Project name: Soy beta-Conglycinin Homotrimer

Status: done

Started: 2026-08-11 21:32:09
Chain sequence(s) A: REDENNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGEEEEQRQQEGVIVELSKEQIRQLSRRAKSSSRKTISSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDA
C: DENNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGQEGVIVELDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKPLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDA
B: REDENNPFYFRSSNSFQTLFENQNGRIRLLQRFNKRSPQLENLRDYRIVQFQSKPNTILLPHHADADFLLFVLSGRAILTLVNNDDRDSYNLHPGDAQRIPAGTTYYLVNPHDHQNLKMIWLAIPVNKPGRYDDFFLSSTQAQQSYLQGFSHNILETSFHSEFEEINRVLFGQEGVIVELSKEQIRQLSRRAKSSSRKTISSEDEPFNLRSRNPIYSNNFGKFFEITPEKNPQLRDLDIFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKLEVQRYRAELSEDDVFVIPAAYPFVVNATSNLNFLAFGINAENNQRNFLAGEKDNVVRQIERQVQELAFPGSAQDVERLLKKQRESYFVDA
input PDB
Selected Chain(s) A,B,C
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:02)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:02)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:02)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:02)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:10)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:10)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:53:42)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/a9b6e139bfe8017/tmp/folded.pdb                (00:53:42)
[INFO]       Main:     Simulation completed successfully.                                          (01:15:57)
Show buried residues

Minimal score value
-4.7946
Maximal score value
0.4338
Average score
-1.0752
Total score value
-1175.191

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
4 R A -3.2379
5 E A -4.3738
6 D A -4.2560
7 E A -3.9527
8 N A -3.4827
9 N A 0.0000
10 P A 0.0000
11 F A 0.0000
12 Y A 0.0000
13 F A 0.0000
14 R A -2.3213
15 S A 0.0000
16 S A -1.3878
17 N A -1.9930
18 S A 0.0000
19 F A -1.0406
20 Q A -1.2738
21 T A -0.8689
22 L A -0.2574
23 F A -0.7572
24 E A -2.3395
25 N A -2.1728
26 Q A -2.1928
27 N A 0.0000
28 G A 0.0000
29 R A -2.0165
30 I A 0.0000
31 R A -0.8624
32 L A -0.3690
33 L A 0.0000
34 Q A -1.5271
35 R A -2.0113
36 F A 0.0000
37 N A -2.2111
38 K A -2.5854
39 R A -1.9412
40 S A 0.0000
41 P A -1.5211
42 Q A -1.3799
43 L A 0.0000
44 E A -2.0359
45 N A -1.6258
46 L A 0.0000
47 R A -2.0680
48 D A -1.8853
49 Y A -0.9902
50 R A -0.8254
51 I A 0.0000
52 V A 0.0000
53 Q A 0.0000
54 F A 0.0000
55 Q A -1.4996
56 S A 0.0000
57 K A -2.7845
58 P A -2.6379
59 N A -2.5510
60 T A 0.0000
61 I A 0.0000
62 L A 0.0000
63 L A 0.0000
64 P A 0.0000
65 H A 0.0000
66 H A 0.0000
67 A A 0.0000
68 D A 0.0000
69 A A 0.0000
70 D A 0.0000
71 F A 0.0000
72 L A 0.0000
73 L A 0.0000
74 F A 0.0000
75 V A 0.0000
76 L A 0.0000
77 S A -0.8384
78 G A -1.3256
79 R A -1.0420
80 A A 0.0000
81 I A 0.0000
82 L A 0.0000
83 T A 0.0000
84 L A 0.0000
85 V A 0.0000
86 N A -2.2981
87 N A -2.5458
88 D A -3.5717
89 D A -3.5782
90 R A -2.6661
91 D A -2.1844
92 S A -1.7158
93 Y A 0.0000
94 N A -1.2359
95 L A 0.0000
96 H A -0.6698
97 P A -0.6661
98 G A -0.5050
99 D A 0.0000
100 A A 0.0000
101 Q A 0.0000
102 R A -0.6671
103 I A 0.0000
104 P A -0.3886
105 A A 0.0000
106 G A 0.0000
107 T A -0.3148
108 T A 0.0000
109 Y A 0.0000
110 Y A 0.0000
111 L A 0.0000
112 V A 0.0000
113 N A 0.0000
114 P A 0.0000
115 H A -2.1482
116 D A -2.6778
117 H A -2.5286
118 Q A -2.7940
119 N A -2.4320
120 L A 0.0000
121 K A -1.2021
122 M A 0.0000
123 I A 0.0000
124 W A 0.0000
125 L A 0.0000
126 A A 0.0000
127 I A -0.3014
128 P A -0.7031
129 V A -0.4179
130 N A 0.0000
131 K A -1.2686
132 P A 0.0000
133 G A 0.0000
134 R A -2.1863
135 Y A -0.9860
136 D A -0.9917
137 D A -0.5462
138 F A 0.0000
139 F A 0.0000
140 L A 0.0000
141 S A 0.0000
142 S A 0.0000
143 T A 0.0000
144 Q A -3.1085
145 A A -1.3194
146 Q A 0.0000
147 Q A -1.1277
148 S A 0.0000
149 Y A 0.0000
150 L A 0.0000
151 Q A -0.5529
152 G A 0.0000
153 F A 0.0000
154 S A -1.1944
155 H A -2.2727
156 N A -2.2068
157 I A 0.0000
158 L A 0.0000
159 E A -2.5610
160 T A -1.7824
161 S A 0.0000
162 F A 0.0000
163 H A -2.5703
164 S A -2.1730
165 E A -3.1660
166 F A -2.8447
167 E A -3.2726
168 E A -2.6919
169 I A 0.0000
170 N A -2.7014
171 R A -3.3789
172 V A 0.0000
173 L A 0.0000
174 F A 0.0000
175 G A 0.0000
176 E A -3.9573
177 E A -4.1355
178 E A -4.5374
179 E A -4.7946
180 Q A -3.7042
181 R A -3.1880
182 Q A -3.1197
183 Q A -2.4840
184 E A -3.1695
185 G A 0.0000
186 V A 0.0000
187 I A 0.0000
188 V A 0.0000
189 E A -2.5529
190 L A -1.8879
191 S A -2.2962
192 K A -3.5391
193 E A -3.4514
194 Q A -2.7809
195 I A 0.0000
196 R A -3.6908
197 Q A -3.1129
198 L A 0.0000
199 S A -2.2060
200 R A -3.4783
201 R A -3.2416
202 A A -2.2659
203 K A -2.2340
204 S A -0.9814
205 S A -1.3161
206 S A -1.8282
207 R A -3.2323
208 K A -2.7424
209 T A 0.0000
210 I A 0.0000
211 S A -2.0952
212 S A -2.3989
213 E A -3.2318
214 D A -2.9764
215 E A -2.4032
216 P A 0.0000
217 F A 0.0000
218 N A -1.1538
219 L A 0.0000
220 R A -2.0743
221 S A -2.5123
222 R A -2.9737
223 N A -2.2111
224 P A -1.0313
225 I A 0.3769
226 Y A 0.0000
227 S A -0.8973
228 N A -1.3023
229 N A -1.8815
230 F A -1.6898
231 G A 0.0000
232 K A -1.2804
233 F A 0.0000
234 F A 0.0000
235 E A 0.0000
236 I A 0.0000
237 T A -1.7737
238 P A 0.0000
239 E A -3.1599
240 K A -2.1022
241 N A 0.0000
242 P A -2.6415
243 Q A 0.0000
244 L A 0.0000
245 R A -3.8447
246 D A -2.8796
247 L A -1.7666
248 D A -2.6258
249 I A 0.0000
250 F A 0.0000
251 L A 0.0000
252 S A 0.0000
253 S A 0.0000
254 V A 0.0000
255 D A -1.3986
256 I A 0.0000
257 N A -2.7618
258 E A -3.2655
259 G A -2.0568
260 A A 0.0000
261 L A 0.0000
262 L A 0.0000
263 L A 0.0000
264 P A 0.0000
265 H A 0.0000
266 F A 0.0000
267 N A 0.0000
268 S A 0.0000
269 K A -1.0042
270 A A 0.0000
271 I A 0.0000
272 V A 0.0000
273 I A 0.0000
274 L A 0.0000
275 V A 0.0000
276 I A 0.0000
277 N A -1.9610
278 E A -3.1389
279 G A -2.7856
280 D A -2.7511
281 A A 0.0000
282 N A -1.4545
283 I A 0.0000
284 E A 0.0000
285 L A 0.0000
286 V A 0.0000
287 G A 0.0000
288 I A 0.0000
289 K A -2.4278
302 L A -1.0556
303 E A -2.5037
304 V A -1.6836
305 Q A -1.9123
306 R A -2.4316
307 Y A 0.0000
308 R A -2.4773
309 A A 0.0000
310 E A -2.8647
311 L A 0.0000
312 S A -2.3878
313 E A -3.0118
314 D A -1.6902
315 D A 0.0000
316 V A 0.0000
317 F A 0.0000
318 V A 0.0000
319 I A 0.0000
320 P A 0.0000
321 A A 0.0000
322 A A 0.0000
323 Y A 0.0000
324 P A 0.0000
325 F A 0.0000
326 V A 0.0000
327 V A 0.0000
328 N A -1.2759
329 A A 0.0000
330 T A -1.7965
331 S A -2.3644
332 N A -3.0328
333 L A 0.0000
334 N A -1.7482
335 F A 0.0000
336 L A 0.0000
337 A A 0.0000
338 F A 0.0000
339 G A 0.0000
340 I A 0.0000
341 N A -1.6416
342 A A 0.0000
343 E A -3.4734
344 N A -2.8265
345 N A -1.7963
346 Q A -1.3437
347 R A 0.0000
348 N A 0.0000
349 F A 0.0000
350 L A 0.0000
351 A A 0.0000
352 G A 0.0000
353 E A -3.9485
354 K A -3.1685
355 D A -2.5193
356 N A 0.0000
357 V A 0.0000
358 V A 0.0000
359 R A -2.0769
360 Q A -2.2365
361 I A 0.0000
362 E A -2.3381
363 R A -3.3656
364 Q A -2.5040
365 V A 0.0000
366 Q A 0.0000
367 E A -2.4855
368 L A -1.0528
369 A A 0.0000
370 F A 0.0000
371 P A -1.2735
372 G A -1.4806
373 S A -2.0471
374 A A -2.6089
375 Q A -2.8063
376 D A -2.6713
377 V A 0.0000
378 E A -3.0854
379 R A -3.4700
380 L A 0.0000
381 L A 0.0000
382 K A -3.9836
383 K A -3.4145
384 Q A 0.0000
385 R A -3.6421
386 E A -2.9635
387 S A -1.7876
388 Y A 0.0000
389 F A 0.0000
390 V A 0.0000
391 D A -2.4598
392 A A -1.5936
4 R B -4.1231
5 E B -4.5601
6 D B -4.0262
7 E B -3.9022
8 N B -3.6317
9 N B 0.0000
10 P B -1.6206
11 F B 0.0000
12 Y B 0.0000
13 F B 0.0000
14 R B -2.5631
15 S B -1.6300
16 S B -1.3532
17 N B -1.9028
18 S B 0.0000
19 F B -1.0145
20 Q B -1.2465
21 T B -0.7568
22 L B -0.2465
23 F B -0.8223
24 E B -2.2502
25 N B -2.0271
26 Q B -2.1894
27 N B 0.0000
28 G B -1.9746
29 R B -1.5991
30 I B 0.0000
31 R B 0.0000
32 L B 0.0000
33 L B 0.0000
34 Q B -1.2640
35 R B -1.6220
36 F B 0.0000
37 N B -2.0706
38 K B -2.5034
39 R B -1.8255
40 S B 0.0000
41 P B -1.3183
42 Q B -1.1955
43 L B 0.0000
44 E B -1.5675
45 N B -1.3654
46 L B 0.0000
47 R B -2.0120
48 D B -1.6357
49 Y B -0.8807
50 R B -0.7257
51 I B 0.0000
52 V B 0.0000
53 Q B 0.0000
54 F B 0.0000
55 Q B -1.2601
56 S B 0.0000
57 K B -2.7684
58 P B -2.5277
59 N B -2.0774
60 T B 0.0000
61 I B 0.0000
62 L B 0.0000
63 L B 0.0000
64 P B 0.0000
65 H B 0.0000
66 H B 0.0000
67 A B 0.0000
68 D B 0.0000
69 A B 0.0000
70 D B 0.0000
71 F B 0.0000
72 L B 0.0000
73 L B 0.0000
74 F B 0.0000
75 V B 0.0000
76 L B 0.0000
77 S B -0.9414
78 G B -1.4516
79 R B -1.1384
80 A B 0.0000
81 I B 0.0000
82 L B 0.0000
83 T B 0.0000
84 L B 0.0000
85 V B 0.0000
86 N B -2.0554
87 N B -2.3691
88 D B -3.5002
89 D B -3.4511
90 R B -2.8172
91 D B -2.2290
92 S B -1.8671
93 Y B 0.0000
94 N B -1.4224
95 L B 0.0000
96 H B -0.6799
97 P B -0.6071
98 G B 0.0000
99 D B 0.0000
100 A B 0.0000
101 Q B 0.0000
102 R B -1.2576
103 I B 0.0000
104 P B -0.5739
105 A B 0.0000
106 G B 0.0000
107 T B 0.0000
108 T B 0.0000
109 Y B 0.0000
110 Y B 0.0000
111 L B 0.0000
112 V B 0.0000
113 N B 0.0000
114 P B 0.0000
115 H B -2.0249
116 D B -2.3995
117 H B -2.5139
118 Q B -2.8661
119 N B -2.7276
120 L B 0.0000
121 K B -1.0443
122 M B 0.0000
123 I B 0.0000
124 W B 0.0000
125 L B 0.0000
126 A B 0.0000
127 I B -0.2669
128 P B 0.0000
129 V B -0.5121
130 N B 0.0000
131 K B -1.6195
132 P B -1.4332
133 G B 0.0000
134 R B -1.5881
135 Y B 0.0000
136 D B 0.0000
137 D B -0.3773
138 F B 0.0000
139 F B 0.0000
140 L B 0.0000
141 S B 0.0000
142 S B 0.0000
143 T B -1.7037
144 Q B -2.1738
145 A B -1.6378
146 Q B 0.0000
147 Q B -1.6071
148 S B 0.0000
149 Y B 0.0000
150 L B 0.0000
151 Q B -0.8954
152 G B 0.0000
153 F B 0.0000
154 S B -1.3549
155 H B -2.1922
156 N B -2.0868
157 I B 0.0000
158 L B 0.0000
159 E B -2.2546
160 T B -1.5389
161 S B 0.0000
162 F B 0.0000
163 H B -2.3557
164 S B -2.1950
165 E B -3.1628
166 F B -2.8339
167 E B -3.4997
168 E B -3.0204
169 I B 0.0000
170 N B -2.6504
171 R B -3.0414
172 V B 0.0000
173 L B 0.0000
174 F B 0.0000
175 G B -2.0103
183 Q B -1.9831
184 E B -2.4334
185 G B 0.0000
186 V B 0.0000
187 I B 0.0000
188 V B 0.0000
189 E B -2.5679
190 L B -1.5816
191 S B -2.2174
192 K B -3.6358
193 E B -3.5343
194 Q B -2.6917
195 I B 0.0000
196 R B -3.9181
197 Q B -3.0222
198 L B 0.0000
199 S B -2.5889
200 R B -3.6271
201 R B -3.5917
202 A B -2.4978
203 K B -2.7534
204 S B -1.4611
205 S B -1.4863
206 S B -2.1308
207 R B -3.0347
208 K B -2.7025
209 T B -2.2142
210 I B 0.0000
211 S B -1.9922
212 S B -2.1673
213 E B -3.3414
214 D B -3.0887
215 E B -2.4275
216 P B 0.0000
217 F B 0.0000
218 N B -1.0045
219 L B 0.0000
220 R B -1.5266
221 S B -1.7170
222 R B -2.2460
223 N B -1.8967
224 P B 0.0000
225 I B 0.2857
226 Y B 0.0000
227 S B -1.0153
228 N B -1.3615
229 N B -1.9609
230 F B -1.9781
231 G B 0.0000
232 K B -1.7381
233 F B 0.0000
234 F B 0.0000
235 E B 0.0000
236 I B 0.0000
237 T B -1.8706
238 P B 0.0000
239 E B -3.3354
240 K B -2.1716
241 N B 0.0000
242 P B -2.6840
243 Q B 0.0000
244 L B 0.0000
245 R B -3.9730
246 D B -3.0786
247 L B 0.0000
248 D B -2.7801
249 I B 0.0000
250 F B 0.0000
251 L B 0.0000
252 S B 0.0000
253 S B 0.0000
254 V B 0.0000
255 D B -1.6623
256 I B 0.0000
257 N B -3.0572
258 E B -3.2770
259 G B -2.0185
260 A B 0.0000
261 L B 0.0000
262 L B 0.0000
263 L B 0.0000
264 P B 0.0000
265 H B 0.0000
266 F B 0.0000
267 N B 0.0000
268 S B 0.0000
269 K B -0.9574
270 A B 0.0000
271 I B 0.0000
272 V B 0.0000
273 I B 0.0000
274 L B 0.0000
275 V B 0.0000
276 I B 0.0000
277 N B 0.0000
278 E B -2.6569
279 G B -2.5073
280 D B -2.4567
281 A B 0.0000
282 N B -1.4401
283 I B 0.0000
284 E B 0.0000
285 L B 0.0000
286 V B 0.0000
287 G B 0.0000
288 I B 0.0000
289 K B -2.5836
302 L B -1.1120
303 E B -2.5439
304 V B -1.6316
305 Q B -1.9581
306 R B -2.5088
307 Y B 0.0000
308 R B -2.7798
309 A B 0.0000
310 E B -2.8059
311 L B 0.0000
312 S B -2.2449
313 E B -2.7356
314 D B -1.5540
315 D B 0.0000
316 V B 0.0000
317 F B 0.0000
318 V B 0.0000
319 I B 0.0000
320 P B 0.0000
321 A B 0.0000
322 A B 0.0000
323 Y B 0.0000
324 P B 0.0000
325 F B 0.0000
326 V B 0.0000
327 V B 0.0000
328 N B -1.2270
329 A B 0.0000
330 T B -1.7297
331 S B -2.2440
332 N B -2.9916
333 L B 0.0000
334 N B -1.6549
335 F B 0.0000
336 L B 0.0000
337 A B 0.0000
338 F B 0.0000
339 G B 0.0000
340 I B 0.0000
341 N B -1.4750
342 A B 0.0000
343 E B -3.4062
344 N B -2.8108
345 N B -1.8188
346 Q B -1.5108
347 R B 0.0000
348 N B 0.0000
349 F B 0.0000
350 L B 0.0000
351 A B 0.0000
352 G B 0.0000
353 E B -3.5972
354 K B -3.2225
355 D B -2.5544
356 N B 0.0000
357 V B 0.0000
358 V B 0.0000
359 R B -2.3410
360 Q B -2.1596
361 I B 0.0000
362 E B -1.6839
363 R B -2.8408
364 Q B -2.0749
365 V B 0.0000
366 Q B 0.0000
367 E B -2.3266
368 L B 0.0000
369 A B 0.0000
370 F B 0.0000
371 P B -1.8105
372 G B 0.0000
373 S B -1.7670
374 A B -2.4426
375 Q B -2.7368
376 D B -2.6487
377 V B 0.0000
378 E B -2.9637
379 R B -3.3839
380 L B 0.0000
381 L B 0.0000
382 K B -3.8840
383 K B -3.3350
384 Q B 0.0000
385 R B -3.5197
386 E B -2.7041
387 S B -1.6503
388 Y B -0.6411
389 F B 0.0000
390 V B 0.0000
391 D B -2.4776
392 A B -1.6178
6 D C -3.7884
7 E C -3.6583
8 N C -2.9032
9 N C 0.0000
10 P C -1.2809
11 F C 0.0000
12 Y C 0.0000
13 F C 0.0000
14 R C -1.9115
15 S C -1.2629
16 S C -1.1582
17 N C -1.8974
18 S C 0.0000
19 F C -1.0284
20 Q C -1.2541
21 T C -0.9265
22 L C -0.2732
23 F C -0.9610
24 E C -2.6183
25 N C -2.5327
26 Q C -2.6621
27 N C 0.0000
28 G C -2.3282
29 R C -2.2714
30 I C 0.0000
31 R C -0.8077
32 L C -0.2532
33 L C 0.0000
34 Q C -1.5090
35 R C -2.4959
36 F C 0.0000
37 N C -2.7714
38 K C -2.9052
39 R C -2.2148
40 S C 0.0000
41 P C -1.6887
42 Q C -1.6479
43 L C 0.0000
44 E C -2.4030
45 N C -1.8571
46 L C 0.0000
47 R C -2.5563
48 D C -1.8876
49 Y C -1.0563
50 R C 0.0000
51 I C 0.0000
52 V C 0.0000
53 Q C 0.0000
54 F C 0.0000
55 Q C -1.5122
56 S C 0.0000
57 K C -3.1322
58 P C -2.8088
59 N C -1.9211
60 T C 0.0000
61 I C 0.0000
62 L C 0.0000
63 L C 0.0000
64 P C 0.0000
65 H C 0.0000
66 H C 0.0000
67 A C 0.0000
68 D C 0.0000
69 A C 0.0000
70 D C -0.1366
71 F C 0.0000
72 L C 0.0000
73 L C 0.0000
74 F C 0.0000
75 V C 0.0000
76 L C 0.0000
77 S C -0.9134
78 G C -1.7782
79 R C -1.6288
80 A C 0.0000
81 I C -0.1899
82 L C 0.0000
83 T C 0.0000
84 L C -0.8923
85 V C 0.0000
86 N C -2.4054
87 N C -2.4916
88 D C -3.7938
89 D C -3.6948
90 R C -3.1445
91 D C -2.3408
92 S C -1.0987
93 Y C -1.1002
94 N C -1.3756
95 L C 0.0000
96 H C -1.5044
97 P C -0.9372
98 G C 0.0000
99 D C -1.0204
100 A C 0.0000
101 Q C 0.0000
102 R C -0.9279
103 I C 0.0000
104 P C -0.5256
105 A C 0.0000
106 G C 0.0000
107 T C -0.3057
108 T C 0.0000
109 Y C 0.0000
110 Y C 0.0000
111 L C 0.0000
112 V C -0.0184
113 N C 0.0000
114 P C -1.0767
115 H C -2.6410
116 D C -3.4676
117 H C -3.1083
118 Q C -3.2255
119 N C -2.9530
120 L C 0.0000
121 K C -1.1294
122 M C 0.0000
123 I C 0.0000
124 W C 0.0000
125 L C 0.0000
126 A C 0.0000
127 I C -0.3275
128 P C 0.0000
129 V C -0.5331
130 N C 0.0000
131 K C -1.3393
132 P C -1.5004
133 G C 0.0000
134 R C -2.2476
135 Y C -0.9321
136 D C -0.8679
137 D C 0.0000
138 F C 0.0000
139 F C 0.0000
140 L C 0.0000
141 S C 0.0000
142 S C 0.0000
143 T C -1.9053
144 Q C -2.2971
145 A C -1.4959
146 Q C 0.0000
147 Q C -1.6679
148 S C 0.0000
149 Y C 0.0000
150 L C 0.0000
151 Q C -0.7569
152 G C 0.0000
153 F C 0.0000
154 S C -1.1079
155 H C -2.2342
156 N C -2.2265
157 I C -1.0907
158 L C 0.0000
159 E C -2.5096
160 T C -1.7483
161 S C 0.0000
162 F C 0.0000
163 H C -2.7503
164 S C -2.2894
165 E C -3.1889
166 F C -2.7157
167 E C -3.1476
168 E C -2.5331
169 I C 0.0000
170 N C -2.2824
171 R C -2.5554
172 V C 0.0000
173 L C 0.0000
174 F C 0.0000
175 G C -1.5087
183 Q C -2.6113
184 E C -3.1942
185 G C 0.0000
186 V C 0.0000
187 I C 0.0000
188 V C 0.0000
189 E C -1.8452
190 L C 0.4338
191 D C -2.7908
192 E C -2.7441
193 P C -1.7680
194 F C 0.0000
195 N C -1.3071
196 L C 0.0000
197 R C -1.8469
198 S C -1.8291
199 R C -2.7280
200 N C -2.2563
201 P C -0.9876
202 I C 0.3413
203 Y C 0.0000
204 S C -0.9161
205 N C -1.2795
206 N C -1.9297
207 F C -1.8883
208 G C -1.9527
209 K C -1.5293
210 F C 0.0000
211 F C -0.7157
212 E C -0.5496
213 I C 0.0000
214 T C -2.0357
215 P C 0.0000
216 E C -3.6334
217 K C -2.8695
218 N C -2.4129
219 P C -2.5090
220 Q C 0.0000
221 L C 0.0000
222 R C -3.9111
223 D C -2.9655
224 L C -1.8000
225 D C -2.5711
226 I C 0.0000
227 F C 0.0000
228 L C 0.0000
229 S C 0.0000
230 S C 0.0000
231 V C 0.0000
232 D C -1.9022
233 I C 0.0000
234 N C -3.0718
235 E C -3.2779
236 G C -1.9289
237 A C 0.0000
238 L C 0.0000
239 L C 0.0000
240 L C 0.0000
241 P C 0.0000
242 H C 0.0000
243 F C 0.0000
244 N C 0.0000
245 S C 0.0000
246 K C -0.8531
247 A C 0.0000
248 I C 0.0000
249 V C 0.0000
250 I C 0.0000
251 L C 0.0000
252 V C 0.0000
253 I C 0.0000
254 N C 0.0000
255 E C -2.9416
256 G C -2.5517
257 D C -2.4920
258 A C 0.0000
259 N C -1.6906
260 I C 0.0000
261 E C 0.0000
262 L C 0.0000
263 V C 0.0000
264 G C 0.0000
265 I C 0.0000
266 K C -2.4852
301 P C -0.8744
302 L C -1.1068
303 E C -2.3487
304 V C -1.8401
305 Q C -2.0906
306 R C -2.6310
307 Y C -1.9516
308 R C -2.8497
309 A C 0.0000
310 E C -2.8318
311 L C 0.0000
312 S C -2.1699
313 E C -2.7433
314 D C -1.5807
315 D C 0.0000
316 V C 0.0000
317 F C 0.0000
318 V C 0.0000
319 I C 0.0000
320 P C 0.0000
321 A C 0.0000
322 A C 0.0000
323 Y C 0.1148
324 P C 0.0000
325 F C 0.0000
326 V C 0.0000
327 V C 0.0000
328 N C -1.3136
329 A C 0.0000
330 T C -1.7094
331 S C -2.2440
332 N C -3.0213
333 L C 0.0000
334 N C 0.0000
335 F C 0.0000
336 L C 0.0000
337 A C 0.0000
338 F C 0.0000
339 G C 0.0000
340 I C 0.0000
341 N C -1.3034
342 A C 0.0000
343 E C -3.2119
344 N C -2.6271
345 N C -1.6590
346 Q C -1.0494
347 R C 0.0000
348 N C 0.0000
349 F C 0.0000
350 L C 0.0000
351 A C 0.0000
352 G C 0.0000
353 E C -3.9838
354 K C -3.5252
355 D C -2.5960
356 N C 0.0000
357 V C 0.0000
358 V C 0.0000
359 R C -2.6682
360 Q C -2.0928
361 I C 0.0000
362 E C -1.7405
363 R C -2.9100
364 Q C -1.7189
365 V C 0.0000
366 Q C 0.0000
367 E C -2.1752
368 L C 0.0000
369 A C 0.0000
370 F C 0.0000
371 P C -1.2197
372 G C -1.6006
373 S C -1.7593
374 A C -2.4581
375 Q C -2.7889
376 D C -2.8910
377 V C 0.0000
378 E C -4.2913
379 R C -3.7970
380 L C 0.0000
381 L C 0.0000
382 K C -4.2150
383 K C -3.2378
384 Q C 0.0000
385 R C -3.6712
386 E C -3.1544
387 S C -1.9747
388 Y C -0.8509
389 F C 0.0000
390 V C 0.0000
391 D C -2.1944
392 A C -1.2833
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -1.1073 1.4122 View CSV PDB
4.5 -1.1827 1.2718 View CSV PDB
5.0 -1.2779 1.171 View CSV PDB
5.5 -1.3751 1.1033 View CSV PDB
6.0 -1.4566 1.0597 View CSV PDB
6.5 -1.5102 1.0499 View CSV PDB
7.0 -1.536 1.0738 View CSV PDB
7.5 -1.5439 1.1203 View CSV PDB
8.0 -1.5431 1.1768 View CSV PDB
8.5 -1.5366 1.2363 View CSV PDB
9.0 -1.5237 1.2951 View CSV PDB