Chain sequence(s) |
A: MKKLTIILHRNGETYTFETELDERSVTESPDGRITLEVFLHEGTLSVLLRNAVQADEGEYEVIVDGLTNRNEGKVKDGVIELTLSKEVLESILKNPETTIEIRQL
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LK105A,VR26A |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.38826 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:01) [INFO] FoldX: Building mutant model (00:00:42) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:51) [INFO] Main: Simulation completed successfully. (00:00:52) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | -0.2237 | |
2 | K | A | -1.7860 | |
3 | K | A | -2.8793 | |
4 | L | A | 0.0000 | |
5 | T | A | -1.5054 | |
6 | I | A | 0.0000 | |
7 | I | A | -0.3317 | |
8 | L | A | 0.0000 | |
9 | H | A | -1.7796 | |
10 | R | A | 0.0000 | |
11 | N | A | -2.2432 | |
12 | G | A | -1.7646 | |
13 | E | A | -1.6391 | |
14 | T | A | -0.9850 | |
15 | Y | A | 0.0000 | |
16 | T | A | -0.6598 | |
17 | F | A | 0.0000 | |
18 | E | A | -2.6671 | |
19 | T | A | -2.6131 | |
20 | E | A | -3.3146 | |
21 | L | A | -2.1657 | |
22 | D | A | -3.5959 | |
23 | E | A | -3.6895 | |
24 | R | A | -3.4785 | |
25 | S | A | -2.6689 | |
26 | R | A | -3.0525 | mutated: VR26A |
27 | T | A | -2.3796 | |
28 | E | A | -3.2321 | |
29 | S | A | 0.0000 | |
30 | P | A | -1.9345 | |
31 | D | A | -2.8201 | |
32 | G | A | -2.6456 | |
33 | R | A | -2.7364 | |
34 | I | A | 0.0000 | |
35 | T | A | -2.0200 | |
36 | L | A | 0.0000 | |
37 | E | A | 0.0000 | |
38 | V | A | 0.0000 | |
39 | F | A | -1.1818 | |
40 | L | A | -1.7525 | |
41 | H | A | -2.4609 | |
42 | E | A | -2.5263 | |
43 | G | A | -1.8337 | |
44 | T | A | -1.2178 | |
45 | L | A | 0.0000 | |
46 | S | A | 0.0000 | |
47 | V | A | 0.0000 | |
48 | L | A | -0.5024 | |
49 | L | A | 0.0000 | |
50 | R | A | -1.7431 | |
51 | N | A | -1.6891 | |
52 | A | A | 0.0000 | |
53 | V | A | -0.0936 | |
54 | Q | A | -1.1566 | |
55 | A | A | -0.5693 | |
56 | D | A | 0.0000 | |
57 | E | A | -2.6127 | |
58 | G | A | -2.6383 | |
59 | E | A | -3.6343 | |
60 | Y | A | 0.0000 | |
61 | E | A | -2.5579 | |
62 | V | A | 0.0000 | |
63 | I | A | -0.6656 | |
64 | V | A | 0.0000 | |
65 | D | A | -1.8697 | |
66 | G | A | -0.9327 | |
67 | L | A | -0.4054 | |
68 | T | A | -0.8197 | |
69 | N | A | -1.3907 | |
70 | R | A | -3.0461 | |
71 | N | A | -2.7426 | |
72 | E | A | -3.5301 | |
73 | G | A | 0.0000 | |
74 | K | A | -3.2590 | |
75 | V | A | -2.3379 | |
76 | K | A | -2.5202 | |
77 | D | A | -2.5079 | |
78 | G | A | -1.7426 | |
79 | V | A | -1.4514 | |
80 | I | A | 0.0000 | |
81 | E | A | -1.5034 | |
82 | L | A | 0.0000 | |
83 | T | A | -0.8874 | |
84 | L | A | 0.0000 | |
85 | S | A | -1.9653 | |
86 | K | A | -3.1256 | |
87 | E | A | -3.0904 | |
88 | V | A | 0.0000 | |
89 | L | A | 0.0000 | |
90 | E | A | -3.0044 | |
91 | S | A | -2.2635 | |
92 | I | A | 0.0000 | |
93 | L | A | -1.2229 | |
94 | K | A | -2.2995 | |
95 | N | A | -2.3982 | |
96 | P | A | -1.9027 | |
97 | E | A | -2.7672 | |
98 | T | A | 0.0000 | |
99 | T | A | -1.1911 | |
100 | I | A | 0.0000 | |
101 | E | A | -1.0582 | |
102 | I | A | 0.0000 | |
103 | R | A | -2.8442 | |
104 | Q | A | -3.0761 | |
105 | K | A | -3.1354 | mutated: LK105A |