Project name: 9b049edbaa9298c

Status: done

Started: 2025-02-21 07:17:50
Chain sequence(s) A: MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKRETRQHNAAMKEAAGAGTGLGLGTATHSTTGQVGHGTGTHQMSALPGHGTGQLTDRVVEGTAVTDPIGRNTGTGRTTAHNTHVGGGGATGYGTGGGYTG
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage No
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       runJob:   FoldX not utilized. Treating input pdb file as it was already optimized.    (00:00:01)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:02)
Show buried residues

Minimal score value
-5.3443
Maximal score value
1.3971
Average score
-1.4064
Total score value
-222.2144

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.3993
2 Q A -1.3744
3 S A -1.0896
4 M A -0.5783
5 K A -2.5413
6 E A -2.7809
7 T A -1.2668
8 A A -0.6757
9 S A -1.1050
10 N A -1.1267
11 I A 0.8281
12 A A 0.1039
13 A A -0.4955
14 S A -0.3102
15 A A -0.6046
16 K A -1.9544
17 S A -1.6883
18 G A -1.7945
19 M A -1.5799
20 D A -3.1237
21 K A -3.1116
22 T A -2.0037
23 K A -2.9341
24 A A -2.5367
25 T A -2.1180
26 L A -1.7481
27 E A -3.3966
28 E A -3.9459
29 K A -3.6620
30 A A -2.9089
31 E A -4.3846
32 K A -4.1959
33 M A -2.4151
34 K A -3.4480
35 T A -3.2740
36 R A -3.6576
37 D A -3.3643
38 P A -1.7515
39 V A -0.3784
40 Q A -2.1134
41 K A -2.6266
42 Q A -1.7979
43 M A -0.2276
44 A A -1.0750
45 T A -2.0801
46 Q A -2.0418
47 V A -0.8568
48 K A -2.6681
49 E A -3.0910
50 D A -3.2162
51 K A -3.0238
52 I A -1.4855
53 N A -2.9081
54 Q A -3.3383
55 A A -2.7796
56 E A -3.4150
57 M A -2.7751
58 Q A -3.9464
59 K A -5.0407
60 R A -5.3443
61 E A -5.1145
62 T A -4.4168
63 R A -5.0219
64 Q A -4.5140
65 H A -3.8501
66 N A -3.5959
67 A A -2.8521
68 A A -1.9867
69 M A -1.4647
70 K A -3.0458
71 E A -2.7372
72 A A -1.3051
73 A A -1.3650
74 G A -1.7428
75 A A -1.1550
76 G A -1.0308
77 T A -0.4632
78 G A 0.1040
79 L A 1.3366
80 G A 0.7645
81 L A 1.3971
82 G A 0.3178
83 T A -0.0917
84 A A -0.3727
85 T A -0.6669
86 H A -1.1406
87 S A -0.8263
88 T A -0.5360
89 T A -0.6360
90 G A -0.7974
91 Q A -0.6683
92 V A 0.6397
93 G A -0.4321
94 H A -1.1200
95 G A -1.2221
96 T A -0.8990
97 G A -1.1529
98 T A -1.0262
99 H A -1.5506
100 Q A -1.3042
101 M A 0.1547
102 S A 0.2600
103 A A 0.9309
104 L A 1.3112
105 P A 0.0669
106 G A -0.8716
107 H A -1.5673
108 G A -1.3822
109 T A -1.0102
110 G A -1.0139
111 Q A -0.9541
112 L A 0.1594
113 T A -0.7564
114 D A -1.8440
115 R A -1.4317
116 V A 0.7087
117 V A 0.9513
118 E A -0.9163
119 G A -0.5089
120 T A -0.0509
121 A A 0.3226
122 V A 1.1594
123 T A 0.1403
124 D A -0.8903
125 P A -0.3889
126 I A 0.5509
127 G A -1.0968
128 R A -2.3694
129 N A -2.3384
130 T A -1.5741
131 G A -1.5672
132 T A -1.1247
133 G A -1.7274
134 R A -2.1866
135 T A -1.2128
136 T A -1.0203
137 A A -1.0026
138 H A -1.7453
139 N A -1.7855
140 T A -1.0996
141 H A -0.6734
142 V A 0.7109
143 G A -0.2083
144 G A -0.8257
145 G A -0.8949
146 G A -0.9344
147 A A -0.2883
148 T A -0.1384
149 G A -0.0181
150 Y A 0.8346
151 G A -0.0990
152 T A -0.4652
153 G A -0.9378
154 G A -0.6569
155 G A -0.2814
156 Y A 0.8206
157 T A 0.1688
158 G A -0.2167
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