Chain sequence(s) |
A: MAAATASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSARRSMTCRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0940 | |
2 | A | A | 0.6108 | |
3 | A | A | 0.3346 | |
4 | A | A | 0.0840 | |
5 | T | A | 0.1070 | |
6 | A | A | 0.3007 | |
7 | S | A | 0.4960 | |
8 | L | A | 1.3047 | |
9 | S | A | 0.3737 | |
10 | S | A | 0.3472 | |
11 | T | A | 0.9204 | |
12 | L | A | 2.2152 | |
13 | L | A | 2.2573 | |
14 | A | A | 1.2664 | |
15 | P | A | 0.3893 | |
16 | C | A | 0.4731 | |
17 | S | A | -0.3751 | |
18 | S | A | -1.2171 | |
19 | K | A | -2.4813 | |
20 | Q | A | -2.4522 | |
21 | P | A | -1.9020 | |
22 | Q | A | -2.1102 | |
23 | P | A | -1.8253 | |
24 | Q | A | -2.5714 | |
25 | Q | A | -2.9306 | |
26 | Q | A | -2.9513 | |
27 | H | A | -2.9709 | |
28 | Q | A | -3.0431 | |
29 | H | A | -2.6793 | |
30 | Q | A | -2.5633 | |
31 | Q | A | -1.8550 | |
32 | L | A | -0.3060 | |
33 | K | A | -1.6197 | |
34 | C | A | -0.4694 | |
35 | K | A | -1.1902 | |
36 | S | A | -0.2394 | |
37 | F | A | 1.4785 | |
38 | S | A | 0.3148 | |
39 | G | A | 0.2334 | |
40 | L | A | 0.8387 | |
41 | R | A | -1.1825 | |
42 | P | A | -0.2553 | |
43 | L | A | 0.5859 | |
44 | K | A | -0.6171 | |
45 | L | A | 1.0417 | |
46 | N | A | 0.0685 | |
47 | I | A | 1.3150 | |
48 | S | A | 0.1882 | |
49 | S | A | -0.8806 | |
50 | N | A | -1.8803 | |
51 | N | A | -2.1235 | |
52 | S | A | -1.3450 | |
53 | S | A | -0.7135 | |
54 | S | A | -0.2672 | |
55 | S | A | 0.4400 | |
56 | L | A | 1.5417 | |
57 | S | A | 0.8717 | |
58 | M | A | 1.2175 | |
59 | S | A | 0.1086 | |
60 | S | A | -0.8706 | |
61 | A | A | -1.5228 | |
62 | R | A | -2.7271 | |
63 | R | A | -2.5423 | |
64 | S | A | -1.1243 | |
65 | M | A | -0.0285 | |
66 | T | A | -0.1435 | |
67 | C | A | -0.1138 | |
68 | R | A | -1.7416 | |
69 | A | A | -1.3880 | |
70 | E | A | -2.0265 | |
71 | L | A | -0.2071 | |
72 | S | A | 0.0461 | |
73 | P | A | 0.4839 | |
74 | S | A | 0.8224 | |
75 | L | A | 2.0395 | |
76 | V | A | 1.9634 | |
77 | I | A | 1.6078 | |
78 | S | A | 1.2814 | |
79 | L | A | 2.3994 | |
80 | S | A | 2.0250 | |
81 | T | A | 1.9168 | |
82 | G | A | 1.9119 | |
83 | L | A | 3.0989 | |
84 | S | A | 2.5449 | |
85 | L | A | 2.7784 | |
86 | F | A | 3.9320 | |
87 | L | A | 3.8919 | |
88 | G | A | 2.8605 | |
89 | R | A | 2.7640 | |
90 | F | A | 4.1579 | |
91 | V | A | 4.2740 | |
92 | F | A | 3.4619 | |
93 | F | A | 1.8110 | |
94 | N | A | -0.1412 | |
95 | F | A | 0.6048 | |
96 | Q | A | -1.6106 | |
97 | R | A | -2.8526 | |
98 | E | A | -3.4503 | |
99 | N | A | -2.9494 | |
100 | M | A | -1.3082 | |
101 | A | A | -1.8872 | |
102 | K | A | -2.7217 | |
103 | Q | A | -1.6636 | |
104 | V | A | -0.0265 | |
105 | P | A | -1.3278 | |
106 | E | A | -2.5000 | |
107 | Q | A | -2.6073 | |
108 | N | A | -2.4236 | |
109 | G | A | -1.6142 | |
110 | M | A | -0.4491 | |
111 | S | A | -0.6775 | |
112 | H | A | -1.0450 | |
113 | F | A | 0.2626 | |
114 | E | A | -1.4537 | |
115 | A | A | -1.2138 | |
116 | G | A | -1.7737 | |
117 | D | A | -2.8787 | |
118 | T | A | -2.0664 | |
119 | R | A | -3.2440 | |
120 | A | A | -2.2868 | |
121 | K | A | -2.7533 | |
122 | E | A | -1.3957 | |
123 | Y | A | 1.2690 | |
124 | V | A | 1.9976 | |
125 | S | A | 1.4696 | |
126 | L | A | 2.5037 | |
127 | L | A | 2.1849 | |
128 | K | A | -0.7128 | |
129 | S | A | -1.0842 | |
130 | N | A | -2.1355 | |
131 | D | A | -1.9942 | |
132 | P | A | -0.9720 | |
133 | V | A | -0.1566 | |
134 | G | A | -0.6306 | |
135 | F | A | 0.4285 | |
136 | N | A | 1.6333 | |
137 | I | A | 3.5943 | |
138 | V | A | 3.3343 | |
139 | D | A | 1.6511 | |
140 | V | A | 2.5375 | |
141 | L | A | 3.0986 | |
142 | A | A | 2.0294 | |
143 | W | A | 1.9978 | |
144 | G | A | 1.6806 | |
145 | S | A | 1.4530 | |
146 | I | A | 2.4834 | |
147 | G | A | 0.0000 | |
148 | H | A | 1.6104 | |
149 | I | A | 3.5840 | |
150 | V | A | 3.4625 | |
151 | A | A | 3.0421 | |
152 | Y | A | 3.4966 | |
153 | Y | A | 3.4564 | |
154 | I | A | 2.8579 | |
155 | L | A | 2.2345 | |
156 | A | A | 1.1226 | |
157 | T | A | 0.8253 | |
158 | A | A | 0.5812 | |
159 | S | A | -0.1956 | |
160 | N | A | -1.1797 | |
161 | G | A | -0.9860 | |
162 | Y | A | -0.3302 | |
163 | D | A | -1.3624 | |
164 | P | A | -0.0548 | |
165 | S | A | 0.8504 | |
166 | F | A | 2.4680 | |
167 | F | A | 2.7725 |