Chain sequence(s) |
A: MANNEEHPPRGNEWEVVSLTSSAYAAAPGPYNVESRDVRKYDAYYGAETSRDLYMSEHFVFPPSEHENLPIDESLFVAEQRKDGRDLMLEGQGLSDQFHYEAGNNQQSIYGESALGSSRHMESFGSESAVYEHGLVDAEGNLDLHSDGEGEKDVKKSTHNLPCEAWWKRRAISMYSRTREANAIWSLFFAAAVTGLVVLGQRWQQERWQVLQLKWQSSISSEKLGRVLEPLSRLKDVIVRSNPQASLVRSGSSSEV
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.6605 | |
2 | A | A | -0.6144 | |
3 | N | A | -2.2744 | |
4 | N | A | -3.2252 | |
5 | E | A | -3.9081 | |
6 | E | A | -3.7396 | |
7 | H | A | -2.9224 | |
8 | P | A | -1.9884 | |
9 | P | A | -2.0000 | |
10 | R | A | -2.9841 | |
11 | G | A | -2.3789 | |
12 | N | A | -2.7422 | |
13 | E | A | -2.6338 | |
14 | W | A | -0.2864 | |
15 | E | A | -0.6797 | |
16 | V | A | 1.9423 | |
17 | V | A | 2.4703 | |
18 | S | A | 1.5261 | |
19 | L | A | 2.0253 | |
20 | T | A | 0.9067 | |
21 | S | A | 0.7681 | |
22 | S | A | 0.7191 | |
23 | A | A | 0.7773 | |
24 | Y | A | 1.2631 | |
25 | A | A | 0.5754 | |
26 | A | A | 0.3604 | |
27 | A | A | 0.1786 | |
28 | P | A | -0.1649 | |
29 | G | A | -0.5315 | |
30 | P | A | -0.0134 | |
31 | Y | A | 0.7157 | |
32 | N | A | -0.4668 | |
33 | V | A | 0.3467 | |
34 | E | A | -1.8555 | |
35 | S | A | -1.9601 | |
36 | R | A | -2.9272 | |
37 | D | A | -2.5953 | |
38 | V | A | -0.8203 | |
39 | R | A | -2.1203 | |
40 | K | A | -1.9514 | |
41 | Y | A | -0.8157 | |
42 | D | A | -1.0151 | |
43 | A | A | 0.2619 | |
44 | Y | A | 1.4777 | |
45 | Y | A | 1.3348 | |
46 | G | A | 0.0652 | |
47 | A | A | -0.5910 | |
48 | E | A | -2.1560 | |
49 | T | A | -1.9701 | |
50 | S | A | -1.9093 | |
51 | R | A | -2.4664 | |
52 | D | A | -1.4128 | |
53 | L | A | 0.9877 | |
54 | Y | A | 1.3675 | |
55 | M | A | 1.2757 | |
56 | S | A | 0.0785 | |
57 | E | A | -0.9631 | |
58 | H | A | -0.0687 | |
59 | F | A | 2.4227 | |
60 | V | A | 2.8954 | |
61 | F | A | 3.0249 | |
62 | P | A | 0.9536 | |
63 | P | A | -0.3555 | |
64 | S | A | -1.5728 | |
65 | E | A | -3.2703 | |
66 | H | A | -2.9312 | |
67 | E | A | -3.1985 | |
68 | N | A | -1.6415 | |
69 | L | A | 0.5370 | |
70 | P | A | 0.0568 | |
71 | I | A | 0.6622 | |
72 | D | A | -1.0948 | |
73 | E | A | -0.9152 | |
74 | S | A | 0.3727 | |
75 | L | A | 1.8058 | |
76 | F | A | 2.4752 | |
77 | V | A | 2.0700 | |
78 | A | A | 0.2621 | |
79 | E | A | -2.0220 | |
80 | Q | A | -3.2287 | |
81 | R | A | -4.2623 | |
82 | K | A | -4.3892 | |
83 | D | A | -3.9526 | |
84 | G | A | -3.1602 | |
85 | R | A | -3.1029 | |
86 | D | A | -1.5521 | |
87 | L | A | 0.8249 | |
88 | M | A | 1.3317 | |
89 | L | A | 1.0695 | |
90 | E | A | -1.1185 | |
91 | G | A | -1.2950 | |
92 | Q | A | -1.6170 | |
93 | G | A | -0.8360 | |
94 | L | A | 0.3458 | |
95 | S | A | -0.8322 | |
96 | D | A | -1.8745 | |
97 | Q | A | -1.1151 | |
98 | F | A | 0.6077 | |
99 | H | A | -0.4173 | |
100 | Y | A | 0.2587 | |
101 | E | A | -1.4538 | |
102 | A | A | -1.1164 | |
103 | G | A | -1.8368 | |
104 | N | A | -2.5690 | |
105 | N | A | -2.8980 | |
106 | Q | A | -2.8362 | |
107 | Q | A | -1.7341 | |
108 | S | A | 0.0687 | |
109 | I | A | 2.1798 | |
110 | Y | A | 1.5890 | |
111 | G | A | -0.3380 | |
112 | E | A | -1.8226 | |
113 | S | A | -0.8504 | |
114 | A | A | 0.1921 | |
115 | L | A | 1.2170 | |
116 | G | A | 0.2544 | |
117 | S | A | -0.7152 | |
118 | S | A | -1.5288 | |
119 | R | A | -2.2374 | |
120 | H | A | -1.8435 | |
121 | M | A | -0.7831 | |
122 | E | A | -1.1945 | |
123 | S | A | -0.0205 | |
124 | F | A | 1.1732 | |
125 | G | A | -0.1063 | |
126 | S | A | -0.9852 | |
127 | E | A | -2.1258 | |
128 | S | A | -0.7330 | |
129 | A | A | 0.5105 | |
130 | V | A | 1.9949 | |
131 | Y | A | 0.8981 | |
132 | E | A | -1.3052 | |
133 | H | A | -1.5073 | |
134 | G | A | -0.2360 | |
135 | L | A | 1.5904 | |
136 | V | A | 1.4703 | |
137 | D | A | -0.9945 | |
138 | A | A | -1.5836 | |
139 | E | A | -2.5905 | |
140 | G | A | -1.9360 | |
141 | N | A | -1.4890 | |
142 | L | A | 0.0313 | |
143 | D | A | -0.9083 | |
144 | L | A | 0.1734 | |
145 | H | A | -1.0834 | |
146 | S | A | -1.7283 | |
147 | D | A | -2.6165 | |
148 | G | A | -2.6939 | |
149 | E | A | -3.1154 | |
150 | G | A | -2.9428 | |
151 | E | A | -3.5522 | |
152 | K | A | -3.3419 | |
153 | D | A | -2.8483 | |
154 | V | A | -0.9510 | |
155 | K | A | -2.4545 | |
156 | K | A | -2.6388 | |
157 | S | A | -1.8037 | |
158 | T | A | -1.5015 | |
159 | H | A | -1.5731 | |
160 | N | A | -1.2379 | |
161 | L | A | 0.3215 | |
162 | P | A | 0.0426 | |
163 | C | A | 0.2629 | |
164 | E | A | -1.1263 | |
165 | A | A | -0.2576 | |
166 | W | A | 0.1563 | |
167 | W | A | 0.0948 | |
168 | K | A | -1.2925 | |
169 | R | A | -2.0250 | |
170 | R | A | -1.4060 | |
171 | A | A | 0.2774 | |
172 | I | A | 1.4047 | |
173 | S | A | 0.2937 | |
174 | M | A | 1.0327 | |
175 | Y | A | 1.4372 | |
176 | S | A | -0.3208 | |
177 | R | A | -2.2276 | |
178 | T | A | -1.9717 | |
179 | R | A | -3.3531 | |
180 | E | A | -2.4621 | |
181 | A | A | -0.9830 | |
182 | N | A | -0.7051 | |
183 | A | A | 0.9319 | |
184 | I | A | 3.1757 | |
185 | W | A | 3.2055 | |
186 | S | A | 2.7278 | |
187 | L | A | 4.0990 | |
188 | F | A | 4.6619 | |
189 | F | A | 4.3675 | |
190 | A | A | 3.1784 | |
191 | A | A | 2.7135 | |
192 | A | A | 3.0709 | |
193 | V | A | 4.0759 | |
194 | T | A | 2.9342 | |
195 | G | A | 2.5931 | |
196 | L | A | 3.5030 | |
197 | V | A | 3.6166 | |
198 | V | A | 3.0161 | |
199 | L | A | 2.5042 | |
200 | G | A | 0.7682 | |
201 | Q | A | -1.0283 | |
202 | R | A | -1.6285 | |
203 | W | A | -0.9171 | |
204 | Q | A | -2.1440 | |
205 | Q | A | -2.7151 | |
206 | E | A | -2.6077 | |
207 | R | A | -1.8545 | |
208 | W | A | -0.6150 | |
209 | Q | A | -0.8535 | |
210 | V | A | 0.5777 | |
211 | L | A | 0.2980 | |
212 | Q | A | -0.4767 | |
213 | L | A | 0.5555 | |
214 | K | A | -0.4985 | |
215 | W | A | 0.4429 | |
216 | Q | A | -0.4121 | |
217 | S | A | -0.5817 | |
218 | S | A | 0.0621 | |
219 | I | A | 0.9612 | |
220 | S | A | -0.5164 | |
221 | S | A | -1.2024 | |
222 | E | A | -2.5034 | |
223 | K | A | -1.9278 | |
224 | L | A | 0.3596 | |
225 | G | A | -0.7252 | |
226 | R | A | -1.5431 | |
227 | V | A | 1.0787 | |
228 | L | A | 1.0691 | |
229 | E | A | -1.2770 | |
230 | P | A | -0.2286 | |
231 | L | A | 0.9583 | |
232 | S | A | -0.8208 | |
233 | R | A | -1.4517 | |
234 | L | A | 0.8513 | |
235 | K | A | -0.7886 | |
236 | D | A | -1.0076 | |
237 | V | A | 1.6360 | |
238 | I | A | 2.3338 | |
239 | V | A | 1.5937 | |
240 | R | A | -0.9093 | |
241 | S | A | -0.8921 | |
242 | N | A | -2.1951 | |
243 | P | A | -1.7659 | |
244 | Q | A | -1.5652 | |
245 | A | A | -0.2401 | |
246 | S | A | 0.5437 | |
247 | L | A | 1.6469 | |
248 | V | A | 1.4548 | |
249 | R | A | -0.8336 | |
250 | S | A | -0.7435 | |
251 | G | A | -1.0509 | |
252 | S | A | -1.0514 | |
253 | S | A | -1.0035 | |
254 | S | A | -0.9119 | |
255 | E | A | -1.1375 | |
256 | V | A | 0.8424 |