Project name: a2ca6b964466e39

Status: done

Started: 2025-06-27 04:23:05
Chain sequence(s) A: LPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDVSKTVAKWTSTSMPWAAAKDGKLPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVFDTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY
C: LPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDVSKTVAKWTSTSMPWAAAKDGKLPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVFDTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY
B: LPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDVSKTVAKWTSTSMPWAAAKDGKLPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVFDTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY
D: LPNITILATGGTIAGGGDSATKSNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDDVWLTLAKKINTDCDKTDGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAADKASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDVSKTVAKWTSTSMPWAAAKDGKLPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKTVFDTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQTKDPQQIQQIFNQY
input PDB
Selected Chain(s) A,B,C,D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:05)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:06)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:16:44)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/a2ca6b964466e39/tmp/folded.pdb                (00:16:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:33:44)
Show buried residues

Minimal score value
-3.3545
Maximal score value
0.9945
Average score
-0.5952
Total score value
-776.1251

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 L A 0.5900
2 P A -0.0287
3 N A -1.0742
4 I A 0.0000
5 T A -1.5251
6 I A 0.0000
7 L A 0.0000
8 A A 0.0000
9 T A 0.0000
10 G A 0.0000
11 G A 0.0000
12 T A 0.0000
13 I A 0.0000
14 A A 0.0000
15 G A 0.0000
16 G A 0.0000
17 G A -1.6684
18 D A -2.2666
19 S A -1.5300
20 A A -0.9556
21 T A -1.2677
22 K A -2.3931
23 S A -1.9181
24 N A -2.1301
25 Y A -1.2899
26 T A -0.7812
27 A A -0.6533
28 G A 0.0000
29 K A -1.7717
30 V A -1.3167
31 G A -1.7955
32 V A 0.0000
33 E A -3.2297
34 N A -2.4652
35 L A 0.0000
36 V A -1.7808
37 N A -2.3323
38 A A -1.1948
39 V A 0.0000
40 P A -1.4058
41 Q A -1.5519
42 L A 0.0000
43 K A -2.7498
44 D A -2.5039
45 I A -0.9693
46 A A 0.0000
47 N A -1.7513
48 V A -1.2605
49 K A -2.1804
50 G A -2.3350
51 E A -2.6574
52 Q A -1.8130
53 V A -0.6469
54 V A -0.3802
55 N A -1.2495
56 I A -0.4463
57 G A -0.4719
58 S A 0.0000
59 Q A -0.5758
60 D A -0.8177
61 M A 0.0000
62 N A -1.0545
63 D A -1.7780
64 D A -2.4426
65 V A 0.0000
66 W A 0.0000
67 L A 0.0000
68 T A -0.8847
69 L A 0.0000
70 A A 0.0000
71 K A -1.4633
72 K A -1.2642
73 I A 0.0000
74 N A -1.4634
75 T A -1.5942
76 D A -2.3473
77 C A -2.3625
78 D A -3.1007
79 K A -3.0454
80 T A 0.0000
81 D A -2.3473
82 G A 0.0000
83 F A 0.0000
84 V A 0.0000
85 I A 0.0000
86 T A 0.0000
87 H A 0.0000
88 G A 0.0000
89 T A 0.0000
90 D A 0.0000
91 T A 0.0000
92 M A 0.0000
93 E A 0.0000
94 E A 0.0000
95 T A 0.0000
96 A A 0.0000
97 Y A 0.0000
98 F A 0.0000
99 L A 0.0000
100 D A 0.0000
101 L A 0.0000
102 T A 0.0000
103 V A 0.0000
104 K A -0.9425
105 C A 0.0000
106 D A -1.5026
107 K A -1.8706
108 P A 0.0000
109 V A 0.0000
110 V A 0.0000
111 M A 0.0000
112 V A 0.0000
113 G A 0.0000
114 A A 0.0000
115 M A -0.0891
116 R A -0.2073
117 P A 0.0000
118 S A -0.3038
119 T A -0.6266
120 S A -0.6517
121 M A 0.0000
122 S A 0.0008
123 A A -0.0113
124 D A 0.0000
125 G A 0.0000
126 P A 0.1098
127 F A 0.2242
128 N A 0.0000
129 L A 0.0000
130 Y A 0.0000
131 N A 0.0000
132 A A 0.0000
133 V A 0.0000
134 V A 0.0000
135 T A 0.0000
136 A A 0.0000
137 A A -0.8501
138 D A -1.7403
139 K A -2.3111
140 A A -1.2441
141 S A 0.0000
142 A A -1.7329
143 N A -1.8929
144 R A -0.8909
145 G A -0.6121
146 V A 0.0000
147 L A 0.0000
148 V A 0.0000
149 V A 0.0000
150 M A 0.0000
151 N A -0.3349
152 D A -0.2944
153 T A -0.3017
154 V A 0.0000
155 L A 0.0000
156 D A 0.0000
157 G A 0.0000
158 R A 0.0000
159 D A 0.0000
160 V A 0.0000
161 T A 0.0000
162 K A 0.0000
163 T A -0.3933
164 N A -0.4219
165 T A 0.0000
166 T A -0.2958
167 D A -0.4458
168 V A 0.0000
169 A A 0.0000
170 T A 0.0000
171 F A 0.0000
172 K A -1.0334
173 S A 0.0000
174 V A -0.0045
175 N A 0.0000
176 Y A 0.0000
177 G A 0.0000
178 P A -0.0972
179 L A 0.0000
180 G A 0.0000
181 Y A -0.2991
182 I A 0.0000
183 H A -1.2310
184 N A -1.4101
185 G A -1.2887
186 K A -1.9865
187 I A -1.0167
188 D A -1.0878
189 V A -0.1714
190 S A 0.0000
191 K A 0.0000
192 T A -0.1269
193 V A 0.1332
194 A A 0.3173
195 K A 0.2322
196 W A 0.9635
197 T A 0.0724
198 S A 0.0000
199 T A -0.4977
200 S A -0.0391
201 M A 0.0000
202 P A -0.4127
203 W A 0.0000
204 A A -0.5891
205 A A 0.0000
206 A A -1.2623
207 K A -2.2400
208 D A -2.1934
209 G A -2.2159
210 K A -2.8557
211 L A 0.0000
212 P A 0.0000
213 K A -2.0704
214 V A 0.0000
215 G A 0.0000
216 I A 0.0000
217 V A 0.0000
218 Y A 0.0000
219 N A 0.0000
220 Y A 0.0000
221 A A 0.0000
222 N A -1.0610
223 A A 0.0000
224 S A 0.0000
225 D A -0.6921
226 L A -0.3368
227 P A 0.0000
228 A A 0.0000
229 K A -1.0373
230 A A -0.8244
231 L A 0.0000
232 V A -0.9037
233 D A -1.7868
234 A A -1.1280
235 G A -1.2472
236 Y A 0.0000
237 D A -1.3384
238 G A 0.0000
239 I A 0.0000
240 V A 0.0000
241 S A 0.0000
242 A A 0.0000
243 G A 0.0000
244 V A 0.0000
245 G A 0.0000
246 N A 0.0000
247 G A 0.0000
248 N A 0.0000
249 L A 0.0000
250 Y A 0.0000
251 K A -1.8778
252 T A -1.2810
253 V A 0.0000
254 F A -1.0052
255 D A -2.0339
256 T A -1.0864
257 L A 0.0000
258 A A -1.3078
259 T A -1.4180
260 A A 0.0000
261 A A -1.5223
262 K A -2.6256
263 N A -2.2778
264 G A -2.0980
265 T A -1.3794
266 A A 0.0000
267 V A 0.0000
268 V A 0.0000
269 R A 0.0000
270 S A 0.0000
271 S A 0.0000
272 R A -0.3028
273 V A 0.0000
274 P A -0.1766
275 T A -0.1205
276 G A -0.1150
277 A A -0.2934
278 T A 0.0000
279 T A -0.7915
280 Q A -1.6661
281 D A -2.0378
282 A A 0.0000
283 E A -1.2232
284 V A 0.0000
285 D A -2.6871
286 D A 0.0000
287 A A -1.5643
288 K A -2.2946
289 Y A -1.3322
290 G A -1.4362
291 F A 0.0000
292 V A 0.0000
293 A A 0.0000
294 S A 0.0000
295 G A -0.6007
296 T A -0.2998
297 L A 0.0000
298 N A -0.2624
299 P A 0.0000
300 Q A 0.0000
301 K A 0.0000
302 A A 0.0000
303 R A 0.0000
304 V A 0.0000
305 L A 0.0000
306 L A 0.0000
307 Q A 0.0000
308 L A 0.0000
309 A A 0.0000
310 L A 0.0000
311 T A -0.8778
312 Q A -1.6811
313 T A -1.9341
314 K A -2.7589
315 D A -2.5618
316 P A -1.9358
317 Q A -2.4972
318 Q A -2.8790
319 I A 0.0000
320 Q A 0.0000
321 Q A -2.3192
322 I A -1.3313
323 F A 0.0000
324 N A -1.9697
325 Q A -0.9988
326 Y A -0.2008
1 L B 0.6376
2 P B -0.1978
3 N B -1.3111
4 I B 0.0000
5 T B -1.5481
6 I B 0.0000
7 L B 0.0000
8 A B 0.0000
9 T B 0.0000
10 G B 0.0000
11 G B 0.0000
12 T B 0.0000
13 I B 0.0000
14 A B 0.0000
15 G B 0.0000
16 G B -0.9357
17 G B -1.3382
18 D B -2.1338
19 S B -1.2876
20 A B -0.7039
21 T B -0.7804
22 K B -1.4569
23 S B -1.3138
24 N B -1.6688
25 Y B -0.9476
26 T B -0.7556
27 A B -0.5355
28 G B -0.7936
29 K B -1.6743
30 V B -1.2370
31 G B -1.6802
32 V B 0.0000
33 E B -3.1992
34 N B -2.4987
35 L B 0.0000
36 V B -1.9338
37 N B -2.3436
38 A B -1.2099
39 V B 0.0000
40 P B -1.4250
41 Q B -1.5809
42 L B 0.0000
43 K B -2.6961
44 D B -2.4237
45 I B -0.8728
46 A B 0.0000
47 N B -1.8018
48 V B -1.6762
49 K B -2.4848
50 G B -2.2602
51 E B -2.1150
52 Q B -1.1850
53 V B -0.2469
54 V B 0.0649
55 N B -0.5657
56 I B -0.1651
57 G B -0.3576
58 S B 0.0000
59 Q B -0.6534
60 D B -1.0054
61 M B 0.0000
62 N B -0.9248
63 D B 0.0000
64 D B -1.8014
65 V B 0.0000
66 W B 0.0000
67 L B 0.0000
68 T B -0.6867
69 L B 0.0000
70 A B 0.0000
71 K B -1.4436
72 K B -1.2754
73 I B 0.0000
74 N B -1.4443
75 T B -1.5642
76 D B -2.2646
77 C B -2.2897
78 D B -3.0199
79 K B -3.0141
80 T B 0.0000
81 D B -2.0797
82 G B 0.0000
83 F B 0.0000
84 V B 0.0000
85 I B 0.0000
86 T B 0.0000
87 H B 0.0000
88 G B 0.0000
89 T B 0.0000
90 D B 0.0000
91 T B 0.0000
92 M B 0.0000
93 E B 0.0000
94 E B 0.0000
95 T B 0.0000
96 A B 0.0000
97 Y B 0.0000
98 F B 0.0000
99 L B 0.0000
100 D B 0.0000
101 L B 0.0000
102 T B 0.0000
103 V B 0.0000
104 K B -0.8977
105 C B 0.0000
106 D B -1.5492
107 K B -1.7974
108 P B 0.0000
109 V B 0.0000
110 V B 0.0000
111 M B 0.0000
112 V B 0.0000
113 G B 0.0000
114 A B 0.0000
115 M B 0.0000
116 R B -0.3094
117 P B 0.0000
118 S B -0.1901
119 T B -0.5578
120 S B -0.4489
121 M B 0.0218
122 S B 0.0000
123 A B 0.0000
124 D B 0.0000
125 G B 0.0000
126 P B 0.0238
127 F B 0.1754
128 N B 0.0000
129 L B 0.0000
130 Y B 0.0000
131 N B 0.0000
132 A B 0.0000
133 V B 0.0000
134 V B -0.1695
135 T B 0.0000
136 A B 0.0000
137 A B -0.7302
138 D B -1.6597
139 K B -2.2624
140 A B -1.2324
141 S B 0.0000
142 A B -1.7032
143 N B -1.9153
144 R B -0.9094
145 G B -0.6403
146 V B 0.0000
147 L B 0.0000
148 V B 0.0000
149 V B 0.0000
150 M B 0.0000
151 N B -0.3526
152 D B -0.3428
153 T B -0.2798
154 V B 0.0000
155 L B 0.0000
156 D B 0.0000
157 G B 0.0000
158 R B 0.0000
159 D B 0.0000
160 V B 0.0000
161 T B -0.2594
162 K B 0.0000
163 T B -0.3438
164 N B -0.3801
165 T B 0.0000
166 T B -0.3292
167 D B -0.4429
168 V B 0.0000
169 A B -0.4239
170 T B 0.0000
171 F B 0.0000
172 K B -0.8486
173 S B 0.0000
174 V B 0.0610
175 N B 0.0000
176 Y B 0.0000
177 G B 0.0000
178 P B -0.0688
179 L B 0.0000
180 G B 0.0000
181 Y B -0.2855
182 I B 0.0000
183 H B -1.4783
184 N B -2.0313
185 G B -1.5261
186 K B -2.0201
187 I B -0.9815
188 D B -1.0052
189 V B -0.1169
190 S B 0.0000
191 K B 0.0000
192 T B -0.1229
193 V B 0.1522
194 A B 0.3111
195 K B 0.1546
196 W B 0.8477
197 T B 0.0118
198 S B 0.0000
199 T B -0.5421
200 S B -0.1720
201 M B 0.0000
202 P B -0.4714
203 W B 0.0000
204 A B -0.5530
205 A B 0.0000
206 A B -1.3687
207 K B -2.3165
208 D B -2.1340
209 G B -2.1789
210 K B -2.6948
211 L B 0.0000
212 P B -1.1015
213 K B -1.6455
214 V B 0.0000
215 G B 0.0000
216 I B 0.0000
217 V B 0.0000
218 Y B 0.0000
219 N B 0.0000
220 Y B 0.0000
221 A B 0.0000
222 N B -1.2677
223 A B 0.0000
224 S B -0.5693
225 D B -0.6442
226 L B -0.3695
227 P B 0.0000
228 A B 0.0000
229 K B -1.0962
230 A B -0.9031
231 L B 0.0000
232 V B -0.9410
233 D B -1.8086
234 A B -1.1081
235 G B -1.1835
236 Y B -0.9084
237 D B -1.2755
238 G B 0.0000
239 I B 0.0000
240 V B 0.0000
241 S B 0.0000
242 A B 0.0000
243 G B 0.0000
244 V B 0.0000
245 G B 0.0000
246 N B -0.3332
247 G B 0.0000
248 N B 0.0000
249 L B 0.0000
250 Y B -1.1425
251 K B -2.1129
252 T B -1.2722
253 V B 0.0000
254 F B -0.9033
255 D B -1.5426
256 T B 0.0000
257 L B 0.0000
258 A B -1.0259
259 T B -1.1161
260 A B 0.0000
261 A B 0.0000
262 K B -2.6129
263 N B -2.2957
264 G B -2.1931
265 T B -1.4237
266 A B 0.0000
267 V B 0.0000
268 V B 0.0000
269 R B 0.0000
270 S B 0.0000
271 S B 0.0000
272 R B -0.3161
273 V B 0.0000
274 P B -0.1823
275 T B -0.1177
276 G B -0.1541
277 A B -0.2934
278 T B 0.0000
279 T B -0.6343
280 Q B -1.3198
281 D B -1.8310
282 A B 0.0000
283 E B -1.1771
284 V B 0.0000
285 D B -2.0368
286 D B 0.0000
287 A B -1.3666
288 K B -2.0540
289 Y B -1.0888
290 G B -1.4802
291 F B 0.0000
292 V B 0.0000
293 A B 0.0000
294 S B 0.0000
295 G B -0.6037
296 T B -0.3082
297 L B 0.0000
298 N B -0.2405
299 P B 0.0000
300 Q B 0.0000
301 K B 0.0000
302 A B 0.0000
303 R B 0.0000
304 V B 0.0000
305 L B 0.0000
306 L B 0.0000
307 Q B 0.0000
308 L B 0.0000
309 A B 0.0000
310 L B 0.0000
311 T B -0.9662
312 Q B -1.8182
313 T B -2.0291
314 K B -2.8541
315 D B -2.5758
316 P B -1.9703
317 Q B -2.5172
318 Q B -2.9203
319 I B 0.0000
320 Q B 0.0000
321 Q B -2.2994
322 I B 0.0000
323 F B 0.0000
324 N B -2.0558
325 Q B -0.9891
326 Y B 0.0000
1 L C 0.6966
2 P C -0.1305
3 N C -1.1653
4 I C 0.0000
5 T C -1.3698
6 I C 0.0000
7 L C 0.0000
8 A C 0.0000
9 T C 0.0000
10 G C 0.0000
11 G C 0.0000
12 T C 0.0000
13 I C 0.0000
14 A C 0.0000
15 G C 0.0000
16 G C -0.8465
17 G C -1.5817
18 D C -2.2397
19 S C -1.4430
20 A C -0.8244
21 T C -0.9807
22 K C -1.9475
23 S C -1.5041
24 N C -1.8364
25 Y C -1.0836
26 T C -0.7547
27 A C -0.5192
28 G C -0.8042
29 K C -1.3558
30 V C -0.3197
31 G C -1.2001
32 V C 0.0000
33 E C -3.0107
34 N C -2.4034
35 L C 0.0000
36 V C -1.9378
37 N C -2.3348
38 A C -1.2091
39 V C 0.0000
40 P C -1.6439
41 Q C -1.5974
42 L C 0.0000
43 K C -2.6709
44 D C -2.4447
45 I C -0.9960
46 A C 0.0000
47 N C -1.4213
48 V C -1.3258
49 K C -2.1711
50 G C -2.1755
51 E C -1.9484
52 Q C -1.0718
53 V C -0.2328
54 V C -0.2452
55 N C -1.0489
56 I C -0.3984
57 G C -0.4372
58 S C 0.0000
59 Q C -0.5348
60 D C -0.7440
61 M C 0.0000
62 N C -1.0829
63 D C -1.7634
64 D C -2.4837
65 V C 0.0000
66 W C 0.0000
67 L C 0.0000
68 T C -0.8198
69 L C 0.0000
70 A C 0.0000
71 K C -1.2834
72 K C -0.8021
73 I C 0.0000
74 N C -1.3503
75 T C -1.2858
76 D C -1.7573
77 C C -2.1082
78 D C -2.9055
79 K C -2.8667
80 T C 0.0000
81 D C -1.9476
82 G C 0.0000
83 F C 0.0000
84 V C 0.0000
85 I C 0.0000
86 T C 0.0000
87 H C 0.0000
88 G C 0.0000
89 T C 0.0000
90 D C 0.0000
91 T C 0.0000
92 M C 0.0000
93 E C 0.0000
94 E C 0.0000
95 T C 0.0000
96 A C 0.0000
97 Y C 0.0000
98 F C 0.0000
99 L C 0.0000
100 D C 0.0000
101 L C 0.0000
102 T C 0.0000
103 V C 0.0000
104 K C -1.1294
105 C C 0.0000
106 D C -1.8005
107 K C -2.0243
108 P C 0.0000
109 V C 0.0000
110 V C 0.0000
111 M C 0.0000
112 V C 0.0000
113 G C 0.0000
114 A C 0.0000
115 M C -0.0835
116 R C -0.3770
117 P C 0.0000
118 S C -0.5011
119 T C -0.7228
120 S C -0.6450
121 M C 0.0000
122 S C -0.0167
123 A C -0.0465
124 D C 0.0000
125 G C 0.0000
126 P C 0.0495
127 F C 0.1954
128 N C 0.0000
129 L C 0.0000
130 Y C 0.0000
131 N C 0.0000
132 A C 0.0000
133 V C 0.0000
134 V C 0.0000
135 T C 0.0000
136 A C 0.0000
137 A C -0.7744
138 D C -1.6796
139 K C -2.2865
140 A C -1.2302
141 S C 0.0000
142 A C -1.8135
143 N C -2.0435
144 R C -1.0016
145 G C -0.7456
146 V C 0.0000
147 L C 0.0000
148 V C 0.0000
149 V C 0.0000
150 M C 0.0000
151 N C -0.3554
152 D C -0.3072
153 T C -0.2606
154 V C 0.0000
155 L C 0.0000
156 D C 0.0000
157 G C 0.0000
158 R C 0.0000
159 D C 0.0000
160 V C 0.0000
161 T C 0.0000
162 K C 0.0000
163 T C -0.3604
164 N C -0.3819
165 T C 0.0000
166 T C -0.2868
167 D C -0.4384
168 V C 0.0000
169 A C 0.0000
170 T C 0.0000
171 F C 0.0000
172 K C -0.8988
173 S C 0.0000
174 V C 0.0367
175 N C 0.0000
176 Y C 0.0000
177 G C 0.0000
178 P C -0.0711
179 L C 0.0000
180 G C 0.0000
181 Y C -0.2216
182 I C 0.0000
183 H C -1.3285
184 N C -1.7951
185 G C -1.4760
186 K C -2.0194
187 I C -0.9653
188 D C -0.9026
189 V C -0.0652
190 S C 0.0000
191 K C 0.0000
192 T C -0.1357
193 V C 0.1201
194 A C 0.2690
195 K C 0.0305
196 W C 0.7256
197 T C -0.1190
198 S C 0.0000
199 T C -0.6578
200 S C -0.2065
201 M C 0.0000
202 P C -0.4285
203 W C 0.0000
204 A C -0.6619
205 A C 0.0000
206 A C -1.2212
207 K C -2.2658
208 D C -2.2381
209 G C -2.2613
210 K C -2.8252
211 L C 0.0000
212 P C 0.0000
213 K C -1.5550
214 V C 0.0000
215 G C 0.0000
216 I C 0.0000
217 V C 0.0000
218 Y C 0.0000
219 N C 0.0000
220 Y C 0.0000
221 A C 0.0000
222 N C -1.1481
223 A C 0.0000
224 S C -0.5053
225 D C -0.6908
226 L C -0.1664
227 P C 0.0000
228 A C 0.0000
229 K C -1.0561
230 A C -0.8297
231 L C 0.0000
232 V C -0.9609
233 D C -1.8483
234 A C -1.0965
235 G C -1.2079
236 Y C 0.0000
237 D C -1.0952
238 G C 0.0000
239 I C 0.0000
240 V C 0.0000
241 S C 0.0000
242 A C 0.0000
243 G C 0.0000
244 V C 0.0000
245 G C 0.0000
246 N C -0.3519
247 G C 0.0000
248 N C 0.0000
249 L C 0.0000
250 Y C 0.0000
251 K C -1.9009
252 T C -1.2949
253 V C 0.0000
254 F C -1.0258
255 D C -2.0168
256 T C -1.1044
257 L C 0.0000
258 A C -1.2763
259 T C -1.4082
260 A C 0.0000
261 A C -1.4649
262 K C -2.4028
263 N C -2.2062
264 G C -2.0340
265 T C -1.3597
266 A C 0.0000
267 V C 0.0000
268 V C 0.0000
269 R C 0.0000
270 S C 0.0000
271 S C 0.0000
272 R C -0.3123
273 V C 0.0000
274 P C -0.1772
275 T C -0.1171
276 G C -0.1581
277 A C -0.3211
278 T C 0.0000
279 T C -0.7018
280 Q C -1.4975
281 D C -1.9850
282 A C 0.0000
283 E C -1.1679
284 V C 0.0000
285 D C -2.4778
286 D C 0.0000
287 A C -1.5454
288 K C -2.0449
289 Y C -1.4141
290 G C -1.4423
291 F C 0.0000
292 V C 0.0000
293 A C 0.0000
294 S C 0.0000
295 G C -0.6387
296 T C -0.3173
297 L C 0.0000
298 N C -0.2608
299 P C 0.0000
300 Q C 0.0000
301 K C 0.0000
302 A C 0.0000
303 R C 0.0000
304 V C 0.0000
305 L C 0.0000
306 L C 0.0000
307 Q C 0.0000
308 L C 0.0000
309 A C 0.0000
310 L C -0.9822
311 T C -0.6647
312 Q C -1.4246
313 T C -1.7307
314 K C -2.4675
315 D C -2.6674
316 P C -1.8980
317 Q C -2.3327
318 Q C -2.4442
319 I C 0.0000
320 Q C 0.0000
321 Q C -1.8756
322 I C 0.0000
323 F C 0.0000
324 N C -1.9330
325 Q C -1.0343
326 Y C 0.0000
1 L D 0.5515
2 P D -0.1397
3 N D -1.4424
4 I D 0.0000
5 T D -1.6723
6 I D 0.0000
7 L D 0.0000
8 A D 0.0000
9 T D 0.0000
10 G D 0.0000
11 G D 0.0000
12 T D 0.0000
13 I D 0.0000
14 A D 0.0000
15 G D 0.0000
16 G D 0.0000
17 G D -1.6906
18 D D -2.2949
19 S D -1.4788
20 A D -0.8850
21 T D -1.0084
22 K D -1.9439
23 S D -1.7813
24 N D -2.2378
25 Y D -1.4230
26 T D -0.8500
27 A D -0.6476
28 G D 0.0000
29 K D -1.7607
30 V D -1.2659
31 G D -1.8162
32 V D 0.0000
33 E D -3.3545
34 N D -2.5815
35 L D 0.0000
36 V D 0.0000
37 N D -2.5080
38 A D -1.3197
39 V D 0.0000
40 P D -1.5169
41 Q D -1.6127
42 L D 0.0000
43 K D -3.0186
44 D D -2.4811
45 I D -0.9329
46 A D 0.0000
47 N D -2.1079
48 V D -1.7678
49 K D -2.8348
50 G D -2.4301
51 E D -2.3043
52 Q D -1.4182
53 V D -0.4259
54 V D -0.2642
55 N D -1.2201
56 I D -0.4344
57 G D -0.6614
58 S D 0.0000
59 Q D -0.6415
60 D D -1.0034
61 M D 0.0000
62 N D -0.8990
63 D D 0.0000
64 D D -1.7215
65 V D 0.0000
66 W D 0.0000
67 L D 0.0000
68 T D -0.6583
69 L D 0.0000
70 A D 0.0000
71 K D -1.4342
72 K D -1.2265
73 I D 0.0000
74 N D -1.4735
75 T D -1.6000
76 D D -2.3595
77 C D -2.3757
78 D D -3.1093
79 K D -3.0768
80 T D 0.0000
81 D D -2.3454
82 G D 0.0000
83 F D 0.0000
84 V D 0.0000
85 I D 0.0000
86 T D 0.0000
87 H D 0.0000
88 G D 0.0000
89 T D 0.0000
90 D D 0.0000
91 T D 0.0000
92 M D 0.0000
93 E D 0.0000
94 E D 0.0000
95 T D 0.0000
96 A D 0.0000
97 Y D 0.0000
98 F D 0.0000
99 L D 0.0000
100 D D 0.0000
101 L D 0.0000
102 T D 0.0000
103 V D 0.0000
104 K D -0.9435
105 C D 0.0000
106 D D -1.5207
107 K D -1.9384
108 P D 0.0000
109 V D 0.0000
110 V D 0.0000
111 M D 0.0000
112 V D 0.0000
113 G D 0.0000
114 A D 0.0000
115 M D -0.0848
116 R D -0.2077
117 P D 0.0000
118 S D -0.1155
119 T D -0.5780
120 S D -0.5892
121 M D -0.0720
122 S D 0.0229
123 A D -0.0168
124 D D 0.0000
125 G D 0.0000
126 P D 0.0263
127 F D 0.2207
128 N D 0.0000
129 L D 0.0000
130 Y D 0.1672
131 N D 0.0000
132 A D 0.0000
133 V D 0.0000
134 V D -0.1796
135 T D 0.0000
136 A D 0.0000
137 A D -0.8003
138 D D -1.7371
139 K D -2.3285
140 A D -1.2478
141 S D 0.0000
142 A D -1.7455
143 N D -1.8936
144 R D -0.8678
145 G D -0.6083
146 V D 0.0000
147 L D 0.0000
148 V D 0.0000
149 V D 0.0000
150 M D 0.0000
151 N D -0.3259
152 D D -0.2608
153 T D -0.2539
154 V D 0.0000
155 L D 0.0000
156 D D 0.0000
157 G D 0.0000
158 R D 0.0000
159 D D 0.0000
160 V D 0.0000
161 T D 0.0000
162 K D 0.0000
163 T D -0.3800
164 N D -0.4446
165 T D 0.0000
166 T D -0.3007
167 D D -0.4282
168 V D 0.0000
169 A D 0.0000
170 T D 0.0000
171 F D 0.0000
172 K D -0.9697
173 S D 0.0000
174 V D 0.0314
175 N D 0.0000
176 Y D 0.0000
177 G D 0.0000
178 P D 0.0000
179 L D 0.0000
180 G D 0.0000
181 Y D -0.1224
182 I D 0.0000
183 H D -1.2786
184 N D -1.5245
185 G D -1.2469
186 K D -1.9145
187 I D -0.8966
188 D D -0.8957
189 V D -0.0645
190 S D 0.0000
191 K D 0.0000
192 T D -0.1100
193 V D 0.1789
194 A D 0.3456
195 K D 0.1454
196 W D 0.9945
197 T D 0.0762
198 S D 0.0000
199 T D -0.4819
200 S D -0.0780
201 M D 0.0000
202 P D -0.4710
203 W D 0.0000
204 A D -0.5680
205 A D 0.0000
206 A D -1.2653
207 K D -2.2528
208 D D -2.0181
209 G D -2.0969
210 K D -2.7258
211 L D 0.0000
212 P D -1.3264
213 K D -2.1544
214 V D 0.0000
215 G D 0.0000
216 I D 0.0000
217 V D 0.0000
218 Y D 0.0000
219 N D 0.0000
220 Y D 0.0000
221 A D 0.0000
222 N D -1.1932
223 A D 0.0000
224 S D -0.5709
225 D D -0.7715
226 L D -0.5254
227 P D 0.0000
228 A D 0.0000
229 K D -1.4346
230 A D -0.9965
231 L D 0.0000
232 V D -0.9724
233 D D -1.8599
234 A D -1.1356
235 G D -1.2107
236 Y D -0.9974
237 D D -1.2673
238 G D 0.0000
239 I D 0.0000
240 V D 0.0000
241 S D 0.0000
242 A D 0.0000
243 G D 0.0000
244 V D 0.0000
245 G D 0.0000
246 N D -0.3739
247 G D 0.0000
248 N D 0.0000
249 L D 0.0000
250 Y D -1.1136
251 K D -2.0455
252 T D -1.3345
253 V D 0.0000
254 F D -0.8298
255 D D -1.3608
256 T D -0.8803
257 L D 0.0000
258 A D -0.9872
259 T D -1.1025
260 A D 0.0000
261 A D -1.4263
262 K D -2.4514
263 N D -2.2622
264 G D -2.1302
265 T D -1.3406
266 A D 0.0000
267 V D 0.0000
268 V D 0.0000
269 R D 0.0000
270 S D 0.0000
271 S D 0.0000
272 R D -0.3193
273 V D 0.0000
274 P D -0.1749
275 T D -0.1089
276 G D -0.1518
277 A D -0.3567
278 T D 0.0000
279 T D -0.6892
280 Q D -1.4924
281 D D -1.4702
282 A D 0.0000
283 E D -1.0972
284 V D 0.0000
285 D D -2.5084
286 D D 0.0000
287 A D -1.5473
288 K D -2.1091
289 Y D -1.3162
290 G D -1.4373
291 F D 0.0000
292 V D 0.0000
293 A D 0.0000
294 S D 0.0000
295 G D -0.6687
296 T D -0.3246
297 L D 0.0000
298 N D -0.2603
299 P D 0.0000
300 Q D 0.0000
301 K D 0.0000
302 A D 0.0000
303 R D 0.0000
304 V D 0.0000
305 L D 0.0000
306 L D 0.0000
307 Q D 0.0000
308 L D 0.0000
309 A D 0.0000
310 L D 0.0000
311 T D -0.8893
312 Q D -1.6914
313 T D -1.9650
314 K D -2.7772
315 D D -2.5358
316 P D -1.9484
317 Q D -2.4764
318 Q D -2.8657
319 I D 0.0000
320 Q D 0.0000
321 Q D -2.1762
322 I D 0.0000
323 F D 0.0000
324 N D -2.0494
325 Q D -0.9576
326 Y D -0.2516
Download PDB file
View in 3Dmol

Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.4479 3.1823 View CSV PDB
4.5 -0.4857 3.1825 View CSV PDB
5.0 -0.5276 3.1831 View CSV PDB
5.5 -0.5659 3.1849 View CSV PDB
6.0 -0.5918 3.1899 View CSV PDB
6.5 -0.5986 3.2006 View CSV PDB
7.0 -0.5878 3.2181 View CSV PDB
7.5 -0.566 3.2399 View CSV PDB
8.0 -0.5375 3.2637 View CSV PDB
8.5 -0.5024 3.2881 View CSV PDB
9.0 -0.4582 3.3125 View CSV PDB