| Chain sequence(s) |
A: QVQLQQSGAELVRPGSSVKISCKASGYAFSSYWMNWVKQRPGQGLEWIGQIWPGDGDTNYNGKFKGKATLTADESSSTAYMQLSSLASEDSAVYFCARRETTTVGRYYYAMDYWGQGTTVTVSSGGGGSGGGGSGGGGSDIQLTQSPASLAVSLGQRATISCKASQSVDYDGDSYLNWYQQIPGQPPKLLIYDASNLVSGIPPRFSGSGSGTDFTLNIHPVEKVDAATYHCQQSTEDPWTFGGGTKLEIKGGGGSGGGGSGGGGSDIKLQSGAELARPGASVKMSCKTSGYTFTRYTMHWVKQRPGQGLEWIGYINPSRGYTNYNQKFKDKATLTTDKSSSTAYMQLSSLTSEDSAVYYCARYYDDHYCLDYWGQGTTLTVSSGGGGSGGGGSGGGGSDIQLTQSPAIMSASPGEKVTMTCRASSSVSYMNWYQQKSGTSPKRWIYDTSKVASGVPYRFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSNPLTFGAGTKLELK
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| pH calculations | Yes |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] PDB-Info: The input structure is globular. Max score is recommended for pH analysis. (00:00:03)
[INFO] FoldX: Starting FoldX energy minimization (00:00:04)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:06:44)
[INFO] agg3D: Running pKa-ANI on
/STORAGE/DATA/lcbio/aggreskan/9d8bfd1da4f47cd/tmp/folded.pdb (00:06:44)
[INFO] Main: Simulation completed successfully. (00:10:21)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 1 | Q | A | -1.4985 | |
| 2 | V | A | -1.0177 | |
| 3 | Q | A | -1.8694 | |
| 4 | L | A | 0.0000 | |
| 5 | Q | A | -2.1856 | |
| 6 | Q | A | 0.0000 | |
| 7 | S | A | -1.1537 | |
| 8 | G | A | -0.9342 | |
| 9 | A | A | -0.1584 | |
| 10 | E | A | -0.4269 | |
| 11 | L | A | 0.7948 | |
| 12 | V | A | -0.2991 | |
| 13 | R | A | -1.8413 | |
| 14 | P | A | -1.5462 | |
| 15 | G | A | -1.1526 | |
| 16 | S | A | -0.9789 | |
| 17 | S | A | -1.0882 | |
| 18 | V | A | 0.0000 | |
| 19 | K | A | -1.9383 | |
| 20 | I | A | 0.0000 | |
| 21 | S | A | -0.9190 | |
| 22 | C | A | 0.0000 | |
| 23 | K | A | -1.7379 | |
| 24 | A | A | 0.0000 | |
| 25 | S | A | -1.2170 | |
| 26 | G | A | -1.0158 | |
| 27 | Y | A | -0.6474 | |
| 28 | A | A | -0.5893 | |
| 29 | F | A | 0.0000 | |
| 30 | S | A | -1.0132 | |
| 31 | S | A | -0.5866 | |
| 32 | Y | A | 0.0000 | |
| 33 | W | A | 0.0000 | |
| 34 | M | A | 0.0000 | |
| 35 | N | A | 0.0000 | |
| 36 | W | A | 0.0000 | |
| 37 | V | A | 0.0000 | |
| 38 | K | A | 0.0000 | |
| 39 | Q | A | -0.5236 | |
| 40 | R | A | -1.1428 | |
| 41 | P | A | -0.8540 | |
| 42 | G | A | -0.9937 | |
| 43 | Q | A | -1.3157 | |
| 44 | G | A | -0.9292 | |
| 45 | L | A | 0.0000 | |
| 46 | E | A | -0.8405 | |
| 47 | W | A | 0.0000 | |
| 48 | I | A | 0.0000 | |
| 49 | G | A | 0.0000 | |
| 50 | Q | A | 0.0000 | |
| 51 | I | A | 0.0000 | |
| 52 | W | A | 0.0000 | |
| 53 | P | A | 0.0000 | |
| 54 | G | A | -1.9501 | |
| 55 | D | A | -2.7945 | |
| 56 | G | A | -2.3242 | |
| 57 | D | A | -2.2900 | |
| 58 | T | A | -1.2584 | |
| 59 | N | A | -1.3177 | |
| 60 | Y | A | -1.2320 | |
| 61 | N | A | 0.0000 | |
| 62 | G | A | -2.2904 | |
| 63 | K | A | -2.6104 | |
| 64 | F | A | 0.0000 | |
| 65 | K | A | -2.6879 | |
| 66 | G | A | -1.7898 | |
| 67 | K | A | -1.5908 | |
| 68 | A | A | 0.0000 | |
| 69 | T | A | -0.8617 | |
| 70 | L | A | 0.0000 | |
| 71 | T | A | -0.6514 | |
| 72 | A | A | -1.3998 | |
| 73 | D | A | -1.9008 | |
| 74 | E | A | -2.6209 | |
| 75 | S | A | -1.3963 | |
| 76 | S | A | -1.2473 | |
| 77 | S | A | -1.3977 | |
| 78 | T | A | 0.0000 | |
| 79 | A | A | 0.0000 | |
| 80 | Y | A | -0.5209 | |
| 81 | M | A | 0.0000 | |
| 82 | Q | A | -1.3104 | |
| 83 | L | A | 0.0000 | |
| 84 | S | A | -0.8989 | |
| 85 | S | A | -0.8606 | |
| 86 | L | A | 0.0000 | |
| 87 | A | A | -1.1182 | |
| 88 | S | A | -1.4366 | |
| 89 | E | A | -1.8665 | |
| 90 | D | A | 0.0000 | |
| 91 | S | A | 0.0000 | |
| 92 | A | A | 0.0000 | |
| 93 | V | A | 0.1341 | |
| 94 | Y | A | 0.0000 | |
| 95 | F | A | 0.0000 | |
| 96 | C | A | 0.0000 | |
| 97 | A | A | 0.0000 | |
| 98 | R | A | 0.0000 | |
| 99 | R | A | 0.0000 | |
| 100 | E | A | -0.3797 | |
| 101 | T | A | -0.4459 | |
| 102 | T | A | -0.5074 | |
| 103 | T | A | -0.6172 | |
| 104 | V | A | 0.0000 | |
| 105 | G | A | -1.3188 | |
| 106 | R | A | -2.0080 | |
| 107 | Y | A | -0.9141 | |
| 108 | Y | A | 0.0000 | |
| 109 | Y | A | -0.0055 | |
| 110 | A | A | 0.0000 | |
| 111 | M | A | 0.0000 | |
| 112 | D | A | -0.2997 | |
| 113 | Y | A | -0.3405 | |
| 114 | W | A | 0.0000 | |
| 115 | G | A | 0.0000 | |
| 116 | Q | A | -1.7722 | |
| 117 | G | A | -0.9025 | |
| 118 | T | A | 0.0000 | |
| 119 | T | A | -0.0692 | |
| 120 | V | A | 0.0000 | |
| 121 | T | A | -0.2481 | |
| 122 | V | A | 0.0000 | |
| 123 | S | A | -0.8532 | |
| 124 | S | A | -0.6046 | |
| 125 | G | A | -0.6276 | |
| 126 | G | A | -0.7009 | |
| 127 | G | A | -1.3547 | |
| 128 | G | A | -1.3482 | |
| 129 | S | A | -1.5459 | |
| 130 | G | A | -1.5854 | |
| 131 | G | A | -1.4754 | |
| 132 | G | A | -1.3579 | |
| 133 | G | A | -1.3661 | |
| 134 | S | A | -1.2978 | |
| 135 | G | A | -1.5257 | |
| 136 | G | A | -1.2836 | |
| 137 | G | A | -1.1786 | |
| 138 | G | A | -1.2219 | |
| 139 | S | A | -1.4348 | |
| 140 | D | A | -1.8605 | |
| 141 | I | A | 0.0000 | |
| 142 | Q | A | -1.3002 | |
| 143 | L | A | 0.0000 | |
| 144 | T | A | -0.9440 | |
| 145 | Q | A | 0.0000 | |
| 146 | S | A | -0.5940 | |
| 147 | P | A | -0.4389 | |
| 148 | A | A | -0.5161 | |
| 149 | S | A | -0.8815 | |
| 150 | L | A | -0.7393 | |
| 151 | A | A | -1.0880 | |
| 152 | V | A | 0.0000 | |
| 153 | S | A | -1.4365 | |
| 154 | L | A | -0.9547 | |
| 155 | G | A | -1.2909 | |
| 156 | Q | A | -2.0752 | |
| 157 | R | A | -2.7832 | |
| 158 | A | A | 0.0000 | |
| 159 | T | A | -0.8294 | |
| 160 | I | A | 0.0000 | |
| 161 | S | A | -0.8396 | |
| 162 | C | A | 0.0000 | |
| 163 | K | A | -2.2467 | |
| 164 | A | A | 0.0000 | |
| 165 | S | A | -1.5119 | |
| 166 | Q | A | -2.0239 | |
| 167 | S | A | -1.3935 | |
| 168 | V | A | 0.0000 | |
| 169 | D | A | -1.2312 | |
| 170 | Y | A | -0.0632 | |
| 171 | D | A | -1.0409 | |
| 172 | G | A | -1.0924 | |
| 173 | D | A | -1.4302 | |
| 174 | S | A | 0.0000 | |
| 175 | Y | A | -0.4808 | |
| 176 | L | A | 0.0000 | |
| 177 | N | A | 0.0000 | |
| 178 | W | A | 0.0000 | |
| 179 | Y | A | 0.0000 | |
| 180 | Q | A | 0.0000 | |
| 181 | Q | A | 0.0000 | |
| 182 | I | A | 0.0000 | |
| 183 | P | A | -0.7703 | |
| 184 | G | A | -1.0609 | |
| 185 | Q | A | -1.2836 | |
| 186 | P | A | 0.0000 | |
| 187 | P | A | 0.0000 | |
| 188 | K | A | -0.5885 | |
| 189 | L | A | 0.0000 | |
| 190 | L | A | 0.0000 | |
| 191 | I | A | 0.0000 | |
| 192 | Y | A | 0.0875 | |
| 193 | D | A | -0.5840 | |
| 194 | A | A | 0.0000 | |
| 195 | S | A | -0.6070 | |
| 196 | N | A | -0.3890 | |
| 197 | L | A | 0.2090 | |
| 198 | V | A | 0.2307 | |
| 199 | S | A | -0.1901 | |
| 200 | G | A | -0.3538 | |
| 201 | I | A | -0.0231 | |
| 202 | P | A | -0.2652 | |
| 203 | P | A | -0.5147 | |
| 204 | R | A | -1.1025 | |
| 205 | F | A | 0.0000 | |
| 206 | S | A | -0.5958 | |
| 207 | G | A | -0.4801 | |
| 208 | S | A | -0.9388 | |
| 209 | G | A | -1.2594 | |
| 210 | S | A | -1.5344 | |
| 211 | G | A | -1.4393 | |
| 212 | T | A | -2.0014 | |
| 213 | D | A | -2.6305 | |
| 214 | F | A | 0.0000 | |
| 215 | T | A | -0.8939 | |
| 216 | L | A | 0.0000 | |
| 217 | N | A | -1.0725 | |
| 218 | I | A | 0.0000 | |
| 219 | H | A | -2.1485 | |
| 220 | P | A | -1.7550 | |
| 221 | V | A | 0.0000 | |
| 222 | E | A | -1.2512 | |
| 223 | K | A | -1.6179 | |
| 224 | V | A | -0.1012 | |
| 225 | D | A | 0.0000 | |
| 226 | A | A | -1.2574 | |
| 227 | A | A | 0.0000 | |
| 228 | T | A | -0.8931 | |
| 229 | Y | A | 0.0000 | |
| 230 | H | A | 0.0000 | |
| 231 | C | A | 0.0000 | |
| 232 | Q | A | 0.0000 | |
| 233 | Q | A | 0.0000 | |
| 234 | S | A | 0.0000 | |
| 235 | T | A | -1.1338 | |
| 236 | E | A | -2.4661 | |
| 237 | D | A | -2.7783 | |
| 238 | P | A | -2.0677 | |
| 239 | W | A | 0.0000 | |
| 240 | T | A | -0.8547 | |
| 241 | F | A | 0.0000 | |
| 242 | G | A | 0.0000 | |
| 243 | G | A | -0.9644 | |
| 244 | G | A | -0.7305 | |
| 245 | T | A | 0.0000 | |
| 246 | K | A | -1.6645 | |
| 247 | L | A | 0.0000 | |
| 248 | E | A | -2.3792 | |
| 249 | I | A | 0.0000 | |
| 250 | K | A | -2.3345 | |
| 251 | G | A | -1.6598 | |
| 252 | G | A | -1.6199 | |
| 253 | G | A | -1.4474 | |
| 254 | G | A | -1.1111 | |
| 255 | S | A | -0.8690 | |
| 256 | G | A | -0.6600 | |
| 257 | G | A | -0.8521 | |
| 258 | G | A | -0.8752 | |
| 259 | G | A | -0.8354 | |
| 260 | S | A | -0.7787 | |
| 261 | G | A | -1.1149 | |
| 262 | G | A | -1.2624 | |
| 263 | G | A | -1.1097 | |
| 264 | G | A | -0.8703 | |
| 265 | S | A | -0.4247 | |
| 266 | D | A | 0.0699 | |
| 267 | I | A | 1.2470 | |
| 268 | K | A | 0.0000 | |
| 269 | L | A | 1.1388 | |
| 270 | Q | A | 0.0000 | |
| 271 | S | A | -0.5993 | |
| 272 | G | A | -0.6951 | |
| 273 | A | A | -0.3483 | |
| 274 | E | A | -0.6061 | |
| 275 | L | A | 0.3401 | |
| 276 | A | A | -0.7251 | |
| 277 | R | A | -1.9978 | |
| 278 | P | A | -1.3830 | |
| 279 | G | A | -1.1883 | |
| 280 | A | A | -0.9932 | |
| 281 | S | A | -1.1502 | |
| 282 | V | A | 0.0000 | |
| 283 | K | A | -2.0920 | |
| 284 | M | A | 0.0000 | |
| 285 | S | A | -0.4898 | |
| 286 | C | A | 0.0000 | |
| 287 | K | A | -0.3600 | |
| 288 | T | A | 0.0000 | |
| 289 | S | A | -0.1325 | |
| 290 | G | A | -0.5571 | |
| 291 | Y | A | 0.0000 | |
| 292 | T | A | -1.0314 | |
| 293 | F | A | 0.0000 | |
| 294 | T | A | -0.8968 | |
| 295 | R | A | -0.4027 | |
| 296 | Y | A | 0.0117 | |
| 297 | T | A | 0.0000 | |
| 298 | M | A | 0.0000 | |
| 299 | H | A | 0.0000 | |
| 300 | W | A | 0.0000 | |
| 301 | V | A | 0.0000 | |
| 302 | K | A | 0.0000 | |
| 303 | Q | A | -0.6551 | |
| 304 | R | A | -1.2190 | |
| 305 | P | A | -1.1383 | |
| 306 | G | A | -1.2818 | |
| 307 | Q | A | -1.6504 | |
| 308 | G | A | -0.8793 | |
| 309 | L | A | 0.0000 | |
| 310 | E | A | -0.7611 | |
| 311 | W | A | 0.0000 | |
| 312 | I | A | 0.0000 | |
| 313 | G | A | 0.0000 | |
| 314 | Y | A | 0.0000 | |
| 315 | I | A | 0.0000 | |
| 316 | N | A | 0.0000 | |
| 317 | P | A | 0.0000 | |
| 318 | S | A | 0.0000 | |
| 319 | R | A | -1.9861 | |
| 320 | G | A | -1.2680 | |
| 321 | Y | A | -0.3154 | |
| 322 | T | A | -0.2361 | |
| 323 | N | A | -0.7435 | |
| 324 | Y | A | -1.4014 | |
| 325 | N | A | -1.9927 | |
| 326 | Q | A | -2.7500 | |
| 327 | K | A | -2.7973 | |
| 328 | F | A | 0.0000 | |
| 329 | K | A | -3.0234 | |
| 330 | D | A | -2.9815 | |
| 331 | K | A | -2.0410 | |
| 332 | A | A | 0.0000 | |
| 333 | T | A | -1.0288 | |
| 334 | L | A | 0.0000 | |
| 335 | T | A | -0.5894 | |
| 336 | T | A | -1.1640 | |
| 337 | D | A | -1.8052 | |
| 338 | K | A | -2.4562 | |
| 339 | S | A | -1.3274 | |
| 340 | S | A | -1.1836 | |
| 341 | S | A | -1.3699 | |
| 342 | T | A | 0.0000 | |
| 343 | A | A | 0.0000 | |
| 344 | Y | A | -0.5690 | |
| 345 | M | A | 0.0000 | |
| 346 | Q | A | -1.3969 | |
| 347 | L | A | 0.0000 | |
| 348 | S | A | -1.1507 | |
| 349 | S | A | -1.0304 | |
| 350 | L | A | 0.0000 | |
| 351 | T | A | -0.9463 | |
| 352 | S | A | -1.1330 | |
| 353 | E | A | -1.2439 | |
| 354 | D | A | 0.0000 | |
| 355 | S | A | 0.0000 | |
| 356 | A | A | 0.0000 | |
| 357 | V | A | -0.0264 | |
| 358 | Y | A | 0.0000 | |
| 359 | Y | A | 0.0000 | |
| 360 | C | A | 0.0000 | |
| 361 | A | A | 0.0000 | |
| 362 | R | A | 0.0000 | |
| 363 | Y | A | 0.0000 | |
| 364 | Y | A | -0.2546 | |
| 365 | D | A | -1.2012 | |
| 366 | D | A | -2.1623 | |
| 367 | H | A | -1.3616 | |
| 368 | Y | A | -0.9724 | |
| 369 | C | A | 0.0000 | |
| 370 | L | A | 0.0000 | |
| 371 | D | A | 0.0000 | |
| 372 | Y | A | 0.3845 | |
| 373 | W | A | 0.1175 | |
| 374 | G | A | 0.0000 | |
| 375 | Q | A | -0.7337 | |
| 376 | G | A | -0.4364 | |
| 377 | T | A | 0.0000 | |
| 378 | T | A | -0.1855 | |
| 379 | L | A | 0.0000 | |
| 380 | T | A | -0.4396 | |
| 381 | V | A | 0.0000 | |
| 382 | S | A | -1.0945 | |
| 383 | S | A | -1.1980 | |
| 384 | G | A | -1.1057 | |
| 385 | G | A | -1.0374 | |
| 386 | G | A | -0.9414 | |
| 387 | G | A | -0.8654 | |
| 388 | S | A | -1.0633 | |
| 389 | G | A | -1.3371 | |
| 390 | G | A | -1.3293 | |
| 391 | G | A | -1.4788 | |
| 392 | G | A | -1.1932 | |
| 393 | S | A | -1.0882 | |
| 394 | G | A | -1.3727 | |
| 395 | G | A | -1.8932 | |
| 396 | G | A | -1.4438 | |
| 397 | G | A | -1.3552 | |
| 398 | S | A | -1.1672 | |
| 399 | D | A | -1.5314 | |
| 400 | I | A | 0.0000 | |
| 401 | Q | A | -1.8224 | |
| 402 | L | A | 0.0000 | |
| 403 | T | A | -0.9672 | |
| 404 | Q | A | 0.0000 | |
| 405 | S | A | -0.1448 | |
| 406 | P | A | 0.3872 | |
| 407 | A | A | 0.7264 | |
| 408 | I | A | 1.3854 | |
| 409 | M | A | 0.3320 | |
| 410 | S | A | -0.7765 | |
| 411 | A | A | 0.0000 | |
| 412 | S | A | -1.7472 | |
| 413 | P | A | -1.8885 | |
| 414 | G | A | -1.9563 | |
| 415 | E | A | -2.6820 | |
| 416 | K | A | -2.7551 | |
| 417 | V | A | 0.0000 | |
| 418 | T | A | -0.6110 | |
| 419 | M | A | 0.0000 | |
| 420 | T | A | -0.5903 | |
| 421 | C | A | 0.0000 | |
| 422 | R | A | -2.1417 | |
| 423 | A | A | 0.0000 | |
| 424 | S | A | -1.2146 | |
| 425 | S | A | -0.9157 | |
| 426 | S | A | -0.7321 | |
| 427 | V | A | 0.0000 | |
| 428 | S | A | -0.8586 | |
| 429 | Y | A | 0.0000 | |
| 430 | M | A | 0.0000 | |
| 431 | N | A | 0.0000 | |
| 432 | W | A | 0.0000 | |
| 433 | Y | A | 0.0000 | |
| 434 | Q | A | 0.0000 | |
| 435 | Q | A | 0.0000 | |
| 436 | K | A | -1.5410 | |
| 437 | S | A | -0.8623 | |
| 438 | G | A | -0.9592 | |
| 439 | T | A | -1.0849 | |
| 440 | S | A | -0.9881 | |
| 441 | P | A | 0.0000 | |
| 442 | K | A | -1.4907 | |
| 443 | R | A | -0.6577 | |
| 444 | W | A | -0.5773 | |
| 445 | I | A | 0.0000 | |
| 446 | Y | A | 0.0000 | |
| 447 | D | A | -1.5050 | |
| 448 | T | A | -0.9961 | |
| 449 | S | A | -1.1947 | |
| 450 | K | A | -1.6694 | |
| 451 | V | A | -0.2455 | |
| 452 | A | A | 0.0000 | |
| 453 | S | A | -0.4926 | |
| 454 | G | A | -0.3011 | |
| 455 | V | A | 0.0000 | |
| 456 | P | A | 0.4412 | |
| 457 | Y | A | 1.1349 | |
| 458 | R | A | -0.0485 | |
| 459 | F | A | 0.0000 | |
| 460 | S | A | -0.2648 | |
| 461 | G | A | 0.0000 | |
| 462 | S | A | -0.8408 | |
| 463 | G | A | -0.8629 | |
| 464 | S | A | -0.8055 | |
| 465 | G | A | -0.7906 | |
| 466 | T | A | -1.0353 | |
| 467 | S | A | -1.1288 | |
| 468 | Y | A | 0.0000 | |
| 469 | S | A | -0.5712 | |
| 470 | L | A | 0.0000 | |
| 471 | T | A | -0.5904 | |
| 472 | I | A | 0.0000 | |
| 473 | S | A | -1.3742 | |
| 474 | S | A | -1.7629 | |
| 475 | M | A | 0.0000 | |
| 476 | E | A | -2.1904 | |
| 477 | A | A | -1.7320 | |
| 478 | E | A | -2.2937 | |
| 479 | D | A | 0.0000 | |
| 480 | A | A | -1.5277 | |
| 481 | A | A | -1.1110 | |
| 482 | T | A | -0.5607 | |
| 483 | Y | A | 0.0000 | |
| 484 | Y | A | 0.0000 | |
| 485 | C | A | 0.0000 | |
| 486 | Q | A | 0.0000 | |
| 487 | Q | A | 0.0000 | |
| 488 | W | A | 0.0000 | |
| 489 | S | A | -0.7949 | |
| 490 | S | A | -0.9541 | |
| 491 | N | A | -1.5315 | |
| 492 | P | A | -1.4255 | |
| 493 | L | A | 0.0000 | |
| 494 | T | A | -0.6269 | |
| 495 | F | A | -0.1074 | |
| 496 | G | A | 0.0000 | |
| 497 | A | A | -0.4042 | |
| 498 | G | A | 0.0000 | |
| 499 | T | A | 0.0000 | |
| 500 | K | A | -0.5659 | |
| 501 | L | A | 0.0000 | |
| 502 | E | A | -1.4897 | |
| 503 | L | A | -1.3034 | |
| 504 | K | A | -1.7763 |
Calculations for various pH values
This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.
pH |
Average A4D Score |
Max A4D Score |
|||
| 4.0 | -0.6145 | 2.4134 | View | CSV | PDB |
| 4.5 | -0.6481 | 2.3843 | View | CSV | PDB |
| 5.0 | -0.6882 | 2.3396 | View | CSV | PDB |
| 5.5 | -0.7265 | 2.29 | View | CSV | PDB |
| 6.0 | -0.7541 | 2.253 | View | CSV | PDB |
| 6.5 | -0.7647 | 2.2509 | View | CSV | PDB |
| 7.0 | -0.7587 | 2.2975 | View | CSV | PDB |
| 7.5 | -0.7416 | 2.3839 | View | CSV | PDB |
| 8.0 | -0.7184 | 2.4908 | View | CSV | PDB |
| 8.5 | -0.6904 | 2.6055 | View | CSV | PDB |
| 9.0 | -0.6576 | 2.7225 | View | CSV | PDB |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine