -1.0757
250 A A 0.0000
251 I A 0.0000
252 K A -2.1127
253 E A -2.6896
254 Y A -1.4450
255 S A -1.9803
256 E A -2.6617
257 K A -1.8055
258 S A -1.0940
259 V A 0.0000
260 G A 0.0000
261 V A 0.0000
262 I A 0.0000
263 Y A 0.0000
264 A A -0.0309
265 F A 0.0000
266 A A 0.0659
267 W A 0.0000
268 H A 0.0000
269 D A -0.4130
270 P A -1.4215
271 L A 0.1377
272 A A -1.3140
273 E A -3.4822
274 E A -3.8059
275 Y A 0.0000
276 K A -4.3488
277 D A -4.5304
278 E A -4.4401
279 V A 0.0000
280 E A -3.6386
281 E A -4.3597
282 I A -3.0009
283 R A 0.0000
284 K A -4.2305
285 K A -4.0266
286 D A -3.1847
287 Y A 0.0000
288 E A -2.6837
289 F A 0.0000
290 V A 0.0000
291 T A -1.0366
292 I A -0.1971
293 L A 0.0000
294 H A -1.0376
295 S A -0.8702
296 K A -1.3731
297 G A -1.2812
298 K A -1.0770
299 L A 0.0000
300 D A -0.7465
301 W A 0.0000
302 I A 0.0000
303 G A 0.0000
304 V A 0.0000
305 N A 0.0000
306 Y A 0.0000
307 Y A 0.3715
308 S A 0.0000
309 R A 0.0000
310 L A 0.7724
311 V A 0.0000
312 Y A 0.0000
313 G A 0.0000
314 A A -1.3609
315 K A -2.8238
316 D A -2.9920
317 G A -1.8472
318 H A -1.2770
319 L A -0.3009
320 V A 1.6401
321 P A 1.1558
322 L A 0.9992
323 P A -0.2473
324 G A -0.4884
325 Y A 0.0562
326 G A 0.0000
327 F A 1.0846
328 M A 0.2656
329 S A -0.7427
330 E A -2.2566
331 R A -2.6934
332 G A -1.6521
333 G A -0.8258
334 F A 0.2086
335 A A 0.0000
336 K A -1.4948
337 S A -0.7634
338 G A -0.5950
339 R A -0.3059
340 P A 0.0000
341 A A 0.0000
342 S A 0.0000
343 D A -1.6568
344 F A -0.9074
345 G A 0.0000
346 W A 0.1319
347 E A 0.0000
348 M A 0.0000
349 Y A 0.0722
350 P A 0.0000
351 E A -0.8412
352 G A 0.0000
353 L A 0.0000
354 E A -1.2706
355 N A -0.9913
356 L A 0.0000
357 L A 0.0000
358 K A -2.4206
359 Y A -1.3107
360 L A 0.0000
361 N A -2.4328
362 N A -2.1657
363 A A -1.4486
364 Y A 0.0000
365 E A -2.6036
366 L A -1.3235
367 P A -1.1547
368 M A 0.0000
369 I A 0.0000
370 I A 0.0000
371 T A 0.0000
372 E A -0.1463
373 N A 0.0000
374 G A 0.0000
375 M A 0.0000
376 A A 0.0000
377 D A 0.0000
378 A A -0.3096
379 A A 0.0000
380 D A 0.0000
381 R A -0.4046
382 Y A -0.1561
383 R A 0.0000
384 P A 0.0000
385 H A 0.0000
386 Y A 0.0000
387 L A 0.0000
388 V A 0.0000
389 S A 0.0000
390 H A 0.0000
391 L A 0.0000
392 K A -0.7913
393 A A 0.0000
394 V A 0.0000
395 Y A -1.1068
396 N A -1.7354
397 A A 0.0000
398 M A -2.1001
399 K A -2.8247
400 E A -3.2451
401 G A -2.5024
402 A A 0.0000
403 D A -2.7898
404 V A 0.0000
405 R A -1.4993
406 G A 0.0000
407 Y A 0.0000
408 L A 0.0000
409 H A 0.0000
410 W A 0.0000
411 S A 0.0000
412 L A 0.0000
413 T A 0.0000
414 D A 0.0000
415 N A 0.0000
416 Y A 0.0000
417 E A -0.5710
418 W A -0.0950
419 A A 0.0000
420 Q A -1.0311
421 G A 0.0000
422 F A -0.9820
423 R A -1.9685
424 M A 0.0000
425 R A -0.4329
426 F A 0.1097
427 G A 0.0000
428 L A 0.0000
429 V A 0.0000
430 Y A -0.2952
431 V A 0.0000
432 D A -1.5233
433 F A 0.0000
434 E A -2.3820
435 T A -1.7477
436 K A -1.6893
437 K A -2.3397
438 R A -1.2310
439 Y A -0.9453
440 L A -0.3051
441 R A 0.0000
442 P A 0.0000
443 S A 0.0000
444 A A 0.0000
445 L A 0.0000
446 V A 0.0000
447 F A 0.0000
448 R A -1.1669
449 E A -1.1437
450 I A 0.0000
451 A A 0.0000
452 T A -1.7531
453 Q A -2.0879
454 K A -2.0324
455 E A -2.4290
456 I A 0.0000
457 P A -2.1205
458 E A -2.5924
459 E A -2.4222
460 L A 0.0000
461 A A -1.2223
462 H A -0.8789
463 L A 0.0000
464 A A -0.5406
465 D A -0.8733
466 L A -0.7720
467 K A -1.5993
468 F A -0.5161
469 V A 0.0000
470 T A -0.4458
1 A B -1.7752
2 K B -2.7403
3 F B 0.0000
4 P B -1.9827
5 K B -2.7620
6 N B -2.3168
7 F B 0.0000
8 M B 0.0000
9 F B 0.0000
10 G B 0.0000
11 Y B 0.0000
12 S B 0.0000
13 W B 0.0000
14 S B 0.0000
15 G B -0.0490
16 F B 0.0000
17 Q B 0.0000
18 F B 0.0000
19 E B 0.0000
20 M B 0.0000
21 G B -1.3118
22 L B -0.6186
23 P B -0.9071
24 G B -1.0412
25 S B 0.0000
26 E B -2.3910
27 V B -1.5280
28 E B -1.8331
29 S B 0.0000
30 D B 0.0000
31 W B 0.0000
32 W B 0.0000
33 V B -0.2555
34 W B 0.0000
35 V B 0.0000
36 H B -1.6768
37 D B -1.4281
38 K B -1.9742
39 E B -0.8789
40 N B 0.0000
41 I B -0.6701
42 A B -0.3422
43 S B 0.0000
44 G B -0.7539
45 L B 0.0000
46 V B 0.0000
47 S B -0.9986
48 G B -1.5882
49 D B -2.2948
50 L B -1.5813
51 P B 0.0000
52 E B -2.5829
53 N B -2.2682
54 G B 0.0000
55 P B 0.0000
56 A B 0.0000
57 Y B 0.0000
58 W B 0.0000
59 H B -1.2737
60 L B -1.1372
61 Y B -1.3649
62 K B -2.3319
63 Q B -2.0695
64 D B 0.0000
65 H B 0.0000
66 D B -1.8762
67 I B -1.2280
68 A B 0.0000
69 E B -1.8553
70 K B -2.1077
71 L B 0.0000
72 G B -1.2751
73 M B 0.0000
74 D B -0.7651
75 C B 0.0000
76 I B 0.0000
77 R B 0.0000
78 G B 0.0000
79 G B 0.0000
80 I B 0.0000
81 E B 0.0000
82 W B 0.0000
83 A B -0.5542
84 R B 0.0000
85 I B 0.0000
86 F B 0.0000
87 P B -1.1189
88 K B -1.3999
89 P B -0.7243
90 T B 0.0000
91 F B -0.4837
92 D B -1.8990
93 V B 0.0000
94 K B -2.4654
95 V B -2.3872
96 D B -3.1652
97 V B 0.0000
98 E B -2.8633
99 K B -2.7620
100 D B -3.2684
101 E B -4.0349
102 E B -3.8778
103 G B -3.1633
104 N B -2.3123
105 I B -0.7041
106 I B 0.7612
107 S B -0.6694
108 V B -1.4205
109 D B -2.9143
110 V B 0.0000
111 P B -2.0955
112 E B -2.3466
113 S B -2.1767
114 T B 0.0000
115 I B 0.0000
116 K B -3.5953
117 E B -3.6353
118 L B 0.0000
119 E B -3.1608
120 K B -3.1603
121 I B -1.9797
122 A B -2.0662
123 N B -1.9223
124 M B -1.8780
125 E B -2.5552
126 A B -1.8504
127 L B 0.0000
128 E B -2.9481
129 H B -2.3314
130 Y B 0.0000
131 R B -2.3055
132 K B -2.7256
133 I B 0.0000
134 Y B 0.0000
135 S B -2.0961
136 D B -2.1445
137 W B 0.0000
138 K B -2.1007
139 E B -2.5738
140 R B -2.1891
141 G B -1.7028
142 K B -1.4367
143 T B -0.6629
144 F B 0.0000
145 I B 0.0000
146 L B 0.0000
147 N B 0.0000
148 L B 0.0000
149 Y B 0.0000
150 H B -0.0908
151 W B 0.0950
152 P B 0.0000
153 L B 0.0000
154 P B 0.0000
155 L B 0.1734
156 W B 0.0502
157 I B 0.0000
158 H B 0.0000
159 D B -0.4945
160 P B 0.0000
161 I B 0.0572
162 A B -0.2055
163 V B 0.0000
164 R B 0.0000
165 K B -0.0561
166 L B -0.3294
167 G B 0.0000
168 P B -1.2674
169 D B -2.1048
170 R B -1.4750
171 A B -0.9663
172 P B -0.7677
173 A B 0.0000
174 G B 0.0000
175 W B 0.0000
176 L B 0.0000
177 D B -2.0095
178 E B -3.0733
179 K B -1.6566
180 T B 0.0000
181 V B 0.0000
182 V B 0.0000
183 E B 0.0000
184 F B 0.0000
185 V B 0.0000
186 K B 0.0000
187 F B 0.0000
188 A B 0.0000
189 A B 0.0000
190 F B 0.0000
191 V B 0.0000
192 A B 0.0000
193 Y B 0.3878
194 H B -0.3427
195 L B 0.0000
196 D B -1.6426
197 D B -2.2742
198 L B 0.0000
199 V B 0.0000
200 D B -1.4003
201 M B -0.7342
202 W B 0.0000
203 S B 0.0000
204 T B 0.0000
205 M B 0.0000
206 N B 0.0000
207 E B -0.2201
208 P B 0.0000
209 N B -0.7029
210 V B -0.3131
211 V B 0.0000
212 Y B -0.7089
213 N B -0.7025
214 Q B -0.7025
215 G B 0.0000
216 Y B 0.0000
217 I B -0.1692
218 N B -0.3206
219 L B 0.0000
220 R B -1.0902
221 S B -0.6893
222 G B -0.4511
223 F B 0.0000
224 P B 0.0000
225 P B 0.0000
226 G B 0.0000
227 Y B 0.1173
228 L B 0.0000
229 S B 0.0000
230 F B -1.0540
231 E B -2.4449
232 A B 0.0000
233 A B 0.0000
234 E B -2.6160
235 K B -2.3539
236 A B 0.0000
237 K B -0.8946
238 F B 0.1508
239 N B 0.0000
240 L B 0.0000
241 I B 0.6585
242 Q B 0.3703
243 A B 0.0000
244 H B 0.0000
245 I B -0.0560
246 G B 0.0000
247 A B 0.0000
248 Y B 0.0000
249 D B -2.0784
250 A B 0.0000
251 I B 0.0000
252 K B -2.6548
253 E B -2.2444
254 Y B -1.1688
255 S B 0.0000
256 E B -2.8802
257 K B -2.2041
258 S B -1.2682
259 V B 0.0000
260 G B 0.0000
261 V B 0.0000
262 I B 0.0000
263 Y B 0.0000
264 A B -0.2358
265 F B 0.0000
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232 A D 0.0000
233 A D 0.0000
234 E D -2.8286
235 K D -2.6509
236 A D 0.0000
237 K D -1.3871
238 F D -0.5480
239 N D 0.0000
240 L D 0.0000
241 I D 0.3420
242 Q D 0.0000
243 A D 0.0000
244 H D 0.0000
245 I D 0.0000
246 G D 0.0000
247 A D 0.0000
248 Y D -0.3503
249 D D -0.6367
250 A D 0.0000
251 I D 0.0000
252 K D -1.7531
253 E D -1.7961
254 Y D -0.9633
255 S D 0.0000
256 E D -2.3928
257 K D -1.8930
258 S D -1.2218
259 V D 0.0000
260 G D 0.0000
261 V D 0.0000
262 I D 0.0000
263 Y D 0.0000
264 A D -0.0481
265 F D 0.0000
266 A D 0.0249
267 W D 0.0000
268 H D 0.0000
269 D D 0.0000
270 P D -0.7814
271 L D 0.6502
272 A D -1.0119
273 E D -3.1961
274 E D -3.2258
275 Y D -2.7913
276 K D -3.6351
277 D D -4.2542
278 E D -3.7962
279 V D 0.0000
280 E D -3.6445
281 E D -3.8935
282 I D -2.7744
283 R D 0.0000
284 K D -3.6668
285 K D -3.7298
286 D D -2.7412
287 Y D 0.0000
288 E D -2.2978
289 F D -0.7580
290 V D 0.0000
291 T D -0.9137
292 I D 0.1301
293 L D 0.0000
294 H D -0.8983
295 S D -0.6119
296 K D -0.9561
297 G D -1.0714
298 K D -0.8348
299 L D 0.0000
300 D D -0.9799
301 W D 0.0000
302 I D 0.0000
303 G D 0.0000
304 V D 0.0000
305 N D 0.0000
306 Y D 0.0000
307 Y D 0.2944
308 S D 0.0000
309 R D 0.2555
310 L D 0.7339
311 V D 0.0000
312 Y D 0.3608
313 G D 0.0000
314 A D -1.4424
315 K D -2.7753
316 D D -2.9848
317 G D -2.5103
318 H D -1.9051
319 L D -0.8490
320 V D -0.2631
321 P D 0.5362
322 L D 0.3599
323 P D -0.1709
324 G D -0.5401
325 Y D -0.1451
326 G D 0.0000
327 F D 0.7589
328 M D 0.0728
329 S D -1.0979
330 E D -2.6317
331 R D -2.6974
332 G D -1.8193
333 G D -1.2302
334 F D -0.8088
335 A D 0.0000
336 K D -1.8711
337 S D -0.9807
338 G D -0.9474
339 R D -0.7327
340 P D 0.0000
341 A D 0.0000
342 S D 0.0000
343 D D -1.6330
344 F D -0.7531
345 G D 0.0000
346 W D 0.0904
347 E D 0.0000
348 M D 0.0000
349 Y D -0.0856
350 P D 0.0000
351 E D -1.1288
352 G D 0.0000
353 L D 0.0000
354 E D -1.7960
355 N D -2.1153
356 L D 0.0000
357 L D 0.0000
358 K D -2.7127
359 Y D -1.6140
360 L D 0.0000
361 N D -2.3246
362 N D -2.1656
363 A D -1.4130
364 Y D 0.0000
365 E D -2.4727
366 L D 0.0000
367 P D -1.1083
368 M D 0.0000
369 I D 0.0000
370 I D 0.0000
371 T D 0.0000
372 E D -0.1300
373 N D 0.0000
374 G D 0.0000
375 M D 0.0000
376 A D 0.0000
377 D D 0.0000
378 A D -0.3613
379 A D -0.1615
380 D D -0.3377
381 R D -0.5266
382 Y D -0.1935
383 R D 0.0000
384 P D 0.0000
385 H D 0.0000
386 Y D 0.0000
387 L D 0.0000
388 V D 0.0000
389 S D 0.0000
390 H D 0.0000
391 L D 0.0000
392 K D -0.8069
393 A D 0.0000
394 V D 0.0000
395 Y D -1.1962
396 N D -1.8814
397 A D 0.0000
398 M D -2.0282
399 K D -2.6911
400 E D -3.3470
401 G D -2.4355
402 A D 0.0000
403 D D -1.7757
404 V D 0.0000
405 R D -1.4703
406 G D 0.0000
407 Y D 0.0000
408 L D 0.0000
409 H D 0.0000
410 W D 0.0496
411 S D 0.0000
412 L D 0.0000
413 T D 0.0000
414 D D 0.0000
415 N D 0.0000
416 Y D 0.0000
417 E D -0.5463
418 W D 0.0169
419 A D 0.0000
420 Q D -1.1051
421 G D 0.0000
422 F D -0.9169
423 R D -1.9381
424 M D 0.0000
425 R D -0.6275
426 F D 0.0000
427 G D 0.0000
428 L D 0.0000
429 V D 0.0000
430 Y D -0.2690
431 V D 0.0000
432 D D -1.4267
433 F D -1.3745
434 E D -2.2587
435 T D -1.6277
436 K D -1.5158
437 K D -2.2783
438 R D -1.4577
439 Y D -1.0840
440 L D 0.0000
441 R D 0.0000
442 P D 0.0000
443 S D 0.0000
444 A D 0.0000
445 L D 0.0000
446 V D 0.0000
447 F D 0.0000
448 R D -1.1336
449 E D -0.9294
450 I D 0.0000
451 A D 0.0000
452 T D -1.2895
453 Q D -2.0766
454 K D -2.0866
455 E D -2.1216
456 I D 0.0000
457 P D -1.9726
458 E D -2.6708
459 E D -2.2919
460 L D 0.0000
461 A D -1.0765
462 H D 0.0000
463 L D 0.0000
464 A D -0.9780
465 D D -1.0970
466 L D 0.0000
467 K D -1.8109
468 F D -0.6211
469 V D 0.0000
470 T D -0.6551
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.6261 3.0021 View CSV PDB
4.5 -0.7022 2.9708 View CSV PDB
5.0 -0.7978 2.9209 View CSV PDB
5.5 -0.8946 2.8598 View CSV PDB
6.0 -0.9726 2.7975 View CSV PDB
6.5 -1.0159 2.7437 View CSV PDB
7.0 -1.022 2.7073 View CSV PDB
7.5 -1.0015 2.6891 View CSV PDB
8.0 -0.9662 2.6821 View CSV PDB
8.5 -0.9215 2.6796 View CSV PDB
9.0 -0.8682 2.6787 View CSV PDB