Chain sequence(s) |
A: MVNIKIKEEEGKVYLEIDETSREVIEEGLKKGVELMGEDKPLRVTVQAVIPSRTVNRKKSIEGLFRTKEEQEEGIKKLVDETMKIVEEWKDEEKIIIKIKLEEVE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:03:03) [INFO] Main: Simulation completed successfully. (00:03:04) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0650 | |
2 | V | A | -0.2120 | |
3 | N | A | -1.6804 | |
4 | I | A | -1.8662 | |
5 | K | A | -2.3479 | |
6 | I | A | -1.6482 | |
7 | K | A | -2.7902 | |
8 | E | A | -3.6520 | |
9 | E | A | -4.2273 | |
10 | E | A | -3.6999 | |
11 | G | A | -2.8350 | |
12 | K | A | -3.5462 | |
13 | V | A | 0.0000 | |
14 | Y | A | -1.7136 | |
15 | L | A | 0.0000 | |
16 | E | A | -2.1672 | |
17 | I | A | 0.0000 | |
18 | D | A | -3.0321 | |
19 | E | A | -2.5642 | |
20 | T | A | -1.8397 | |
21 | S | A | -1.5881 | |
22 | R | A | -2.3267 | |
23 | E | A | -3.1071 | |
24 | V | A | 0.0000 | |
25 | I | A | 0.0000 | |
26 | E | A | -3.3248 | |
27 | E | A | -3.4028 | |
28 | G | A | 0.0000 | |
29 | L | A | 0.0000 | |
30 | K | A | -3.4785 | |
31 | K | A | -2.5250 | |
32 | G | A | 0.0000 | |
33 | V | A | 0.0000 | |
34 | E | A | -2.8186 | |
35 | L | A | -1.2514 | |
36 | M | A | 0.0000 | |
37 | G | A | -2.4223 | |
38 | E | A | -4.1131 | |
39 | D | A | -3.7626 | |
40 | K | A | -3.6198 | |
41 | P | A | -3.1292 | |
42 | L | A | 0.0000 | |
43 | R | A | -2.7788 | |
44 | V | A | 0.0000 | |
45 | T | A | -1.3083 | |
46 | V | A | 0.0000 | |
47 | Q | A | -1.1790 | |
48 | A | A | 0.0000 | |
49 | V | A | 0.0000 | |
50 | I | A | 0.0000 | |
51 | P | A | -1.6996 | |
52 | S | A | -1.3470 | |
53 | R | A | -1.6726 | |
54 | T | A | -0.5521 | |
55 | V | A | 0.1525 | |
56 | N | A | -1.7234 | |
57 | R | A | -2.7008 | |
58 | K | A | -2.6779 | |
59 | K | A | -1.8236 | |
60 | S | A | -1.3691 | |
61 | I | A | -1.3368 | |
62 | E | A | -1.9926 | |
63 | G | A | -1.2441 | |
64 | L | A | -0.9694 | |
65 | F | A | 0.0000 | |
66 | R | A | -3.5154 | |
67 | T | A | -3.2492 | |
68 | K | A | -4.2284 | |
69 | E | A | -4.1413 | |
70 | E | A | -3.5159 | |
71 | Q | A | 0.0000 | |
72 | E | A | -4.7523 | |
73 | E | A | -4.4974 | |
74 | G | A | 0.0000 | |
75 | I | A | 0.0000 | |
76 | K | A | -4.0065 | |
77 | K | A | -3.6261 | |
78 | L | A | 0.0000 | |
79 | V | A | 0.0000 | |
80 | D | A | -2.5555 | |
81 | E | A | -2.5680 | |
82 | T | A | 0.0000 | |
83 | M | A | -2.1781 | |
84 | K | A | -3.3429 | |
85 | I | A | 0.0000 | |
86 | V | A | -2.8326 | |
87 | E | A | -4.1189 | |
88 | E | A | -3.9674 | |
89 | W | A | 0.0000 | |
90 | K | A | -4.6787 | |
91 | D | A | -4.2658 | |
92 | E | A | -4.1204 | |
93 | E | A | -3.6847 | |
94 | K | A | -3.3982 | |
95 | I | A | 0.0000 | |
96 | I | A | -1.2846 | |
97 | I | A | 0.0000 | |
98 | K | A | -1.0233 | |
99 | I | A | 0.0000 | |
100 | K | A | -1.5160 | |
101 | L | A | 0.0000 | |
102 | E | A | -2.8858 | |
103 | E | A | -3.2116 | |
104 | V | A | -2.3164 | |
105 | E | A | -2.5582 |