Project name: NP_stalk55

Status: done

Started: 2026-06-10 11:32:32
Chain sequence(s) A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDEFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDEFGAIAGFIEGGWTGMVDGWYGYHHQNEQGSGYAADLKSTQNAIDKITNKVNSVIELTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is partially or entirely disordered. Average score is   
                       recommended for pH analysis.                                                (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:04)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:22:03)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/8ed10945afd6b1/tmp/folded.pdb                 (00:22:03)
[INFO]       Main:     Simulation completed successfully.                                          (00:31:23)
Show buried residues

Minimal score value
-4.3869
Maximal score value
1.9212
Average score
-0.9229
Total score value
-1124.0719

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 S A -0.4336
2 S A -0.4723
3 V A -0.2404
4 L A -0.5659
5 K A -1.7202
6 T A 0.0000
7 F A -1.0674
8 E A -1.9701
9 R A -2.5004
10 F A 0.0000
11 T A -1.3564
12 I A -1.1882
13 Q A -1.7755
14 Q A -1.4943
15 E A -1.0212
16 L A -0.7710
17 Q A -2.1059
18 E A -1.9684
19 Q A -2.2786
20 S A -2.4366
21 E A -2.9734
22 D A -2.5476
23 T A -1.4985
24 P A 0.1309
25 I A 1.1846
26 P A 0.5488
27 L A -0.2629
28 E A -1.7081
29 T A 0.0000
30 I A 0.0000
31 R A -2.4674
32 P A 0.0000
33 T A -1.0358
34 I A 0.0000
35 R A -1.1100
36 V A 0.0000
37 F A 0.0000
38 V A 0.0000
39 I A 0.0000
40 N A -2.3912
41 N A -2.7460
42 N A -2.4284
43 D A -2.1651
44 P A -1.4668
45 V A 0.0167
46 V A -0.3660
47 R A 0.0000
48 S A 0.0000
49 R A -0.0982
50 L A 0.0000
51 L A 0.0000
52 F A 0.0000
53 F A 0.0000
54 N A 0.0000
55 L A 0.0000
56 R A -0.9137
57 I A 0.0000
58 I A 0.0000
59 M A 0.0000
60 S A 0.0000
61 N A -2.0146
62 T A -1.3385
63 A A 0.0000
64 R A -1.9412
65 E A -1.9462
66 G A -1.4053
67 H A -1.1186
68 R A -1.1636
69 A A 0.0000
70 G A 0.0000
71 A A 0.0000
72 L A 0.0000
73 L A 0.0000
74 S A 0.0000
75 L A 0.0000
76 L A 0.0000
77 S A 0.0000
78 L A 0.0000
79 P A -0.0685
80 S A -0.3720
81 A A -0.8411
82 A A -1.0471
83 M A 0.0000
84 S A -1.4762
85 N A -1.7213
86 H A -1.0801
87 I A 0.0000
88 K A -1.8159
89 L A -0.7293
90 A A 0.0000
91 M A -0.6272
92 H A -0.8174
93 S A 0.0000
94 P A -1.0449
95 E A -1.2326
96 A A 0.0000
97 S A -1.1300
98 I A 0.0000
99 D A -1.5333
100 R A -1.8734
101 V A 0.0000
102 E A -1.2198
103 I A 0.0000
104 T A -0.5574
105 G A 0.0000
106 F A -0.7511
107 E A -1.9027
108 N A -2.4121
109 N A -2.4807
110 S A -1.8093
111 F A 0.0000
112 R A -1.2145
113 V A 0.0000
114 I A 0.1177
115 P A -0.4194
116 D A -0.8870
117 A A -0.9320
118 R A -1.9847
119 T A -1.2545
120 S A -0.8135
121 T A -0.8680
122 M A -0.7249
123 S A -1.3389
124 R A -2.1286
125 G A -1.5612
126 E A -1.3294
127 V A 0.0000
128 L A -0.4812
129 A A -0.6051
130 F A 0.0000
131 E A -0.8134
132 A A -0.7517
133 L A -1.0251
134 A A 0.0000
135 E A -2.3952
136 D A -2.0985
137 I A 0.0000
138 P A -1.8180
139 D A -2.1793
140 E A -1.7887
141 F A 1.0055
142 G A 0.0954
143 A A 0.4682
144 I A 1.4524
145 A A 0.4888
146 G A -0.4841
147 F A 0.3168
148 I A 0.8879
149 E A -1.1990
150 G A -0.8281
151 G A -0.1774
152 W A 0.2541
153 T A -0.4048
154 G A -0.3321
155 M A 0.0689
156 V A 0.0707
157 D A -0.9509
158 G A -0.3778
159 W A 0.5226
160 Y A 0.8424
161 G A 0.1221
162 Y A 0.2608
163 H A -1.1251
164 H A -2.3900
165 Q A -3.0955
166 N A -3.6950
167 E A -3.5765
168 Q A -2.9828
169 G A -1.9304
170 S A -1.1684
171 G A -0.8606
172 Y A 0.5271
173 A A 0.3964
174 A A -0.2386
175 D A -0.9419
176 L A -0.2016
177 K A -1.9990
178 S A -1.3459
179 T A -0.8683
180 Q A -1.6487
181 N A -1.7275
182 A A 0.0000
183 I A -0.4846
184 D A -2.4531
185 K A -2.7642
186 I A -1.3393
187 T A -1.7737
188 N A -2.5568
189 K A -2.1343
190 V A -0.6379
191 N A -1.7194
192 S A -1.1357
193 V A 0.0000
194 I A 0.7371
195 E A -1.4102
196 L A -0.5310
197 T A -0.8873
198 L A 0.0000
199 N A -2.6255
200 H A -2.6175
201 Q A -2.6536
202 T A 0.0000
203 P A 0.0000
204 F A 0.0000
205 V A -0.2676
206 N A -1.4031
207 L A -0.6522
208 Q A -1.8669
209 N A -2.7094
210 D A -2.7691
211 V A 0.0000
212 E A -1.5613
213 D A -2.3474
214 D A -0.9137
215 I A 0.6573
216 F A 0.0000
217 D A -2.1586
218 E A -2.7664
219 T A -2.4703
220 E A -2.9382
221 K A -2.2487
222 F A 0.0000
223 L A -1.0409
224 D A -1.1792
225 V A 0.0000
226 C A 0.0000
227 Y A 0.0000
228 S A 0.0000
229 V A 0.0000
230 L A 0.0000
231 M A 0.0000
232 Q A 0.0000
233 A A 0.0000
234 W A 0.0000
235 I A 0.0000
236 V A 0.0000
237 T A 0.0000
238 C A 0.0820
239 K A 0.0000
240 C A -0.1924
241 M A -0.1372
242 T A -0.5750
243 A A -1.1238
244 P A -1.7819
245 D A -2.4951
246 Q A -1.9975
247 P A -0.8590
248 P A -0.3568
249 V A 0.6883
250 S A -0.5469
251 V A 0.0000
252 A A -0.4711
253 K A -1.6149
254 R A -1.3046
255 M A 0.0000
256 A A -1.6656
257 K A -2.2374
258 Y A 0.0000
259 Q A -1.9547
260 Q A -2.4555
261 Q A -2.4045
262 G A -1.8308
263 R A -1.5718
264 I A 0.0000
265 N A -0.7529
266 A A -0.1194
267 C A 0.6163
268 R A -0.3405
269 Y A 0.0000
270 V A 0.2522
271 L A 0.0000
272 Q A 0.0000
273 P A -0.7277
274 E A 0.0000
275 A A 0.0000
276 Q A -0.5701
277 R A -0.7908
278 L A -0.3957
279 I A 0.0000
280 Q A -0.7506
281 N A -1.0442
282 A A 0.0000
283 I A 0.0000
284 R A -1.2406
285 K A -1.7508
286 S A 0.0000
287 M A 0.0000
288 V A 0.0000
289 V A 0.0000
290 R A 0.0000
291 H A 0.0000
292 F A 0.0000
293 M A 0.0000
294 T A 0.0000
295 Y A 0.1923
296 E A 0.0000
297 L A 0.0000
298 Q A -0.3623
299 L A -0.0080
300 S A -0.5319
301 Q A -0.7545
302 S A -0.7879
303 R A -1.4465
304 S A -0.0785
305 L A 1.5610
306 L A 1.5719
307 A A 0.0478
308 N A -1.2578
309 R A -1.5770
310 Y A 0.0000
311 Y A -0.4885
312 A A -0.4037
313 M A 0.0000
314 V A 0.0000
315 G A -0.5244
316 D A -0.5605
317 I A 0.0000
318 G A 0.0000
319 K A -0.9540
320 Y A -0.6497
321 I A 0.0000
322 E A -0.6497
323 H A -0.6654
324 S A -0.5666
325 G A -0.4954
326 M A 0.0000
327 G A -0.2109
328 G A -0.0900
329 F A 0.0000
330 F A 0.0737
331 L A -0.1227
332 T A 0.0000
333 L A -0.4197
334 K A -1.5690
335 Y A 0.0000
336 G A 0.0000
337 L A -0.6747
338 G A -1.1911
339 T A -1.4061
340 R A -2.3293
341 W A -1.0541
342 P A -1.2477
343 T A 0.0000
344 L A 0.0000
345 A A 0.0000
346 L A 0.0000
347 A A 0.0000
348 A A 0.0000
349 F A 0.0000
350 S A -0.4702
351 G A -0.6378
352 E A 0.0000
353 L A -0.3045
354 Q A -0.7454
355 K A -0.7729
356 L A 0.0000
357 K A -0.8698
358 A A 0.0000
359 L A 0.0000
360 M A 0.0412
361 L A 0.2347
362 H A 0.0000
363 Y A -0.2058
364 Q A -0.8238
365 S A -0.5080
366 L A -0.4430
367 G A -0.5155
368 P A -0.5601
369 M A -0.2823
370 A A 0.0000
371 K A -0.6550
372 Y A 0.0000
373 M A 0.0000
374 A A -0.3272
375 L A 0.0000
376 L A 0.0000
377 E A -0.5740
378 S A 0.0000
379 P A -0.1223
380 K A 0.0000
381 L A 0.1217
382 M A 0.2206
383 D A -0.1814
384 F A 0.0000
385 V A 0.2504
386 P A 0.0000
387 S A -0.7052
388 E A -0.2048
389 Y A 0.0000
390 P A 0.0000
391 L A 0.0000
392 V A 0.0000
393 Y A 0.0000
394 S A 0.0000
395 Y A 0.0000
396 A A 0.0000
397 M A 0.0000
398 G A 0.0000
399 I A 0.0000
400 G A 0.0000
401 T A 0.0000
402 V A 0.5501
403 L A 0.8325
404 D A 0.1566
405 T A -0.4264
406 N A -1.4000
407 M A 0.0000
408 R A -2.4526
409 N A -2.7589
410 Y A -1.2835
411 A A -0.8380
412 Y A -0.6441
413 G A -0.9859
414 R A -1.5527
415 S A -1.4745
416 Y A 0.0000
417 L A -0.3470
418 N A -0.4551
419 P A -0.2119
420 Q A -0.7529
421 Y A 0.0000
422 F A -0.1371
423 Q A -0.5170
424 L A 0.0000
425 G A 0.0000
426 V A 0.0671
427 E A -0.7656
428 T A 0.0000
429 A A 0.0000
430 R A -1.6312
431 K A -1.6173
432 Q A -1.4545
433 Q A -1.2131
434 G A -0.9004
435 A A -0.9952
436 V A -1.6414
437 D A -3.4546
438 N A -3.7605
439 R A -4.0479
440 T A -2.8306
441 A A 0.0000
442 E A -3.6745
443 D A -2.9648
444 L A -0.7196
445 G A -1.3521
446 M A -1.1966
447 T A -0.7582
448 A A -0.5730
449 A A -0.8870
450 D A -1.5544
451 K A -1.4256
452 A A -1.0059
453 D A -1.8736
454 L A -0.6561
455 T A -0.6601
456 A A -0.8246
457 T A -0.3544
458 I A 0.0485
459 S A -0.4834
460 K A -0.7239
461 L A 0.7284
462 S A 0.3882
463 L A 1.2973
464 S A 0.3756
465 Q A -0.3070
466 L A 0.5969
467 P A -1.2953
468 R A -2.5963
469 G A -2.5196
470 R A -2.7147
471 Q A -2.0874
472 P A -0.7401
473 I A 0.6951
474 S A -0.0998
475 D A -0.4692
476 P A 0.0641
477 F A 0.7999
478 A A -0.2967
479 G A -1.1929
480 A A -1.2169
481 N A -2.8988
482 D A -3.9670
483 R A -4.1181
484 E A -3.7064
485 T A -2.1109
486 G A -1.6621
487 G A -1.4601
488 Q A -1.5084
489 A A -1.1223
490 T A -1.3069
491 D A -1.7109
492 T A -0.4564
493 P A -0.1923
494 V A 1.6741
495 Y A 0.8332
496 N A -0.4236
497 F A 1.2926
498 N A -0.5448
499 S A -0.2696
500 L A 0.3344
501 N A -1.9325
502 N A -2.7476
503 R A -3.3938
504 R A -3.2130
505 Y A -1.0617
506 D A -2.4137
507 N A -1.9541
508 Y A -0.5501
509 D A -2.1524
510 S A -1.9042
511 D A -2.8920
512 S A -2.8541
513 E A -3.6312
514 D A -3.7132
515 R A -3.2790
516 I A -1.9875
517 D A -2.9781
518 N A -3.1265
519 D A -3.6235
520 Q A -4.0358
521 D A -3.4267
522 Q A -2.4294
523 A A -1.1669
524 I A -0.3313
525 R A -2.5553
526 E A -3.2143
527 N A -3.6682
528 R A -3.7702
529 G A -2.7163
530 E A -2.4914
531 P A -1.6568
532 G A -1.6431
533 Q A -2.4774
534 P A -2.2155
535 N A -2.7690
536 N A -2.6905
537 Q A -2.1769
538 T A -1.6094
539 S A -1.6761
540 E A -2.9338
541 N A -3.3175
542 Q A -3.0903
543 Q A -2.9331
544 R A -2.4413
545 L A -0.1494
546 N A -0.6749
547 L A 0.8620
548 P A 0.6869
549 V A 1.6573
550 P A 0.5333
551 Q A -0.3391
552 C A 0.0985
553 T A -0.1107
554 S A -0.3339
555 G A -0.4501
556 M A -0.6966
557 S A -1.3324
558 S A -1.7437
559 E A -3.0662
560 E A -2.8440
561 F A -1.8483
562 Q A -2.8267
563 H A -2.9561
564 S A -1.8039
565 M A -1.3555
566 N A -2.4581
567 Q A -2.2948
568 Y A -0.6889
569 I A -0.7745
570 R A -2.6500
571 A A -1.8427
572 M A -1.3408
573 H A -2.4362
574 E A -3.2229
575 Q A -2.4364
576 Y A -1.6091
577 R A -3.2365
578 G A -3.2208
579 S A -2.9171
580 Q A -3.6132
581 D A -4.3869
582 D A -4.3728
583 D A -4.1769
584 A A -3.0850
585 N A -3.3680
586 D A -2.9512
587 A A -1.8933
588 T A -1.7604
589 D A -2.5309
590 G A -2.0884
591 N A -2.1528
592 D A -1.3379
593 I A 0.8503
594 S A 0.6101
595 L A 1.5784
596 E A 0.2804
597 L A 1.7334
598 V A 1.7192
599 G A 0.0952
600 D A -1.0125
601 F A 0.1789
602 D A -1.6149
603 S A -1.4395
604 H A -2.1878
605 H A -2.2600
606 H A -2.4207
607 H A -2.4193
608 H A -2.2028
609 H A -1.6888
1 S B -0.0269
2 S B 0.5015
3 V B 1.9136
4 L B 1.4566
5 K B -0.7748
6 T B 0.2066
7 F B 0.8642
8 E B -1.0286
9 R B -1.4677
10 F B 0.4763
11 T B 0.0000
12 I B -0.8799
13 Q B -1.7802
14 Q B -2.1411
15 E B -1.8485
16 L B -1.4879
17 Q B -2.8091
18 E B -3.6584
19 Q B -3.2956
20 S B -2.9769
21 E B -3.1884
22 D B -2.8321
23 T B -1.7978
24 P B 0.0949
25 I B 1.3828
26 P B 0.8993
27 L B 1.2402
28 E B -0.8198
29 T B -0.2799
30 I B 0.6047
31 R B -1.5283
32 P B -0.9356
33 T B -0.9956
34 I B 0.0000
35 R B -1.2486
36 V B 0.0000
37 F B 0.0000
38 V B 0.0000
39 I B 0.0000
40 N B -2.0081
41 N B -1.9652
42 N B -2.1817
43 D B -1.7349
44 P B -0.8940
45 V B 0.1945
46 V B -0.2734
47 R B 0.0000
48 S B 0.0000
49 R B -0.1116
50 L B 0.0000
51 L B 0.0000
52 F B 0.0000
53 F B 0.0000
54 N B 0.0000
55 L B 0.0000
56 R B -0.9632
57 I B 0.0000
58 I B 0.0000
59 M B 0.0000
60 S B 0.0000
61 N B -2.0293
62 T B -1.3810
63 A B 0.0000
64 R B -2.8450
65 E B -2.7542
66 G B -1.9449
67 H B -1.6093
68 R B -1.6514
69 A B 0.0000
70 G B 0.0000
71 A B 0.0000
72 L B 0.0000
73 L B 0.0000
74 S B 0.0000
75 L B 0.0000
76 L B 0.0000
77 S B 0.0000
78 L B 0.0000
79 P B 0.0000
80 S B 0.0000
81 A B -1.4722
82 A B -1.1515
83 M B 0.0000
84 S B -1.2258
85 N B -1.3266
86 H B 0.0000
87 I B 0.0000
88 K B -1.4254
89 L B -0.5782
90 A B 0.0000
91 M B -0.4700
92 H B -0.9717
93 S B 0.0000
94 P B -1.1785
95 E B -1.3024
96 A B 0.0000
97 S B -1.0339
98 I B 0.0000
99 D B -1.7461
100 R B -1.7566
101 V B 0.0000
102 E B -1.1722
103 I B 0.0000
104 T B -0.3490
105 G B 0.0000
106 F B -0.7303
107 E B -1.7483
108 N B -2.3326
109 N B -2.4212
110 S B -1.7916
111 F B 0.0000
112 R B -1.1167
113 V B 0.0000
114 I B 0.1044
115 P B -0.4222
116 D B -0.8755
117 A B -0.9426
118 R B -1.9667
119 T B -1.1845
120 S B -0.7638
121 T B -0.8804
122 M B -0.7408
123 S B -1.3282
124 R B -2.1007
125 G B -1.5458
126 E B -1.3525
127 V B 0.0000
128 L B -0.4306
129 A B -0.6326
130 F B 0.0000
131 E B -1.0655
132 A B -0.8216
133 L B -1.1450
134 A B 0.0000
135 E B -2.3665
136 D B -2.0106
137 I B 0.0000
138 P B 0.0000
139 D B -1.8131
140 E B -1.4889
141 F B 1.1408
142 G B 0.4259
143 A B 0.2760
144 I B 1.3504
145 A B 0.3512
146 G B -0.3510
147 F B 0.2796
148 I B 0.5133
149 E B -1.3251
150 G B -1.0406
151 G B -0.5516
152 W B 0.0676
153 T B -0.5525
154 G B -0.8598
155 M B -0.0297
156 V B -0.0643
157 D B -1.0887
158 G B -0.4444
159 W B 0.5745
160 Y B 0.7856
161 G B 0.0826
162 Y B 0.1722
163 H B -1.2004
164 H B -2.3792
165 Q B -3.2513
166 N B -3.6766
167 E B -3.5766
168 Q B -2.9671
169 G B -1.9409
170 S B -1.0860
171 G B -0.6502
172 Y B 0.6112
173 A B 0.2532
174 A B -0.4156
175 D B -1.5100
176 L B -0.5233
177 K B -2.0714
178 S B -1.4715
179 T B -1.0447
180 Q B -1.7577
181 N B -2.0715
182 A B 0.0000
183 I B -0.3773
184 D B -2.1748
185 K B -2.6373
186 I B -1.1040
187 T B -1.3793
188 N B -2.6107
189 K B -1.9030
190 V B -0.6856
191 N B -1.9310
192 S B -1.5643
193 V B 0.0000
194 I B 0.0580
195 E B -1.8459
196 L B -0.8350
197 T B 0.0000
198 L B 0.0000
199 N B -2.2583
200 H B -2.6660
201 Q B -2.9965
202 T B 0.0000
203 P B 0.0000
204 F B 0.0000
205 V B 0.5392
206 N B -1.0598
207 L B -0.7204
208 Q B -1.9264
209 N B -2.8861
210 D B -3.0033
211 V B 0.0000
212 E B 0.0000
213 D B -2.4561
214 D B -1.2087
215 I B 0.7519
216 F B 0.0000
217 D B -1.4547
218 E B -1.4350
219 T B -1.5825
220 E B -1.7312
221 K B -1.2746
222 F B 0.0000
223 L B 0.0000
224 D B -0.9022
225 V B 0.0000
226 C B 0.0000
227 Y B 0.0000
228 S B 0.0000
229 V B 0.0000
230 L B 0.0000
231 M B 0.0000
232 Q B 0.0000
233 A B 0.0000
234 W B 0.0000
235 I B 0.0000
236 V B 0.0000
237 T B 0.0000
238 C B 0.0000
239 K B 0.0000
240 C B -0.2930
241 M B -0.1996
242 T B -0.9307
243 A B -1.0828
244 P B -1.3882
245 D B -2.2049
246 Q B -1.3398
247 P B -0.5278
248 P B -0.2226
249 V B 0.9820
250 S B -0.3253
251 V B 0.0000
252 A B -0.4228
253 K B -1.6401
254 R B -1.2886
255 M B 0.0000
256 A B -1.4228
257 K B -1.7102
258 Y B 0.0000
259 Q B -1.6569
260 Q B -2.1558
261 Q B -2.2163
262 G B -1.6763
263 R B 0.0000
264 I B 0.0000
265 N B -0.9583
266 A B -0.3003
267 C B 0.0996
268 R B -1.2687
269 Y B 0.0000
270 V B 0.2414
271 L B 0.0000
272 Q B 0.0000
273 P B -0.5660
274 E B 0.0000
275 A B 0.0000
276 Q B -0.5816
277 R B -0.9075
278 L B -0.4674
279 I B 0.0000
280 Q B -0.9173
281 N B -1.3430
282 A B 0.0000
283 I B 0.0000
284 R B -1.4562
285 K B -2.3065
286 S B 0.0000
287 M B -0.7849
288 V B 0.0000
289 V B 0.0000
290 R B 0.0000
291 H B -0.1568
292 F B 0.0000
293 M B 0.0000
294 T B 0.0000
295 Y B 0.3207
296 E B 0.0000
297 L B 0.0000
298 Q B -0.0719
299 L B 0.0000
300 S B 0.0703
301 Q B 0.0000
302 S B -0.7121
303 R B -1.3023
304 S B -0.3791
305 L B 0.0000
306 L B -0.2082
307 A B -0.3661
308 N B -0.8691
309 R B -0.6432
310 Y B 0.0000
311 Y B 0.0000
312 A B 0.0000
313 M B 0.0000
314 V B 0.0000
315 G B 0.0000
316 D B 0.0000
317 I B 0.0000
318 G B 0.0000
319 K B -0.6959
320 Y B -0.6502
321 I B 0.0000
322 E B -0.5766
323 H B -0.5978
324 S B -0.9796
325 G B -1.0138
326 M B 0.0000
327 G B -0.9483
328 G B -0.0200
329 F B 0.0000
330 F B 0.0535
331 L B 0.0571
332 T B 0.0000
333 L B 0.0000
334 K B -0.5574
335 Y B 0.0000
336 G B 0.0000
337 L B 0.0000
338 G B 0.0000
339 T B 0.0000
340 R B -0.6072
341 W B 0.0000
342 P B -0.2803
343 T B 0.0352
344 L B 0.0000
345 A B 0.2349
346 L B 0.6174
347 A B 0.2759
348 A B 0.2100
349 F B 0.0000
350 S B -0.2339
351 G B -0.5429
352 E B -0.6602
353 L B -0.2495
354 Q B 0.0000
355 K B -0.9728
356 L B 0.0000
357 K B -0.1947
358 A B 0.0000
359 L B 0.0000
360 M B 0.0000
361 L B 0.0416
362 H B 0.0000
363 Y B 0.0000
364 Q B -0.3657
365 S B -0.5505
366 L B -0.2485
367 G B -0.1911
368 P B -0.4968
369 M B 0.0705
370 A B 0.0000
371 K B -0.5248
372 Y B 0.0000
373 M B 0.0000
374 A B -0.7569
375 L B 0.0000
376 L B -0.6624
377 E B -1.6760
378 S B -1.0617
379 P B -0.8017
380 K B -0.9963
381 L B -0.3117
382 M B 0.1979
383 D B -0.6177
384 F B 0.0000
385 V B 0.0757
386 P B 0.0000
387 S B -0.5220
388 E B -1.1690
389 Y B 0.0000
390 P B -0.3045
391 L B -0.1311
392 V B 0.0000
393 Y B 0.0000
394 S B 0.0000
395 Y B 0.0000
396 A B 0.0000
397 M B 0.0000
398 G B 0.0000
399 I B 0.0000
400 G B 0.0000
401 T B -0.5739
402 V B -0.5861
403 L B 0.0000
404 D B -0.5881
405 T B -1.0297
406 N B -2.0267
407 M B 0.0000
408 R B -2.5007
409 N B -2.7208
410 Y B 0.0000
411 A B -1.8628
412 Y B -0.8477
413 G B -0.9324
414 R B -1.2780
415 S B -0.6960
416 Y B -0.3675
417 L B 0.0000
418 N B -0.7292
419 P B -0.8322
420 Q B -1.3237
421 Y B -0.6291
422 F B -0.5753
423 Q B -1.2434
424 L B -0.8760
425 G B 0.0000
426 V B -1.4064
427 E B -2.5290
428 T B 0.0000
429 A B 0.0000
430 R B -3.2061
431 K B -3.1413
432 Q B -1.9033
433 Q B -1.5800
434 G B -1.0500
435 A B -0.9143
436 V B -0.7632
437 D B -2.0369
438 N B -3.1222
439 R B -3.6674
440 T B -2.6621
441 A B 0.0000
442 E B -3.8333
443 D B -3.5904
444 L B -2.1867
445 G B -2.4629
446 M B -1.4614
447 T B -0.8163
448 A B -0.5756
449 A B -0.8526
450 D B -1.4611
451 K B -1.4513
452 A B -1.2213
453 D B -2.1415
454 L B 0.0000
455 T B -1.0440
456 A B -1.1682
457 T B 0.0000
458 I B 0.0000
459 S B -0.9572
460 K B -1.1782
461 L B 0.0000
462 S B -0.1965
463 L B 1.1347
464 S B 0.3541
465 Q B 0.1609
466 L B 0.8829
467 P B -0.7368
468 R B -2.4009
469 G B -2.4770
470 R B -2.7101
471 Q B -2.0457
472 P B -0.7737
473 I B 0.6494
474 S B -0.2656
475 D B -0.8762
476 P B -0.2408
477 F B 0.3945
478 A B -0.6950
479 G B -1.2554
480 A B -1.2517
481 N B -2.8896
482 D B -3.9477
483 R B -4.1194
484 E B -3.6806
485 T B -2.0739
486 G B -1.6354
487 G B -1.4501
488 Q B -1.7302
489 A B -1.2375
490 T B -1.3700
491 D B -1.8443
492 T B -0.3976
493 P B 0.2027
494 V B 1.9212
495 Y B 1.8524
496 N B 0.3761
497 F B 1.4929
498 N B -0.4024
499 S B -0.3618
500 L B 0.2236
501 N B -2.0310
502 N B -2.9724
503 R B -3.4014
504 R B -3.2106
505 Y B -1.0278
506 D B -2.4362
507 N B -2.0781
508 Y B -0.7041
509 D B -2.3729
510 S B -1.6078
511 D B -2.3687
512 S B -2.1708
513 E B -3.0545
514 D B -3.7480
515 R B -3.4930
516 I B -2.9476
517 D B -3.5203
518 N B -3.2800
519 D B -3.4608
520 Q B -3.5133
521 D B -3.2347
522 Q B -2.1674
523 A B -1.1082
524 I B -0.1606
525 R B -2.4523
526 E B -3.3275
527 N B -3.6396
528 R B -3.8159
529 G B -2.9900
530 E B -2.8426
531 P B -1.7698
532 G B -1.6619
533 Q B -1.8653
534 P B -1.8530
535 N B -2.5097
536 N B -2.5678
537 Q B -2.1679
538 T B -1.3531
539 S B -1.6192
540 E B -2.9335
541 N B -3.3081
542 Q B -3.1341
543 Q B -2.9492
544 R B -2.3553
545 L B -0.0287
546 N B -0.3566
547 L B 1.3762
548 P B 0.8675
549 V B 1.6759
550 P B 0.5396
551 Q B -0.2968
552 C B 0.1008
553 T B -0.1533
554 S B -0.3704
555 G B -0.4900
556 M B -0.7720
557 S B -1.3401
558 S B -1.6988
559 E B -3.0535
560 E B -2.7260
561 F B -1.6868
562 Q B -2.5817
563 H B -2.6461
564 S B -1.5427
565 M B -0.7976
566 N B -1.7117
567 Q B -1.8425
568 Y B -0.3853
569 I B -0.6904
570 R B -2.5016
571 A B -1.7339
572 M B -1.2179
573 H B -2.3063
574 E B -3.2770
575 Q B -2.5784
576 Y B -1.4306
577 R B -3.3193
578 G B -3.3227
579 S B -2.8760
580 Q B -3.5923
581 D B -4.3776
582 D B -4.3050
583 D B -4.0984
584 A B -3.0454
585 N B -3.3278
586 D B -2.8750
587 A B -1.5830
588 T B -1.7262
589 D B -2.4998
590 G B -2.1439
591 N B -2.1677
592 D B -1.3306
593 I B 0.7344
594 S B 0.4214
595 L B 1.4733
596 E B 0.3727
597 L B 1.6926
598 V B 1.7230
599 G B -0.1178
600 D B -1.1413
601 F B 0.1204
602 D B -1.7359
603 S B -1.6150
604 H B -2.0048
605 H B -2.1833
606 H B -2.4485
607 H B -2.4047
608 H B -2.1738
609 H B -1.8051
Download PDB file
View in 3Dmol

Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is partially or entirely disordered. Average score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.4988 4.9902 View CSV PDB
4.5 -0.5798 4.8593 View CSV PDB
5.0 -0.6798 4.6862 View CSV PDB
5.5 -0.784 4.4971 View CSV PDB
6.0 -0.8788 4.3155 View CSV PDB
6.5 -0.9559 4.1912 View CSV PDB
7.0 -1.0144 4.1306 View CSV PDB
7.5 -1.0595 4.1101 View CSV PDB
8.0 -1.0954 4.1028 View CSV PDB
8.5 -1.1216 4.1004 View CSV PDB
9.0 -1.134 4.0996 View CSV PDB