Project name: 69c9727f695a1c7 [mutate: VR5A]

Status: done

Started: 2026-04-13 10:10:20
Chain sequence(s) A: DVQLVESGGGLVQAGGSLRLSCTVSTSRFSGVGRMAWYRQAPGKQREKVAEITRAGSRTYADAVKGRFTISRDNAKNTVYLQMDRLKPEDTAVYWCVRARWQSGTPRTPGTQVTVSS
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Mutated residues VR5A
Energy difference between WT (input) and mutated protein (by FoldX) -0.603182 kcal/mol
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Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:04)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:04)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:04)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:04)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:05)
[INFO]       FoldX:    Building mutant model                                                       (00:00:41)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:57)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-2.9849
Maximal score value
0.931
Average score
-1.1636
Total score value
-136.1396

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 D A -1.8697
2 V A -1.5843
3 Q A -1.9070
4 L A -1.8386
5 R A -2.2374 mutated: VR5A
6 E A 0.0000
7 S A -1.1860
8 G A -1.0002
9 G A -0.8367
10 G A -0.0896
11 L A 0.9310
12 V A 0.0000
13 Q A -1.4345
14 A A -1.7682
15 G A -1.8720
16 G A -1.3966
17 S A -1.8319
18 L A -1.4463
19 R A -2.3122
20 L A 0.0000
21 S A -0.9977
22 C A 0.0000
23 T A -1.2334
24 V A 0.0000
25 S A -1.3184
26 T A -1.2805
27 S A -1.2263
28 R A -2.2608
29 F A 0.0000
30 S A -1.7047
31 G A -1.7404
32 V A 0.0000
33 G A -2.0071
34 R A -2.5660
35 M A 0.0000
36 A A 0.0000
37 W A 0.0000
38 Y A -0.5876
39 R A 0.0000
40 Q A -1.9327
41 A A -1.8178
42 P A -1.3103
43 G A -1.8187
44 K A -2.9849
45 Q A -2.7837
46 R A -2.2543
47 E A -2.1629
48 K A -1.2387
49 V A 0.0000
50 A A 0.0000
51 E A 0.0000
52 I A 0.0000
53 T A -2.1085
54 R A -2.7593
55 A A -1.4600
56 G A -1.6385
57 S A -1.5628
58 R A -1.9870
59 T A -1.2708
60 Y A -1.3102
61 A A -1.5415
62 D A -2.4050
63 A A -1.5999
64 V A 0.0000
65 K A -2.5815
66 G A -2.0039
67 R A -2.1516
68 F A 0.0000
69 T A -1.2183
70 I A 0.0000
71 S A -0.8795
72 R A -1.6193
73 D A -1.6831
74 N A -2.3193
75 A A -1.4835
76 K A -2.2757
77 N A -1.9506
78 T A 0.0000
79 V A 0.0000
80 Y A -0.7644
81 L A 0.0000
82 Q A -1.6683
83 M A 0.0000
84 D A -2.6160
85 R A -2.9340
86 L A 0.0000
87 K A -2.7354
88 P A -1.8670
89 E A -2.3112
90 D A 0.0000
91 T A -0.9489
92 A A 0.0000
93 V A -0.3751
94 Y A 0.0000
95 W A -0.6202
96 C A 0.0000
97 V A 0.0000
98 R A -2.1773
99 A A 0.0000
100 R A -2.6351
101 W A -1.6442
102 Q A -1.8517
103 S A -1.0426
104 G A -0.8453
105 T A -0.8740
106 P A -1.0310
107 R A -2.2307
108 T A 0.0000
109 P A -1.0164
110 G A -0.9754
111 T A -0.9664
112 Q A -1.0637
113 V A 0.0000
114 T A -0.3552
115 V A 0.0000
116 S A -0.8090
117 S A -1.0642
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