Chain sequence(s) |
A: MQSMKETASNIAASAKSGMDKTKATLEEKAEKMKTRDPVQKQMATQVKEDKINQAEMQKRETRQHNAAMKEAAGAGTGLGLGTATHSTTGQVGHGTGTHQMSALPGHGTGQLTDRVVEGTAVTDPIGRNTGTGRTTAHNTHVGGGGATGYGTGGGYTG
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.3993 | |
2 | Q | A | -1.3744 | |
3 | S | A | -1.0896 | |
4 | M | A | -0.5783 | |
5 | K | A | -2.5413 | |
6 | E | A | -2.7809 | |
7 | T | A | -1.2668 | |
8 | A | A | -0.6757 | |
9 | S | A | -1.1050 | |
10 | N | A | -1.1267 | |
11 | I | A | 0.8281 | |
12 | A | A | 0.1039 | |
13 | A | A | -0.4955 | |
14 | S | A | -0.3102 | |
15 | A | A | -0.6046 | |
16 | K | A | -1.9544 | |
17 | S | A | -1.6883 | |
18 | G | A | -1.7945 | |
19 | M | A | -1.5799 | |
20 | D | A | -3.1237 | |
21 | K | A | -3.1116 | |
22 | T | A | -2.0037 | |
23 | K | A | -2.9341 | |
24 | A | A | -2.5367 | |
25 | T | A | -2.1180 | |
26 | L | A | -1.7481 | |
27 | E | A | -3.3966 | |
28 | E | A | -3.9459 | |
29 | K | A | -3.6620 | |
30 | A | A | -2.9089 | |
31 | E | A | -4.3846 | |
32 | K | A | -4.1959 | |
33 | M | A | -2.4151 | |
34 | K | A | -3.4480 | |
35 | T | A | -3.2740 | |
36 | R | A | -3.6576 | |
37 | D | A | -3.3643 | |
38 | P | A | -1.7515 | |
39 | V | A | -0.3784 | |
40 | Q | A | -2.1134 | |
41 | K | A | -2.6266 | |
42 | Q | A | -1.7979 | |
43 | M | A | -0.2276 | |
44 | A | A | -1.0750 | |
45 | T | A | -2.0801 | |
46 | Q | A | -2.0418 | |
47 | V | A | -0.8568 | |
48 | K | A | -2.6681 | |
49 | E | A | -3.0910 | |
50 | D | A | -3.2162 | |
51 | K | A | -3.0238 | |
52 | I | A | -1.4855 | |
53 | N | A | -2.9081 | |
54 | Q | A | -3.3383 | |
55 | A | A | -2.7796 | |
56 | E | A | -3.4150 | |
57 | M | A | -2.7751 | |
58 | Q | A | -3.9464 | |
59 | K | A | -5.0407 | |
60 | R | A | -5.3443 | |
61 | E | A | -5.1145 | |
62 | T | A | -4.4168 | |
63 | R | A | -5.0219 | |
64 | Q | A | -4.5140 | |
65 | H | A | -3.8501 | |
66 | N | A | -3.5959 | |
67 | A | A | -2.8521 | |
68 | A | A | -1.9867 | |
69 | M | A | -1.4647 | |
70 | K | A | -3.0458 | |
71 | E | A | -2.7372 | |
72 | A | A | -1.3051 | |
73 | A | A | -1.3650 | |
74 | G | A | -1.7428 | |
75 | A | A | -1.1550 | |
76 | G | A | -1.0308 | |
77 | T | A | -0.4632 | |
78 | G | A | 0.1040 | |
79 | L | A | 1.3366 | |
80 | G | A | 0.7645 | |
81 | L | A | 1.3971 | |
82 | G | A | 0.3178 | |
83 | T | A | -0.0917 | |
84 | A | A | -0.3727 | |
85 | T | A | -0.6669 | |
86 | H | A | -1.1406 | |
87 | S | A | -0.8263 | |
88 | T | A | -0.5360 | |
89 | T | A | -0.6360 | |
90 | G | A | -0.7974 | |
91 | Q | A | -0.6683 | |
92 | V | A | 0.6397 | |
93 | G | A | -0.4321 | |
94 | H | A | -1.1200 | |
95 | G | A | -1.2221 | |
96 | T | A | -0.8990 | |
97 | G | A | -1.1529 | |
98 | T | A | -1.0262 | |
99 | H | A | -1.5506 | |
100 | Q | A | -1.3042 | |
101 | M | A | 0.1547 | |
102 | S | A | 0.2600 | |
103 | A | A | 0.9309 | |
104 | L | A | 1.3112 | |
105 | P | A | 0.0669 | |
106 | G | A | -0.8716 | |
107 | H | A | -1.5673 | |
108 | G | A | -1.3822 | |
109 | T | A | -1.0102 | |
110 | G | A | -1.0139 | |
111 | Q | A | -0.9541 | |
112 | L | A | 0.1594 | |
113 | T | A | -0.7564 | |
114 | D | A | -1.8440 | |
115 | R | A | -1.4317 | |
116 | V | A | 0.7087 | |
117 | V | A | 0.9513 | |
118 | E | A | -0.9163 | |
119 | G | A | -0.5089 | |
120 | T | A | -0.0509 | |
121 | A | A | 0.3226 | |
122 | V | A | 1.1594 | |
123 | T | A | 0.1403 | |
124 | D | A | -0.8903 | |
125 | P | A | -0.3889 | |
126 | I | A | 0.5509 | |
127 | G | A | -1.0968 | |
128 | R | A | -2.3694 | |
129 | N | A | -2.3384 | |
130 | T | A | -1.5741 | |
131 | G | A | -1.5672 | |
132 | T | A | -1.1247 | |
133 | G | A | -1.7274 | |
134 | R | A | -2.1866 | |
135 | T | A | -1.2128 | |
136 | T | A | -1.0203 | |
137 | A | A | -1.0026 | |
138 | H | A | -1.7453 | |
139 | N | A | -1.7855 | |
140 | T | A | -1.0996 | |
141 | H | A | -0.6734 | |
142 | V | A | 0.7109 | |
143 | G | A | -0.2083 | |
144 | G | A | -0.8257 | |
145 | G | A | -0.8949 | |
146 | G | A | -0.9344 | |
147 | A | A | -0.2883 | |
148 | T | A | -0.1384 | |
149 | G | A | -0.0181 | |
150 | Y | A | 0.8346 | |
151 | G | A | -0.0990 | |
152 | T | A | -0.4652 | |
153 | G | A | -0.9378 | |
154 | G | A | -0.6569 | |
155 | G | A | -0.2814 | |
156 | Y | A | 0.8206 | |
157 | T | A | 0.1688 | |
158 | G | A | -0.2167 |