Chain sequence(s) |
A: MAEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQSRGSGGGGGGGGYRGGSGGGYGGGGRREGGYGGGGGYGGGRREGGYGGGGGGGYGGGRREGGYGGGSEGNWRS
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.8462 | |
2 | A | A | -0.0346 | |
3 | E | A | -0.8523 | |
4 | V | A | 0.4648 | |
5 | E | A | -0.8168 | |
6 | Y | A | -1.5762 | |
7 | R | A | -1.4540 | |
8 | C | A | 0.0000 | |
9 | F | A | -0.4689 | |
10 | V | A | 0.0000 | |
11 | G | A | 0.0000 | |
12 | G | A | -1.5216 | |
13 | L | A | 0.0000 | |
14 | A | A | 0.0000 | |
15 | W | A | -0.0448 | |
16 | A | A | 0.0740 | |
17 | T | A | 0.0000 | |
18 | T | A | -1.4454 | |
19 | D | A | -2.9232 | |
20 | Q | A | -2.6640 | |
21 | T | A | -1.7563 | |
22 | L | A | 0.0000 | |
23 | G | A | -2.4270 | |
24 | E | A | -2.6226 | |
25 | A | A | -1.4795 | |
26 | F | A | 0.0000 | |
27 | S | A | -1.6039 | |
28 | Q | A | -1.8594 | |
29 | F | A | -1.6514 | |
30 | G | A | -2.0310 | |
31 | E | A | -2.4242 | |
32 | I | A | -1.2956 | |
33 | L | A | -0.2548 | |
34 | D | A | -1.8503 | |
35 | S | A | -2.0411 | |
36 | K | A | -2.3821 | |
37 | I | A | -1.3432 | |
38 | I | A | -1.5433 | |
39 | N | A | -3.3028 | |
40 | D | A | -3.7566 | |
41 | R | A | -3.9513 | |
42 | E | A | -3.4777 | |
43 | T | A | -2.8615 | |
44 | G | A | -3.2285 | |
45 | R | A | -3.4185 | |
46 | S | A | -2.2332 | |
47 | R | A | -2.7324 | |
48 | G | A | -0.9903 | |
49 | F | A | -0.1847 | |
50 | G | A | 0.0000 | |
51 | F | A | -0.4749 | |
52 | V | A | 0.0000 | |
53 | T | A | 0.0000 | |
54 | F | A | 0.0000 | |
55 | K | A | -2.8981 | |
56 | D | A | -3.4018 | |
57 | E | A | -3.1781 | |
58 | K | A | -3.6032 | |
59 | A | A | 0.0000 | |
60 | M | A | 0.0000 | |
61 | R | A | -4.1690 | |
62 | D | A | -3.2429 | |
63 | A | A | 0.0000 | |
64 | I | A | -2.8276 | |
65 | E | A | -3.2803 | |
66 | G | A | -2.0684 | |
67 | M | A | -2.2928 | |
68 | N | A | -2.9410 | |
69 | G | A | -2.6162 | |
70 | Q | A | -3.3344 | |
71 | D | A | -3.7366 | |
72 | L | A | -2.5342 | |
73 | D | A | -2.6740 | |
74 | G | A | -2.4833 | |
75 | R | A | -2.7199 | |
76 | N | A | -3.3424 | |
77 | I | A | 0.0000 | |
78 | T | A | -1.5609 | |
79 | V | A | 0.0000 | |
80 | N | A | -2.7329 | |
81 | E | A | -2.7933 | |
82 | A | A | 0.0000 | |
83 | Q | A | -2.6553 | |
84 | S | A | -2.1444 | |
85 | R | A | -2.5512 | |
86 | G | A | -1.8081 | |
87 | S | A | -1.4471 | |
88 | G | A | -1.4932 | |
89 | G | A | -1.2300 | |
90 | G | A | -1.3055 | |
91 | G | A | -1.1250 | |
92 | G | A | -1.1602 | |
93 | G | A | -1.2263 | |
94 | G | A | -0.8979 | |
95 | G | A | -0.6635 | |
96 | Y | A | -0.0996 | |
97 | R | A | -1.6859 | |
98 | G | A | -1.3932 | |
99 | G | A | -1.1788 | |
100 | S | A | -0.9214 | |
101 | G | A | -1.0430 | |
102 | G | A | -0.8353 | |
103 | G | A | -0.3351 | |
104 | Y | A | 0.6221 | |
105 | G | A | -0.1903 | |
106 | G | A | -0.7367 | |
107 | G | A | -1.4341 | |
108 | G | A | -2.1661 | |
109 | R | A | -3.4789 | |
110 | R | A | -3.9301 | |
111 | E | A | -3.4741 | |
112 | G | A | -1.7562 | |
113 | G | A | -0.7977 | |
114 | Y | A | 0.6392 | |
115 | G | A | -0.1516 | |
116 | G | A | -0.7828 | |
117 | G | A | -1.1571 | |
118 | G | A | -0.7464 | |
119 | G | A | -0.2350 | |
120 | Y | A | 0.6415 | |
121 | G | A | -0.4843 | |
122 | G | A | -1.0254 | |
123 | G | A | -2.1060 | |
124 | R | A | -3.5278 | |
125 | R | A | -3.9668 | |
126 | E | A | -3.5816 | |
127 | G | A | -1.7057 | |
128 | G | A | -0.5333 | |
129 | Y | A | 0.6303 | |
130 | G | A | -0.1582 | |
131 | G | A | -0.7466 | |
132 | G | A | -1.1821 | |
133 | G | A | -1.2077 | |
134 | G | A | -1.0041 | |
135 | G | A | -0.8510 | |
136 | G | A | -0.4125 | |
137 | Y | A | 0.5096 | |
138 | G | A | -0.5286 | |
139 | G | A | -1.2415 | |
140 | G | A | -2.3076 | |
141 | R | A | -3.6630 | |
142 | R | A | -4.0675 | |
143 | E | A | -3.5465 | |
144 | G | A | -2.0320 | |
145 | G | A | -0.9392 | |
146 | Y | A | 0.4080 | |
147 | G | A | -0.4067 | |
148 | G | A | -0.9967 | |
149 | G | A | -1.1839 | |
150 | S | A | -1.6372 | |
151 | E | A | -2.6076 | |
152 | G | A | -1.7215 | |
153 | N | A | -1.7965 | |
154 | W | A | -0.5072 | |
155 | R | A | -1.6668 | |
156 | S | A | -1.1435 |