Chain sequence(s) |
A: MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKDKTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTSGILGQTGEQVKQMAMGATDAVKHTLGLRTDEGNKEHVSSAPSTTTTTTTRETQRK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.7054 | |
2 | A | A | -0.3521 | |
3 | S | A | -1.3356 | |
4 | H | A | -2.2743 | |
5 | Q | A | -2.6459 | |
6 | E | A | -3.2821 | |
7 | Q | A | -2.8665 | |
8 | S | A | -1.8003 | |
9 | Y | A | -1.1272 | |
10 | K | A | -2.6182 | |
11 | A | A | -2.0187 | |
12 | G | A | -2.3457 | |
13 | E | A | -3.3991 | |
14 | T | A | -3.0943 | |
15 | R | A | -4.0044 | |
16 | G | A | -3.9337 | |
17 | K | A | -4.3195 | |
18 | A | A | -3.4739 | |
19 | Q | A | -4.0796 | |
20 | E | A | -4.7122 | |
21 | K | A | -4.0311 | |
22 | T | A | -2.6432 | |
23 | G | A | -2.5808 | |
24 | E | A | -2.8719 | |
25 | A | A | -1.0993 | |
26 | M | A | -0.1236 | |
27 | G | A | -1.1691 | |
28 | T | A | -1.0796 | |
29 | M | A | -0.4197 | |
30 | G | A | -1.4422 | |
31 | D | A | -3.0392 | |
32 | K | A | -3.0232 | |
33 | T | A | -2.5414 | |
34 | Q | A | -3.6013 | |
35 | A | A | -3.3100 | |
36 | A | A | -3.1019 | |
37 | K | A | -4.4908 | |
38 | D | A | -4.6583 | |
39 | K | A | -4.2516 | |
40 | T | A | -3.4757 | |
41 | Q | A | -4.0917 | |
42 | E | A | -4.2991 | |
43 | T | A | -2.7321 | |
44 | A | A | -2.5534 | |
45 | Q | A | -3.2410 | |
46 | S | A | -2.7058 | |
47 | A | A | -2.4360 | |
48 | Q | A | -3.4651 | |
49 | Q | A | -3.8082 | |
50 | K | A | -3.8903 | |
51 | A | A | -2.9245 | |
52 | H | A | -3.5157 | |
53 | E | A | -4.0248 | |
54 | T | A | -2.6613 | |
55 | A | A | -2.5386 | |
56 | Q | A | -3.6641 | |
57 | S | A | -2.9466 | |
58 | A | A | -2.6615 | |
59 | K | A | -3.8686 | |
60 | D | A | -3.9849 | |
61 | K | A | -3.7418 | |
62 | T | A | -2.6805 | |
63 | S | A | -2.6470 | |
64 | Q | A | -3.0488 | |
65 | A | A | -1.9843 | |
66 | A | A | -2.1629 | |
67 | Q | A | -3.0652 | |
68 | T | A | -2.6134 | |
69 | T | A | -2.7700 | |
70 | Q | A | -3.8278 | |
71 | E | A | -4.7660 | |
72 | R | A | -4.7343 | |
73 | A | A | -3.9150 | |
74 | Q | A | -4.9897 | |
75 | E | A | -5.3103 | |
76 | S | A | -4.1594 | |
77 | K | A | -4.4640 | |
78 | D | A | -4.7188 | |
79 | K | A | -3.7534 | |
80 | T | A | -2.0895 | |
81 | G | A | -1.9847 | |
82 | S | A | -0.3195 | |
83 | Y | A | 0.7304 | |
84 | M | A | 0.0468 | |
85 | S | A | -1.1043 | |
86 | E | A | -1.8679 | |
87 | T | A | -1.0388 | |
88 | G | A | -1.7838 | |
89 | E | A | -2.8884 | |
90 | A | A | -1.8147 | |
91 | I | A | -1.0160 | |
92 | K | A | -3.2630 | |
93 | N | A | -3.6125 | |
94 | K | A | -3.4392 | |
95 | A | A | -2.4103 | |
96 | H | A | -3.0964 | |
97 | D | A | -3.6424 | |
98 | A | A | -2.2954 | |
99 | A | A | -2.1492 | |
100 | E | A | -2.7736 | |
101 | Y | A | -1.3200 | |
102 | T | A | -1.8609 | |
103 | K | A | -3.3184 | |
104 | E | A | -3.6025 | |
105 | T | A | -2.5821 | |
106 | A | A | -2.9716 | |
107 | E | A | -4.1757 | |
108 | A | A | -3.4555 | |
109 | G | A | -3.0176 | |
110 | K | A | -3.9506 | |
111 | E | A | -3.8809 | |
112 | K | A | -2.8341 | |
113 | T | A | -1.4266 | |
114 | S | A | -1.2569 | |
115 | G | A | -0.6413 | |
116 | I | A | 1.0413 | |
117 | L | A | 0.9563 | |
118 | G | A | -0.5283 | |
119 | Q | A | -1.2377 | |
120 | T | A | -0.6380 | |
121 | G | A | -0.9253 | |
122 | E | A | -2.6008 | |
123 | Q | A | -1.9864 | |
124 | V | A | -0.1201 | |
125 | K | A | -2.0875 | |
126 | Q | A | -1.6563 | |
127 | M | A | -0.0231 | |
128 | A | A | -0.2115 | |
129 | M | A | -0.2330 | |
130 | G | A | -0.4871 | |
131 | A | A | -0.2566 | |
132 | T | A | -0.5455 | |
133 | D | A | -1.6175 | |
134 | A | A | -0.5498 | |
135 | V | A | 0.6919 | |
136 | K | A | -1.2213 | |
137 | H | A | -1.3477 | |
138 | T | A | 0.1470 | |
139 | L | A | 0.9382 | |
140 | G | A | -0.0168 | |
141 | L | A | 0.2276 | |
142 | R | A | -2.1911 | |
143 | T | A | -2.1856 | |
144 | D | A | -3.2871 | |
145 | E | A | -3.6531 | |
146 | G | A | -2.8065 | |
147 | N | A | -3.4071 | |
148 | K | A | -3.6668 | |
149 | E | A | -3.1088 | |
150 | H | A | -1.5616 | |
151 | V | A | 0.5005 | |
152 | S | A | 0.2369 | |
153 | S | A | 0.0225 | |
154 | A | A | -0.2606 | |
155 | P | A | -0.3924 | |
156 | S | A | -0.3858 | |
157 | T | A | -0.3034 | |
158 | T | A | -0.2128 | |
159 | T | A | -0.2080 | |
160 | T | A | -0.1937 | |
161 | T | A | -0.4127 | |
162 | T | A | -0.9430 | |
163 | T | A | -1.5629 | |
164 | R | A | -2.9890 | |
165 | E | A | -3.3442 | |
166 | T | A | -2.7627 | |
167 | Q | A | -3.3103 | |
168 | R | A | -3.5206 | |
169 | K | A | -2.9109 |