| Chain sequence(s) |
A: NQYQRGPAPTATTLQAAMGPFAVASSVVSSTAAQGYGGGTIYYPTNTTEGPFAAIAVVPGFVSPQSSIQQWGPRLASWGFVVITITTNSGSDQPASRATQLEAALDQVVGYSNSSTHVIRGKVDPTRLGAAGWSMGGGGTLILLDREPTKLKAGMTFAPWNSSTNFSGVNQPALIFACENDGTAPVSSHAYPFYVSMPNTNDKAFAEVNGGGHSCANDPRNNSGILGRYGVSWMKRFLDNDTRFNDFLCGSPHQTIVSGSTFSRYLSTCPY
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| pH calculations | No |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | Yes |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] FoldX: Starting FoldX energy minimization (00:00:01)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:01:14)
[INFO] AutoMut: Residue number 62 from chain A and a score of 1.952 (valine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 27 from chain A and a score of 1.649 (valine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 195 from chain A and a score of 1.495 (valine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 61 from chain A and a score of 1.420 (phenylalanine)
selected for automated mutation (00:01:15)
[INFO] AutoMut: Residue number 26 from chain A and a score of 1.005 (serine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 118 from chain A and a score of 0.957 (valine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 63 from chain A and a score of 0.860 (serine) selected for
automated mutation (00:01:15)
[INFO] AutoMut: Residue number 191 from chain A and a score of 0.820 (tyrosine) selected
for automated mutation (00:01:15)
[INFO] AutoMut: Mutating residue number 62 from chain A (valine) into glutamic acid (00:01:15)
[INFO] AutoMut: Mutating residue number 62 from chain A (valine) into arginine (00:01:15)
[INFO] AutoMut: Mutating residue number 27 from chain A (valine) into aspartic acid (00:01:15)
[INFO] AutoMut: Mutating residue number 27 from chain A (valine) into arginine (00:01:24)
[INFO] AutoMut: Mutating residue number 62 from chain A (valine) into lysine (00:01:25)
[INFO] AutoMut: Mutating residue number 27 from chain A (valine) into glutamic acid (00:01:28)
[INFO] AutoMut: Mutating residue number 27 from chain A (valine) into lysine (00:01:35)
[INFO] AutoMut: Mutating residue number 62 from chain A (valine) into aspartic acid (00:01:38)
[INFO] AutoMut: Mutating residue number 195 from chain A (valine) into glutamic acid (00:01:43)
[INFO] AutoMut: Mutating residue number 195 from chain A (valine) into lysine (00:01:45)
[INFO] AutoMut: Mutating residue number 61 from chain A (phenylalanine) into glutamic acid
Mutating residue number 61 from chain A (phenylalanine) into glutamic acid (00:01:54)
[INFO] AutoMut: Mutating residue number 195 from chain A (valine) into aspartic acid (00:01:54)
[INFO] AutoMut: Mutating residue number 61 from chain A (phenylalanine) into arginine (00:02:00)
[INFO] AutoMut: Mutating residue number 195 from chain A (valine) into arginine (00:02:01)
[INFO] AutoMut: Mutating residue number 61 from chain A (phenylalanine) into lysine (00:02:06)
[INFO] AutoMut: Mutating residue number 26 from chain A (serine) into glutamic acid (00:02:10)
[INFO] AutoMut: Mutating residue number 26 from chain A (serine) into aspartic acid (00:02:13)
[INFO] AutoMut: Mutating residue number 26 from chain A (serine) into lysine (00:02:16)
[INFO] AutoMut: Mutating residue number 61 from chain A (phenylalanine) into aspartic acid
Mutating residue number 61 from chain A (phenylalanine) into aspartic acid (00:02:17)
[INFO] AutoMut: Mutating residue number 26 from chain A (serine) into arginine (00:02:20)
[INFO] AutoMut: Mutating residue number 118 from chain A (valine) into lysine (00:02:24)
[INFO] AutoMut: Mutating residue number 63 from chain A (serine) into glutamic acid (00:02:28)
[INFO] AutoMut: Mutating residue number 118 from chain A (valine) into glutamic acid (00:02:29)
[INFO] AutoMut: Mutating residue number 63 from chain A (serine) into lysine (00:02:36)
[INFO] AutoMut: Mutating residue number 118 from chain A (valine) into aspartic acid (00:02:42)
[INFO] AutoMut: Mutating residue number 63 from chain A (serine) into arginine (00:02:43)
[INFO] AutoMut: Mutating residue number 63 from chain A (serine) into aspartic acid (00:02:46)
[INFO] AutoMut: Mutating residue number 191 from chain A (tyrosine) into glutamic acid (00:02:51)
[INFO] AutoMut: Mutating residue number 118 from chain A (valine) into arginine (00:02:53)
[INFO] AutoMut: Mutating residue number 191 from chain A (tyrosine) into aspartic acid (00:02:54)
[INFO] AutoMut: Mutating residue number 191 from chain A (tyrosine) into arginine (00:03:02)
[INFO] AutoMut: Mutating residue number 191 from chain A (tyrosine) into lysine (00:03:08)
[INFO] AutoMut: Effect of mutation residue number 62 from chain A (valine) into glutamic
acid: Energy difference: -0.7252 kcal/mol, Difference in average score from
the base case: -0.0464 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 62 from chain A (valine) into lysine:
Energy difference: -0.5817 kcal/mol, Difference in average score from the
base case: -0.0412 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 62 from chain A (valine) into aspartic
acid: Energy difference: -0.2605 kcal/mol, Difference in average score from
the base case: -0.0385 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 62 from chain A (valine) into arginine:
Energy difference: -0.6784 kcal/mol, Difference in average score from the
base case: -0.0410 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 27 from chain A (valine) into glutamic
acid: Energy difference: -0.1937 kcal/mol, Difference in average score from
the base case: -0.0368 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 27 from chain A (valine) into lysine:
Energy difference: -0.3148 kcal/mol, Difference in average score from the
base case: -0.0397 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 27 from chain A (valine) into aspartic
acid: Energy difference: -0.9543 kcal/mol, Difference in average score from
the base case: -0.0459 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 27 from chain A (valine) into arginine:
Energy difference: -0.4051 kcal/mol, Difference in average score from the
base case: -0.0440 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 195 from chain A (valine) into glutamic
acid: Energy difference: -0.5386 kcal/mol, Difference in average score from
the base case: -0.0409 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 195 from chain A (valine) into lysine:
Energy difference: -0.5333 kcal/mol, Difference in average score from the
base case: -0.0399 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 195 from chain A (valine) into aspartic
acid: Energy difference: 0.3773 kcal/mol, Difference in average score from
the base case: -0.0390 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 195 from chain A (valine) into arginine:
Energy difference: -0.5134 kcal/mol, Difference in average score from the
base case: -0.0423 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 61 from chain A (phenylalanine) into
glutamic acid: Energy difference: -0.9033 kcal/mol, Difference in average
score from the base case: -0.0175 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 61 from chain A (phenylalanine) into
lysine: Energy difference: 0.6741 kcal/mol, Difference in average score
from the base case: -0.0265 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 61 from chain A (phenylalanine) into
aspartic acid: Energy difference: 1.0605 kcal/mol, Difference in average
score from the base case: -0.0194 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 61 from chain A (phenylalanine) into
arginine: Energy difference: 0.8740 kcal/mol, Difference in average score
from the base case: -0.0365 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 26 from chain A (serine) into glutamic
acid: Energy difference: -0.6711 kcal/mol, Difference in average score from
the base case: -0.0122 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 26 from chain A (serine) into lysine:
Energy difference: -1.6874 kcal/mol, Difference in average score from the
base case: -0.0089 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 26 from chain A (serine) into aspartic
acid: Energy difference: -0.9783 kcal/mol, Difference in average score from
the base case: -0.0019 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 26 from chain A (serine) into arginine:
Energy difference: -1.2021 kcal/mol, Difference in average score from the
base case: -0.0229 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 118 from chain A (valine) into glutamic
acid: Energy difference: -0.7054 kcal/mol, Difference in average score from
the base case: -0.0382 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 118 from chain A (valine) into lysine:
Energy difference: -0.3506 kcal/mol, Difference in average score from the
base case: -0.0388 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 118 from chain A (valine) into aspartic
acid: Energy difference: -0.8295 kcal/mol, Difference in average score from
the base case: -0.0404 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 118 from chain A (valine) into arginine:
Energy difference: -0.3124 kcal/mol, Difference in average score from the
base case: -0.0411 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 63 from chain A (serine) into glutamic
acid: Energy difference: 0.5000 kcal/mol, Difference in average score from
the base case: -0.0094 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 63 from chain A (serine) into lysine:
Energy difference: 0.0031 kcal/mol, Difference in average score from the
base case: -0.0131 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 63 from chain A (serine) into aspartic
acid: Energy difference: 1.4824 kcal/mol, Difference in average score from
the base case: -0.0070 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 63 from chain A (serine) into arginine:
Energy difference: 0.3375 kcal/mol, Difference in average score from the
base case: -0.0232 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 191 from chain A (tyrosine) into glutamic
acid: Energy difference: 2.8785 kcal/mol, Difference in average score from
the base case: -0.0100 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 191 from chain A (tyrosine) into lysine:
Energy difference: 2.3859 kcal/mol, Difference in average score from the
base case: -0.0149 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 191 from chain A (tyrosine) into aspartic
acid: Energy difference: 3.6454 kcal/mol, Difference in average score from
the base case: -0.0088 (00:03:37)
[INFO] AutoMut: Effect of mutation residue number 191 from chain A (tyrosine) into
arginine: Energy difference: 2.6020 kcal/mol, Difference in average score
from the base case: -0.0202 (00:03:37)
[INFO] Main: Simulation completed successfully. (00:03:44)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 1 | N | A | -2.1445 | |
| 2 | Q | A | -1.9592 | |
| 3 | Y | A | -1.3053 | |
| 4 | Q | A | -1.5676 | |
| 5 | R | A | -0.9927 | |
| 6 | G | A | -0.6030 | |
| 7 | P | A | -0.4531 | |
| 8 | A | A | -0.2883 | |
| 9 | P | A | 0.0000 | |
| 10 | T | A | -0.3457 | |
| 11 | A | A | -0.2966 | |
| 12 | T | A | -0.2112 | |
| 13 | T | A | -0.1558 | |
| 14 | L | A | 0.0000 | |
| 15 | Q | A | -0.8710 | |
| 16 | A | A | -0.3877 | |
| 17 | A | A | -0.3643 | |
| 18 | M | A | 0.2430 | |
| 19 | G | A | 0.0540 | |
| 20 | P | A | -0.1381 | |
| 21 | F | A | 0.0000 | |
| 22 | A | A | -0.0357 | |
| 23 | V | A | 0.2086 | |
| 24 | A | A | 0.1560 | |
| 25 | S | A | 0.4838 | |
| 26 | S | A | 1.0052 | |
| 27 | V | A | 1.6486 | |
| 28 | V | A | 0.0000 | |
| 29 | S | A | 0.1063 | |
| 30 | S | A | -0.5284 | |
| 31 | T | A | -0.4025 | |
| 32 | A | A | -0.2667 | |
| 33 | A | A | -0.7845 | |
| 34 | Q | A | -1.7078 | |
| 35 | G | A | -1.6150 | |
| 36 | Y | A | 0.0000 | |
| 37 | G | A | -1.0778 | |
| 38 | G | A | 0.0000 | |
| 39 | G | A | 0.0000 | |
| 40 | T | A | 0.5174 | |
| 41 | I | A | 0.0000 | |
| 42 | Y | A | 0.0000 | |
| 43 | Y | A | 0.0000 | |
| 44 | P | A | 0.0000 | |
| 45 | T | A | -0.6759 | |
| 46 | N | A | -1.3532 | |
| 47 | T | A | -1.0084 | |
| 48 | T | A | -0.9190 | |
| 49 | E | A | -1.3779 | |
| 50 | G | A | -0.9390 | |
| 51 | P | A | -0.9406 | |
| 52 | F | A | 0.0000 | |
| 53 | A | A | 0.0000 | |
| 54 | A | A | 0.0000 | |
| 55 | I | A | 0.0000 | |
| 56 | A | A | 0.0000 | |
| 57 | V | A | 0.0000 | |
| 58 | V | A | 0.0000 | |
| 59 | P | A | 0.0000 | |
| 60 | G | A | 0.0000 | |
| 61 | F | A | 1.4201 | |
| 62 | V | A | 1.9521 | |
| 63 | S | A | 0.8600 | |
| 64 | P | A | -0.0453 | |
| 65 | Q | A | -0.6341 | |
| 66 | S | A | -0.7035 | |
| 67 | S | A | -0.5696 | |
| 68 | I | A | 0.0000 | |
| 69 | Q | A | -1.0346 | |
| 70 | Q | A | -1.1646 | |
| 71 | W | A | 0.0000 | |
| 72 | G | A | 0.0000 | |
| 73 | P | A | -0.1171 | |
| 74 | R | A | 0.0000 | |
| 75 | L | A | 0.0000 | |
| 76 | A | A | 0.0000 | |
| 77 | S | A | 0.0000 | |
| 78 | W | A | 0.0000 | |
| 79 | G | A | 0.0000 | |
| 80 | F | A | 0.0000 | |
| 81 | V | A | 0.0000 | |
| 82 | V | A | 0.0000 | |
| 83 | I | A | 0.0000 | |
| 84 | T | A | 0.0000 | |
| 85 | I | A | 0.0000 | |
| 86 | T | A | -0.5912 | |
| 87 | T | A | 0.0000 | |
| 88 | N | A | -1.5864 | |
| 89 | S | A | -0.7060 | |
| 90 | G | A | 0.1819 | |
| 91 | S | A | -0.1280 | |
| 92 | D | A | -0.7431 | |
| 93 | Q | A | -1.1847 | |
| 94 | P | A | 0.0000 | |
| 95 | A | A | -0.3353 | |
| 96 | S | A | -0.7781 | |
| 97 | R | A | 0.0000 | |
| 98 | A | A | 0.0000 | |
| 99 | T | A | -0.5405 | |
| 100 | Q | A | 0.0000 | |
| 101 | L | A | 0.0000 | |
| 102 | E | A | -1.6246 | |
| 103 | A | A | -1.4471 | |
| 104 | A | A | 0.0000 | |
| 105 | L | A | 0.0000 | |
| 106 | D | A | -2.2023 | |
| 107 | Q | A | 0.0000 | |
| 108 | V | A | 0.0000 | |
| 109 | V | A | -1.1989 | |
| 110 | G | A | -1.2899 | |
| 111 | Y | A | -0.9082 | |
| 112 | S | A | 0.0000 | |
| 113 | N | A | -2.0489 | |
| 114 | S | A | -1.1859 | |
| 115 | S | A | -0.9532 | |
| 116 | T | A | -0.4092 | |
| 117 | H | A | -0.2751 | |
| 118 | V | A | 0.9570 | |
| 119 | I | A | 0.0000 | |
| 120 | R | A | -2.0655 | |
| 121 | G | A | -1.5837 | |
| 122 | K | A | -1.2031 | |
| 123 | V | A | 0.0000 | |
| 124 | D | A | -0.4072 | |
| 125 | P | A | -0.7716 | |
| 126 | T | A | -0.4091 | |
| 127 | R | A | 0.0000 | |
| 128 | L | A | 0.0000 | |
| 129 | G | A | 0.0000 | |
| 130 | A | A | 0.0000 | |
| 131 | A | A | 0.0000 | |
| 132 | G | A | 0.0000 | |
| 133 | W | A | 0.2626 | |
| 134 | S | A | 0.0000 | |
| 135 | M | A | 0.3764 | |
| 136 | G | A | 0.0000 | |
| 137 | G | A | 0.0000 | |
| 138 | G | A | 0.0000 | |
| 139 | G | A | 0.0000 | |
| 140 | T | A | 0.0000 | |
| 141 | L | A | 0.0000 | |
| 142 | I | A | -0.7820 | |
| 143 | L | A | 0.0000 | |
| 144 | L | A | 0.0000 | |
| 145 | D | A | -2.3204 | |
| 146 | R | A | -2.2741 | |
| 147 | E | A | -1.8848 | |
| 148 | P | A | -1.7428 | |
| 149 | T | A | -1.1034 | |
| 150 | K | A | -1.1855 | |
| 151 | L | A | 0.0000 | |
| 152 | K | A | -1.0168 | |
| 153 | A | A | 0.0000 | |
| 154 | G | A | 0.0000 | |
| 155 | M | A | 0.0000 | |
| 156 | T | A | 0.0000 | |
| 157 | F | A | 0.0000 | |
| 158 | A | A | 0.0000 | |
| 159 | P | A | 0.0000 | |
| 160 | W | A | 0.1801 | |
| 161 | N | A | 0.0000 | |
| 162 | S | A | -0.5381 | |
| 163 | S | A | -0.6307 | |
| 164 | T | A | -0.5448 | |
| 165 | N | A | -1.2497 | |
| 166 | F | A | 0.0000 | |
| 167 | S | A | -1.1216 | |
| 168 | G | A | -1.6621 | |
| 169 | V | A | 0.0000 | |
| 170 | N | A | -2.0452 | |
| 171 | Q | A | 0.0000 | |
| 172 | P | A | -0.6154 | |
| 173 | A | A | 0.0000 | |
| 174 | L | A | 0.0000 | |
| 175 | I | A | 0.0000 | |
| 176 | F | A | 0.0000 | |
| 177 | A | A | 0.0000 | |
| 178 | C | A | 0.0000 | |
| 179 | E | A | -2.2344 | |
| 180 | N | A | -2.2904 | |
| 181 | D | A | 0.0000 | |
| 182 | G | A | -1.0957 | |
| 183 | T | A | -0.5567 | |
| 184 | A | A | 0.0000 | |
| 185 | P | A | -0.7929 | |
| 186 | V | A | 0.0000 | |
| 187 | S | A | -0.3293 | |
| 188 | S | A | -0.2636 | |
| 189 | H | A | -0.1255 | |
| 190 | A | A | 0.0000 | |
| 191 | Y | A | 0.8195 | |
| 192 | P | A | 0.4476 | |
| 193 | F | A | 0.0000 | |
| 194 | Y | A | 0.0000 | |
| 195 | V | A | 1.4950 | |
| 196 | S | A | 0.1540 | |
| 197 | M | A | 0.0000 | |
| 198 | P | A | -0.8635 | |
| 199 | N | A | -1.3571 | |
| 200 | T | A | -1.0348 | |
| 201 | N | A | 0.0000 | |
| 202 | D | A | -0.9319 | |
| 203 | K | A | 0.0000 | |
| 204 | A | A | 0.0000 | |
| 205 | F | A | 0.0000 | |
| 206 | A | A | 0.0000 | |
| 207 | E | A | 0.0000 | |
| 208 | V | A | 0.0000 | |
| 209 | N | A | -1.8342 | |
| 210 | G | A | -1.6614 | |
| 211 | G | A | 0.0000 | |
| 212 | G | A | -1.3735 | |
| 213 | H | A | -0.8609 | |
| 214 | S | A | -0.3462 | |
| 215 | C | A | -0.8409 | |
| 216 | A | A | 0.0000 | |
| 217 | N | A | 0.0000 | |
| 218 | D | A | -1.3522 | |
| 219 | P | A | 0.0000 | |
| 220 | R | A | -2.4931 | |
| 221 | N | A | -1.9709 | |
| 222 | N | A | -1.6681 | |
| 223 | S | A | -1.3435 | |
| 224 | G | A | 0.0000 | |
| 225 | I | A | 0.0000 | |
| 226 | L | A | 0.0000 | |
| 227 | G | A | 0.0000 | |
| 228 | R | A | 0.0000 | |
| 229 | Y | A | 0.0000 | |
| 230 | G | A | 0.0000 | |
| 231 | V | A | 0.0000 | |
| 232 | S | A | 0.0000 | |
| 233 | W | A | 0.0000 | |
| 234 | M | A | 0.0000 | |
| 235 | K | A | 0.0000 | |
| 236 | R | A | -0.7372 | |
| 237 | F | A | -0.5358 | |
| 238 | L | A | 0.0000 | |
| 239 | D | A | 0.0000 | |
| 240 | N | A | -1.7829 | |
| 241 | D | A | 0.0000 | |
| 242 | T | A | -1.1547 | |
| 243 | R | A | -1.1638 | |
| 244 | F | A | 0.0000 | |
| 245 | N | A | -1.0299 | |
| 246 | D | A | -1.7653 | |
| 247 | F | A | 0.0000 | |
| 248 | L | A | 0.0000 | |
| 249 | C | A | -0.6617 | |
| 250 | G | A | -1.1395 | |
| 251 | S | A | -0.9721 | |
| 252 | P | A | -0.8287 | |
| 253 | H | A | 0.0000 | |
| 254 | Q | A | -1.3324 | |
| 255 | T | A | -0.6492 | |
| 256 | I | A | -0.1962 | |
| 257 | V | A | -0.1495 | |
| 258 | S | A | -0.4987 | |
| 259 | G | A | -0.6040 | |
| 260 | S | A | -0.7237 | |
| 261 | T | A | 0.0000 | |
| 262 | F | A | 0.0000 | |
| 263 | S | A | -0.9779 | |
| 264 | R | A | -0.6006 | |
| 265 | Y | A | 0.2088 | |
| 266 | L | A | 0.6374 | |
| 267 | S | A | -0.0410 | |
| 268 | T | A | -0.3274 | |
| 269 | C | A | 0.1011 | |
| 270 | P | A | -0.2411 | |
| 271 | Y | A | -0.1539 |
Automated mutations analysis - charged mutations
In the automated mutations mode, the server selects aggregation prone resides
and each selected residue is mutated to glutamic acid, lysine, aspartic acid and arginine.
The table below shows 2 best scored mutants for each mutated residue. Protein variants
are ordered according to the mutation effect they had on protein stability
(energetic effect) together with the difference in the average per-residue aggregation score
between the wild type and the mutant (in the table green values indicate a positive change,
grey are neutral, and orange/red mean destabilizing or more aggregation prone mutants).
Summary for all the mutants can be found in this
CSV file .
Mutant |
Energetic effect |
Score comparison |
|||
| VD27A | -0.9543 | -0.0459 | View | CSV | PDB |
| VE62A | -0.7252 | -0.0464 | View | CSV | PDB |
| VD118A | -0.8295 | -0.0404 | View | CSV | PDB |
| VR62A | -0.6784 | -0.041 | View | CSV | PDB |
| VE118A | -0.7054 | -0.0382 | View | CSV | PDB |
| VR195A | -0.5134 | -0.0423 | View | CSV | PDB |
| VE195A | -0.5386 | -0.0409 | View | CSV | PDB |
| VR27A | -0.4051 | -0.044 | View | CSV | PDB |
| SR26A | -1.2021 | -0.0229 | View | CSV | PDB |
| FE61A | -0.9033 | -0.0175 | View | CSV | PDB |
| SK26A | -1.6874 | -0.0089 | View | CSV | PDB |
| SK63A | 0.0031 | -0.0131 | View | CSV | PDB |
| SR63A | 0.3375 | -0.0232 | View | CSV | PDB |
| FR61A | 0.874 | -0.0365 | View | CSV | PDB |
| YR191A | 2.602 | -0.0202 | View | CSV | PDB |
| YK191A | 2.3859 | -0.0149 | View | CSV | PDB |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine