Chain sequence(s) |
A: MADKDEAATRGNDWEVVSLTASAYAAAPGPKPVVDSKDDDHKEVTPCYEAETSHPLYMSRHFVFPPTGQLENTSDLTEASLTGSHCKEGSDLSLKGLDLSDDFGGLEFSEDKGKKEENIYTTAMSSLDDERAIGGSHVYEPVEEPTEPVSPSDVTLDLNPIKDDEVANSPPSEEAWWKRSVASLIAQAKETNTVWSICIAAAVMGIVILGQHWQQERWQILQQKWESSIGNEKAGRLMGPISRLKQAFVGGQRRDSFIRASAQNDR
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:03) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.4766 | |
2 | A | A | -0.8478 | |
3 | D | A | -2.7081 | |
4 | K | A | -3.6769 | |
5 | D | A | -3.8654 | |
6 | E | A | -2.9884 | |
7 | A | A | -1.4670 | |
8 | A | A | -1.1883 | |
9 | T | A | -1.4710 | |
10 | R | A | -2.6335 | |
11 | G | A | -2.2683 | |
12 | N | A | -2.6856 | |
13 | D | A | -2.5409 | |
14 | W | A | -0.2875 | |
15 | E | A | -0.6132 | |
16 | V | A | 1.9671 | |
17 | V | A | 2.5738 | |
18 | S | A | 1.6194 | |
19 | L | A | 2.1167 | |
20 | T | A | 0.9788 | |
21 | A | A | 0.7875 | |
22 | S | A | 0.4771 | |
23 | A | A | 0.7964 | |
24 | Y | A | 1.3520 | |
25 | A | A | 0.6168 | |
26 | A | A | 0.3482 | |
27 | A | A | 0.1475 | |
28 | P | A | -0.7581 | |
29 | G | A | -1.1575 | |
30 | P | A | -1.1703 | |
31 | K | A | -1.3717 | |
32 | P | A | -0.0818 | |
33 | V | A | 1.4542 | |
34 | V | A | 1.1898 | |
35 | D | A | -1.2365 | |
36 | S | A | -1.8041 | |
37 | K | A | -3.5550 | |
38 | D | A | -4.1851 | |
39 | D | A | -4.1873 | |
40 | D | A | -4.1107 | |
41 | H | A | -3.3147 | |
42 | K | A | -3.0185 | |
43 | E | A | -2.0558 | |
44 | V | A | 0.3485 | |
45 | T | A | 0.3896 | |
46 | P | A | 0.3852 | |
47 | C | A | 0.9521 | |
48 | Y | A | 0.4630 | |
49 | E | A | -1.4891 | |
50 | A | A | -1.2921 | |
51 | E | A | -2.3436 | |
52 | T | A | -1.6050 | |
53 | S | A | -1.0817 | |
54 | H | A | -0.8947 | |
55 | P | A | 0.4548 | |
56 | L | A | 2.0262 | |
57 | Y | A | 2.0624 | |
58 | M | A | 1.3742 | |
59 | S | A | -0.0615 | |
60 | R | A | -1.0688 | |
61 | H | A | -0.1266 | |
62 | F | A | 2.2873 | |
63 | V | A | 2.9331 | |
64 | F | A | 3.0428 | |
65 | P | A | 1.2121 | |
66 | P | A | 0.0507 | |
67 | T | A | -0.2371 | |
68 | G | A | -1.0712 | |
69 | Q | A | -1.4584 | |
70 | L | A | -0.3647 | |
71 | E | A | -2.1609 | |
72 | N | A | -2.1995 | |
73 | T | A | -1.4544 | |
74 | S | A | -1.3121 | |
75 | D | A | -1.2901 | |
76 | L | A | 0.1929 | |
77 | T | A | -0.6362 | |
78 | E | A | -1.3672 | |
79 | A | A | -0.7225 | |
80 | S | A | 0.0593 | |
81 | L | A | 1.0767 | |
82 | T | A | 0.3859 | |
83 | G | A | -0.4505 | |
84 | S | A | -0.6318 | |
85 | H | A | -1.2070 | |
86 | C | A | -1.0381 | |
87 | K | A | -2.6473 | |
88 | E | A | -2.8225 | |
89 | G | A | -2.0447 | |
90 | S | A | -1.5606 | |
91 | D | A | -1.1206 | |
92 | L | A | 0.6916 | |
93 | S | A | 0.2189 | |
94 | L | A | 0.9642 | |
95 | K | A | -0.9215 | |
96 | G | A | -0.4491 | |
97 | L | A | 0.6883 | |
98 | D | A | -0.9511 | |
99 | L | A | 0.3333 | |
100 | S | A | -0.9036 | |
101 | D | A | -2.2648 | |
102 | D | A | -1.7508 | |
103 | F | A | 0.5009 | |
104 | G | A | -0.3600 | |
105 | G | A | 0.0772 | |
106 | L | A | 1.0853 | |
107 | E | A | -0.5619 | |
108 | F | A | 0.6405 | |
109 | S | A | -1.1602 | |
110 | E | A | -3.0060 | |
111 | D | A | -3.6011 | |
112 | K | A | -3.6318 | |
113 | G | A | -3.1849 | |
114 | K | A | -3.7266 | |
115 | K | A | -4.0969 | |
116 | E | A | -4.0204 | |
117 | E | A | -3.0564 | |
118 | N | A | -1.4433 | |
119 | I | A | 1.2788 | |
120 | Y | A | 1.7085 | |
121 | T | A | 0.9769 | |
122 | T | A | 0.7773 | |
123 | A | A | 0.5953 | |
124 | M | A | 1.1168 | |
125 | S | A | 0.3254 | |
126 | S | A | 0.0470 | |
127 | L | A | 0.2060 | |
128 | D | A | -2.3345 | |
129 | D | A | -3.6882 | |
130 | E | A | -4.0390 | |
131 | R | A | -2.7476 | |
132 | A | A | -0.4101 | |
133 | I | A | 1.2960 | |
134 | G | A | 0.4189 | |
135 | G | A | -0.3666 | |
136 | S | A | -0.5754 | |
137 | H | A | -0.2544 | |
138 | V | A | 1.4790 | |
139 | Y | A | 1.0090 | |
140 | E | A | -0.6912 | |
141 | P | A | -0.3965 | |
142 | V | A | 0.0156 | |
143 | E | A | -2.0463 | |
144 | E | A | -2.5650 | |
145 | P | A | -2.0106 | |
146 | T | A | -1.4855 | |
147 | E | A | -1.6683 | |
148 | P | A | -0.4696 | |
149 | V | A | 1.0980 | |
150 | S | A | 0.3975 | |
151 | P | A | -0.4452 | |
152 | S | A | -0.9256 | |
153 | D | A | -0.9029 | |
154 | V | A | 0.9471 | |
155 | T | A | 0.7393 | |
156 | L | A | 1.1627 | |
157 | D | A | -0.5009 | |
158 | L | A | 0.6911 | |
159 | N | A | -0.6087 | |
160 | P | A | -0.3018 | |
161 | I | A | 0.3489 | |
162 | K | A | -2.5100 | |
163 | D | A | -3.3526 | |
164 | D | A | -3.4439 | |
165 | E | A | -2.5539 | |
166 | V | A | 0.0306 | |
167 | A | A | -0.3360 | |
168 | N | A | -1.2174 | |
169 | S | A | -0.8211 | |
170 | P | A | -1.1056 | |
171 | P | A | -1.5040 | |
172 | S | A | -1.8448 | |
173 | E | A | -2.8690 | |
174 | E | A | -3.0247 | |
175 | A | A | -1.4444 | |
176 | W | A | -0.0141 | |
177 | W | A | 0.2905 | |
178 | K | A | -1.8542 | |
179 | R | A | -1.8467 | |
180 | S | A | 0.1185 | |
181 | V | A | 1.0916 | |
182 | A | A | 0.5217 | |
183 | S | A | 0.5490 | |
184 | L | A | 1.9346 | |
185 | I | A | 2.3269 | |
186 | A | A | 0.4730 | |
187 | Q | A | -0.7339 | |
188 | A | A | -0.7863 | |
189 | K | A | -2.7861 | |
190 | E | A | -2.9168 | |
191 | T | A | -1.4796 | |
192 | N | A | -1.0490 | |
193 | T | A | 0.5111 | |
194 | V | A | 2.2445 | |
195 | W | A | 2.5802 | |
196 | S | A | 2.4166 | |
197 | I | A | 3.7491 | |
198 | C | A | 3.7239 | |
199 | I | A | 4.0323 | |
200 | A | A | 3.2383 | |
201 | A | A | 2.8428 | |
202 | A | A | 3.2121 | |
203 | V | A | 4.4415 | |
204 | M | A | 3.9144 | |
205 | G | A | 3.2650 | |
206 | I | A | 4.1764 | |
207 | V | A | 3.8504 | |
208 | I | A | 3.6287 | |
209 | L | A | 3.0018 | |
210 | G | A | 1.1011 | |
211 | Q | A | -0.6811 | |
212 | H | A | -0.7572 | |
213 | W | A | -0.7114 | |
214 | Q | A | -1.9575 | |
215 | Q | A | -2.4531 | |
216 | E | A | -2.1498 | |
217 | R | A | -1.9035 | |
218 | W | A | -0.8058 | |
219 | Q | A | -1.3775 | |
220 | I | A | -0.1261 | |
221 | L | A | -0.3352 | |
222 | Q | A | -1.8221 | |
223 | Q | A | -2.3106 | |
224 | K | A | -1.8579 | |
225 | W | A | -0.6524 | |
226 | E | A | -1.8855 | |
227 | S | A | -1.5829 | |
228 | S | A | -0.5882 | |
229 | I | A | 0.5832 | |
230 | G | A | -1.3043 | |
231 | N | A | -2.5227 | |
232 | E | A | -3.3975 | |
233 | K | A | -3.4016 | |
234 | A | A | -1.6172 | |
235 | G | A | -1.6116 | |
236 | R | A | -1.5918 | |
237 | L | A | 0.8907 | |
238 | M | A | 1.5220 | |
239 | G | A | 0.2063 | |
240 | P | A | 0.5844 | |
241 | I | A | 1.4634 | |
242 | S | A | -0.3110 | |
243 | R | A | -1.3517 | |
244 | L | A | 0.3434 | |
245 | K | A | -1.1375 | |
246 | Q | A | -1.3059 | |
247 | A | A | 0.3721 | |
248 | F | A | 2.0986 | |
249 | V | A | 1.9214 | |
250 | G | A | 0.1979 | |
251 | G | A | -1.5987 | |
252 | Q | A | -2.6943 | |
253 | R | A | -3.9313 | |
254 | R | A | -4.0691 | |
255 | D | A | -2.7986 | |
256 | S | A | -0.6877 | |
257 | F | A | 1.9399 | |
258 | I | A | 1.9189 | |
259 | R | A | -0.3098 | |
260 | A | A | -0.2470 | |
261 | S | A | -0.6064 | |
262 | A | A | -0.9257 | |
263 | Q | A | -2.4578 | |
264 | N | A | -3.2219 | |
265 | D | A | -3.6640 | |
266 | R | A | -3.0938 |