Project name: VgADm2mut

Status: done

Started: 2025-08-08 16:20:16
Chain sequence(s) A: MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTVDNSRLWQAGKEHIFHYTGRLLSGIPGLRPHFSGIGIETEVHLQVKSLEDIRLNLRQVNYTQVNGPLSPGLPHVTSSYEGSNWRYVLLPQFTQAPIDIKKLLKVPITFAIHDGEIKTITVSGTEQKWSLNFKKALVALFQTKMETSTLDNKMNTIVKDSDSTKNYWKVSEETIEGVCDVIYQVNELPEYIVKERAHYFPHLEACTSKKFYEITKTKNIDSCKKSAVYTFMKPAVKAKKCNSFKCLSNTFGSASSMTRYYACGPRSNWILQTIVNEGEIVQRPVGVKSETITTGTRQVLKLRTIQPISSEVPKPPQPRTTEKIMYEYINAGQVSRQQIGIIPKIPQSELKSGEIYKYLPRHFNPAPSSTESKQHLSATKIKAELKSYIISIIDDLSSVEELAQKEIPLRLTTFIRGMTLLKVEDIKSLYTDLKSTVYSPAHSNQEKISMFHNIFFDAVMVSGTTPAVLFLKDMIKSKEIPTYQATYLLMLLPHHIITPTKEVFTSLLEIIQSEIVISNTILYNTAILSMSNLVEKTCLDKSRQVSYPTAVFGQFCDAQSEIVTEKWIPYLTKAVQTAPTADRRNAIIMALGALKHKDIIPALLPLVEGHGPIEQGSGVAFPNISRTLSIYAIGNVRVHHPELVLPIILSVYSNPAENTQLRIAAFNMLVNMNPPMNIIQKIAAMTWSEKNTEVLKKTYTGFYTLSRSVDISNLEDTSPESTLAKKTQLVVPLMRKTSGVLQGGSGVEMVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYKGGSGVEHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:05)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:05)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:25:06)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/ace05ab7ab32230/tmp/folded.pdb                (00:25:06)
[INFO]       Main:     Simulation completed successfully.                                          (00:38:54)
Show buried residues

Minimal score value
-4.3029
Maximal score value
2.9229
Average score
-0.7819
Total score value
-855.402

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.3108
2 S A -1.1766
3 D A -2.7231
4 Q A -3.1195
5 E A -3.4428
6 A A -2.3711
7 K A -2.5457
8 P A -1.6999
9 S A -1.6289
10 T A -1.6472
11 E A -2.4843
12 D A -2.4487
13 L A -0.7753
14 G A -2.2847
15 D A -3.6244
16 K A -3.9181
17 K A -4.3029
18 E A -3.8263
19 G A -2.3658
20 E A -2.7252
21 Y A -1.5891
22 I A 0.0000
23 K A -2.8737
24 L A 0.0000
25 K A -1.9638
26 V A 0.0000
27 I A -1.2302
28 G A 0.0000
29 Q A -2.3856
30 D A -2.5598
31 S A -1.8882
32 S A -1.6892
33 E A -2.2581
34 I A -1.1252
35 H A -1.9278
36 F A -1.6855
37 K A -2.4921
38 V A 0.0000
39 K A -1.6209
40 M A -2.1117
41 T A -1.4801
42 T A -1.2905
43 H A -2.3567
44 L A 0.0000
45 K A -2.8092
46 K A -3.0791
47 L A 0.0000
48 K A 0.0000
49 E A -3.3591
50 S A -2.4694
51 Y A 0.0000
52 C A 0.0000
53 Q A -2.7813
54 R A -2.9491
55 Q A -2.0427
56 G A -1.4567
57 V A -0.9119
58 P A -0.8480
59 M A -1.3414
60 N A -1.7131
61 S A -1.3476
62 L A -1.3035
63 R A -2.1146
64 F A 0.0000
65 L A 0.0000
66 F A 0.0000
67 E A -2.7021
68 G A -2.4982
69 Q A -3.0231
70 R A -3.1447
71 I A 0.0000
72 A A -1.6552
73 D A -2.3876
74 N A -2.4152
75 H A -2.1646
76 T A -2.0463
77 P A 0.0000
78 K A -3.1365
79 E A -2.8135
80 L A -1.9276
81 G A -1.9105
82 M A 0.0000
83 E A -3.2849
84 E A -3.5120
85 E A -3.5081
86 D A -2.4364
87 V A -1.1325
88 I A 0.0000
89 E A -1.7916
90 V A 0.0000
91 Y A -1.4880
92 Q A -2.2046
93 E A -2.3623
94 Q A -2.4961
95 T A -1.7221
96 G A -1.7259
97 G A -1.4592
98 H A -1.7809
99 S A -1.3337
100 T A -1.6262
101 V A 0.0000
102 D A -2.1333
103 N A 0.0000
104 S A -1.1687
105 R A -1.2541
106 L A 0.0000
107 W A 0.0000
108 Q A -0.8662
109 A A -0.8685
110 G A -1.1163
111 K A -1.0709
112 E A 0.0000
113 H A 0.0000
114 I A 0.0000
115 F A 0.0000
116 H A -1.4351
117 Y A 0.0000
118 T A -0.5132
119 G A 0.0000
120 R A 0.0055
121 L A 0.5593
122 L A 0.0000
123 S A 0.1159
124 G A 0.0000
125 I A 0.0655
126 P A -0.2752
127 G A -0.2536
128 L A 0.1511
129 R A -1.5110
130 P A -1.1148
131 H A -1.5628
132 F A 0.0000
133 S A -0.9192
134 G A -0.3379
135 I A -0.0111
136 G A 0.0000
137 I A 0.0000
138 E A -0.9310
139 T A 0.0000
140 E A -1.4969
141 V A 0.0000
142 H A -0.5102
143 L A 0.0000
144 Q A 0.0000
145 V A 0.0000
146 K A -1.9218
147 S A -1.3762
148 L A -1.5005
149 E A -2.3011
150 D A -1.6736
151 I A 0.0000
152 R A 0.0000
153 L A 0.0000
154 N A 0.0000
155 L A 0.0000
156 R A -2.2925
157 Q A -2.3407
158 V A 0.0000
159 N A -1.3370
160 Y A -0.7288
161 T A 0.0000
162 Q A -1.3076
163 V A 0.0000
164 N A -1.8298
165 G A -1.5227
166 P A -1.4029
167 L A 0.0000
168 S A 0.0915
169 P A 0.3284
170 G A 0.6653
171 L A 0.6086
172 P A -0.3172
173 H A -0.7380
174 V A 0.0006
175 T A -0.1518
176 S A -0.1456
177 S A 0.0773
178 Y A 0.1889
179 E A 0.0000
180 G A 0.0000
181 S A -0.1161
182 N A 0.0328
183 W A 0.0000
184 R A 0.0000
185 Y A 0.6353
186 V A 0.0000
187 L A 1.4070
188 L A 0.4965
189 P A -0.2692
190 Q A -0.9957
191 F A -0.5472
192 T A -0.9345
193 Q A -1.3100
194 A A 0.0000
195 P A -0.2963
196 I A 0.4251
197 D A -1.4409
198 I A -0.8463
199 K A -1.6439
200 K A -2.1282
201 L A -1.1654
202 L A 0.0000
203 K A -2.0387
204 V A -0.9664
205 P A 0.0000
206 I A 0.0000
207 T A 0.0000
208 F A 0.0000
209 A A 0.0000
210 I A 0.0000
211 H A -2.5021
212 D A -2.9136
213 G A 0.0000
214 E A -1.7957
215 I A 0.0000
216 K A -2.4836
217 T A -1.9615
218 I A 0.0000
219 T A -1.4244
220 V A 0.0000
221 S A 0.0000
222 G A -1.7913
223 T A -1.1834
224 E A -1.2377
225 Q A -1.3120
226 K A -0.6038
227 W A 0.2310
228 S A 0.0000
229 L A 0.0000
230 N A -0.0928
231 F A 0.2502
232 K A 0.0000
233 K A 0.0000
234 A A 0.0000
235 L A 0.0000
236 V A 0.0000
237 A A 0.0004
238 L A 0.0000
239 F A 0.0000
240 Q A 0.0000
241 T A 0.0000
242 K A -1.2847
243 M A 0.0000
244 E A -1.1604
245 T A 0.0000
246 S A -1.3034
247 T A 0.0000
248 L A 0.0000
249 D A -2.5212
250 N A 0.0000
251 K A -2.2999
252 M A -0.9966
253 N A -0.8624
254 T A -1.1935
255 I A 0.0000
256 V A 0.0000
257 K A -2.2335
258 D A -2.8297
259 S A -2.2313
260 D A -2.7203
261 S A -1.8387
262 T A -1.9230
263 K A -2.2027
264 N A 0.0000
265 Y A 0.0000
266 W A 0.0000
267 K A -1.8980
268 V A -0.9509
269 S A -0.7326
270 E A 0.0000
271 E A -1.1212
272 T A 0.0000
273 I A -0.0888
274 E A -0.2634
275 G A 0.0000
276 V A -0.8747
277 C A 0.0000
278 D A -1.3175
279 V A 0.0000
280 I A 0.0000
281 Y A 0.0000
282 Q A 0.0000
283 V A 0.0000
284 N A 0.0000
285 E A -1.2080
286 L A 0.0000
287 P A -1.2877
288 E A -2.3785
289 Y A -0.6013
290 I A 0.0000
291 V A 0.0000
292 K A -2.6119
293 E A -2.8112
294 R A 0.0000
295 A A -1.4411
296 H A -1.2198
297 Y A -0.6724
298 F A 0.0000
299 P A -0.8874
300 H A -0.9457
301 L A -1.1242
302 E A -1.9272
303 A A -0.9274
304 C A 0.0000
305 T A -1.1589
306 S A -1.3949
307 K A -2.7188
308 K A -2.3559
309 F A 0.0000
310 Y A 0.0000
311 E A 0.0000
312 I A 0.0000
313 T A 0.0000
314 K A 0.0000
315 T A 0.0000
316 K A 0.0000
317 N A -0.2503
318 I A -0.2750
319 D A 0.0000
320 S A -0.8606
321 C A 0.0000
322 K A -2.4646
323 K A -2.2914
324 S A -0.4582
325 A A 0.6029
326 V A 2.5158
327 Y A 2.7809
328 T A 2.0747
329 F A 2.1781
330 M A 0.5237
331 K A -0.8565
332 P A -0.8108
333 A A 0.1239
334 V A 0.3978
335 K A -1.5961
336 A A -1.7688
337 K A -2.8631
338 K A -3.0608
339 C A -1.9345
340 N A -1.9105
341 S A -0.9514
342 F A -0.1522
343 K A -0.8351
344 C A -0.6627
345 L A -0.1346
346 S A 0.0000
347 N A -0.6635
348 T A -0.3979
349 F A 0.0884
350 G A 0.0000
351 S A 0.0000
352 A A 0.2638
353 S A 0.0000
354 S A 0.0000
355 M A 0.0000
356 T A 0.0000
357 R A 0.0000
358 Y A 0.0000
359 Y A 0.0000
360 A A 0.0000
361 C A 0.0000
362 G A 0.0000
363 P A -1.4440
364 R A -1.4996
365 S A -1.1639
366 N A -1.2732
367 W A 0.0000
368 I A 0.0029
369 L A 0.0000
370 Q A 0.0000
371 T A 0.0000
372 I A 0.0000
373 V A 0.0000
374 N A 0.0000
375 E A -0.3856
376 G A 0.0405
377 E A 0.0000
378 I A 0.8337
379 V A 0.0000
380 Q A -0.0829
381 R A -0.3356
382 P A 0.3086
383 V A 1.3790
384 G A 0.5879
385 V A 0.8125
386 K A -1.2172
387 S A -0.7208
388 E A -0.7342
389 T A -0.1802
390 I A 0.3493
391 T A 0.0000
392 T A 0.5230
393 G A 0.0000
394 T A 0.1350
395 R A -0.3275
396 Q A 0.0000
397 V A 0.0000
398 L A 0.0000
399 K A -1.1956
400 L A 0.0000
401 R A -1.6128
402 T A -0.6822
403 I A -0.0612
404 Q A -0.6098
405 P A -0.6332
406 I A -0.8705
407 S A -0.8444
408 S A -1.1687
409 E A -2.3184
410 V A 0.0000
411 P A -1.5909
412 K A -2.2897
413 P A 0.0000
414 P A -1.6244
415 Q A -2.2201
416 P A -2.1969
417 R A -2.4497
418 T A -1.6598
419 T A -1.9596
420 E A -2.8039
421 K A -2.4915
422 I A 0.0000
423 M A -0.6896
424 Y A 0.4031
425 E A -0.1271
426 Y A 1.4621
427 I A 1.5842
428 N A -0.4495
429 A A -0.0788
430 G A -0.6277
431 Q A -1.1411
432 V A 0.1952
433 S A -1.0347
434 R A -2.1242
435 Q A -2.0136
436 Q A -0.9830
437 I A 1.2461
438 G A 1.4507
439 I A 2.7676
440 I A 2.9229
441 P A 0.9277
442 K A -0.3053
443 I A 0.7834
444 P A -0.5628
445 Q A -1.5285
446 S A -1.4281
447 E A -1.9668
448 L A -0.8368
449 K A -1.9593
450 S A -0.9972
451 G A -0.8420
452 E A -0.4772
453 I A 1.7798
454 Y A 1.7860
455 K A 0.2298
456 Y A 1.6202
457 L A 1.6296
458 P A -0.1576
459 R A -1.4464
460 H A -1.2502
461 F A 0.1528
462 N A -1.0820
463 P A -0.5210
464 A A -0.3457
465 P A -0.6849
466 S A -0.7856
467 S A -1.0511
468 T A -1.5107
469 E A -2.6977
470 S A -2.5267
471 K A -3.0578
472 Q A -2.6957
473 H A -1.9741
474 L A -0.8311
475 S A -0.8288
476 A A -0.7641
477 T A -1.0035
478 K A -1.9124
479 I A 0.0000
480 K A -1.3162
481 A A -1.6087
482 E A -1.9528
483 L A 0.0000
484 K A -1.2765
485 S A -0.6278
486 Y A -0.1357
487 I A 0.0000
488 I A -0.1370
489 S A -0.5384
490 I A 0.0000
491 I A 0.0000
492 D A -1.8372
493 D A -1.2538
494 L A -0.1899
495 S A -0.7557
496 S A -0.4038
497 V A 0.6093
498 E A -1.8522
499 E A -2.5489
500 L A -0.9872
501 A A -1.3231
502 Q A -2.3336
503 K A -1.7895
504 E A -1.6292
505 I A 0.0000
506 P A 0.0391
507 L A 0.9115
508 R A 0.0599
509 L A 0.2778
510 T A 0.1314
511 T A -0.1979
512 F A 0.0000
513 I A -0.2195
514 R A -1.3825
515 G A -0.5711
516 M A 0.0000
517 T A 0.0967
518 L A 0.8329
519 L A 0.0000
520 K A -1.9695
521 V A -1.7520
522 E A -2.5700
523 D A -1.7525
524 I A 0.0000
525 K A -1.8891
526 S A -1.6585
527 L A 0.0000
528 Y A 0.0000
529 T A -1.3015
530 D A -1.9825
531 L A 0.0000
532 K A -0.9504
533 S A -0.8560
534 T A -0.6157
535 V A 0.0000
536 Y A -0.1379
537 S A -0.2311
538 P A -0.4480
539 A A -0.4081
540 H A -1.3520
541 S A -1.3812
542 N A -2.4682
543 Q A -2.6301
544 E A -2.9039
545 K A -2.0645
546 I A -1.3279
547 S A -1.2834
548 M A -1.0263
549 F A 0.0000
550 H A -0.6404
551 N A -0.8352
552 I A -0.3007
553 F A 0.0000
554 F A 0.0000
555 D A -0.5081
556 A A 0.0000
557 V A 0.0000
558 M A 0.0000
559 V A 0.0576
560 S A 0.0000
561 G A 0.0000
562 T A 0.0000
563 T A -0.5190
564 P A -0.7657
565 A A 0.0000
566 V A 0.0000
567 L A -0.4683
568 F A 0.0000
569 L A 0.0000
570 K A 0.0000
571 D A -1.5293
572 M A -1.3014
573 I A 0.0000
574 K A -2.1864
575 S A -1.7590
576 K A -2.3991
577 E A -1.7081
578 I A 0.0000
579 P A -0.2763
580 T A 0.5645
581 Y A 1.7645
582 Q A 0.0000
583 A A 0.0000
584 T A 1.4333
585 Y A 1.4848
586 L A 0.0000
587 L A 0.0000
588 M A 1.0106
589 L A 0.4606
590 L A 0.0000
591 P A 0.0000
592 H A -0.7952
593 H A -0.2047
594 I A 0.0000
595 I A 1.0890
596 T A 0.5409
597 P A 0.0000
598 T A -1.0064
599 K A -2.5039
600 E A -2.3827
601 V A 0.0000
602 F A 0.0000
603 T A -1.3298
604 S A 0.0000
605 L A 0.0000
606 L A -0.7694
607 E A -1.5862
608 I A 0.0000
609 I A 0.0000
610 Q A -1.1914
611 S A 0.0000
612 E A -1.8686
613 I A -1.1099
614 V A 0.0000
615 I A 0.2395
616 S A -0.1008
617 N A 0.2358
618 T A 0.6191
619 I A 1.8930
620 L A 0.0000
621 Y A 0.0000
622 N A 0.5776
623 T A 0.9643
624 A A 0.0000
625 I A 0.0000
626 L A 0.5078
627 S A 0.0000
628 M A 0.0000
629 S A 0.0000
630 N A -0.4928
631 L A 0.0000
632 V A 0.0000
633 E A 0.0000
634 K A -1.5392
635 T A 0.0000
636 C A 0.0000
637 L A 0.0000
638 D A -2.0134
639 K A -2.2264
640 S A -1.3721
641 R A -1.7337
642 Q A -1.4133
643 V A 0.6396
644 S A -0.1025
645 Y A 0.0000
646 P A 1.0369
647 T A 0.6704
648 A A 1.1812
649 V A 2.4811
650 F A 2.4220
651 G A 0.4985
652 Q A -1.0220
653 F A -0.7157
654 C A 0.0000
655 D A -1.7510
656 A A -1.5563
657 Q A -2.1421
658 S A -2.1412
659 E A -3.2934
660 I A 0.0000
661 V A 0.0000
662 T A -2.5017
663 E A -3.1353
664 K A -2.2715
665 W A 0.0000
666 I A 0.0000
667 P A -1.5009
668 Y A -1.0348
669 L A 0.0000
670 T A -1.2936
671 K A -2.0783
672 A A 0.0000
673 V A 0.0000
674 Q A -1.6697
675 T A -1.2103
676 A A -1.2244
677 P A -0.9613
678 T A -0.9892
679 A A -0.8427
680 D A -1.6563
681 R A 0.0000
682 R A 0.0000
683 N A -0.3635
684 A A 0.0000
685 I A 0.0000
686 I A 0.0000
687 M A 0.6877
688 A A 0.0000
689 L A 0.0000
690 G A 0.0000
691 A A -0.0181
692 L A 0.0000
693 K A -0.8604
694 H A 0.0000
695 K A -1.6985
696 D A -2.1037
697 I A 0.0000
698 I A 0.0000
699 P A -1.1825
700 A A 0.0000
701 L A 0.0000
702 L A 0.0000
703 P A -0.7041
704 L A 0.0000
705 V A 0.0000
706 E A -0.8206
707 G A -0.8324
708 H A -0.9655
709 G A 0.0000
710 P A -0.7710
711 I A -0.1387
712 E A -1.7667
713 Q A -1.8612
714 G A -1.2524
715 S A -0.6280
716 G A -0.1131
717 V A 1.2437
718 A A 0.4894
719 F A 0.0000
720 P A 0.2692
721 N A -0.7796
722 I A 0.8800
723 S A 0.0000
724 R A -0.3469
725 T A 0.0000
726 L A 0.7187
727 S A 0.0000
728 I A 0.0000
729 Y A 0.5486
730 A A 0.0000
731 I A 0.0000
732 G A 0.0000
733 N A -0.3937
734 V A 0.0000
735 R A -0.7995
736 V A 0.1393
737 H A -0.7300
738 H A -0.9259
739 P A -1.0542
740 E A -1.7779
741 L A -1.0800
742 V A 0.0000
743 L A -0.4141
744 P A -0.5267
745 I A 0.0000
746 I A 0.0000
747 L A 0.0000
748 S A 0.0000
749 V A 0.0000
750 Y A 0.0000
751 S A 0.0000
752 N A -0.2702
753 P A -0.5587
754 A A -0.1112
755 E A 0.0000
756 N A -1.1963
757 T A -1.3203
758 Q A -1.4415
759 L A 0.0000
760 R A 0.0000
761 I A -0.7242
762 A A 0.0000
763 A A 0.0000
764 F A 0.0000
765 N A -0.7730
766 M A 0.0000
767 L A 0.0000
768 V A -0.6347
769 N A -1.6884
770 M A -0.7031
771 N A -1.0630
772 P A 0.0000
773 P A -0.1821
774 M A -0.2855
775 N A 0.0000
776 I A 0.0000
777 I A 0.0000
778 Q A 0.0000
779 K A 0.0000
780 I A 0.0000
781 A A 0.0000
782 A A -0.0674
783 M A 0.0000
784 T A 0.0000
785 W A 0.0000
786 S A -0.5258
787 E A 0.0000
788 K A -2.1600
789 N A -1.7356
790 T A -1.7405
791 E A -2.3845
792 V A 0.0000
793 L A 0.0000
794 K A -2.2007
795 K A -1.5096
796 T A 0.0000
797 Y A 0.0000
798 T A -0.4006
799 G A -0.3778
800 F A 0.0000
801 Y A -0.5428
802 T A -0.4938
803 L A -0.7137
804 S A 0.0000
805 R A -2.1425
806 S A -1.4945
807 V A -1.4245
808 D A -1.7926
809 I A -0.5588
810 S A -0.6005
811 N A -1.0872
812 L A -0.0102
813 E A -1.5854
814 D A -1.4217
815 T A -1.0583
816 S A -1.2167
817 P A -1.4946
818 E A -2.2654
819 S A 0.0000
820 T A -0.8845
821 L A 0.0000
822 A A 0.0000
823 K A -0.9255
824 K A -0.7344
825 T A 0.0000
826 Q A -0.5814
827 L A 0.0000
828 V A 0.0000
829 V A -0.0927
830 P A -0.1835
831 L A 0.0000
832 M A 0.0000
833 R A -0.8603
834 K A -1.2230
835 T A -1.0246
836 S A -0.7236
837 G A -0.5737
838 V A -0.1217
839 L A 0.5746
840 Q A -0.6572
841 G A -1.0638
842 G A -0.8317
843 S A -0.6526
844 G A -0.3962
845 V A 0.7780
846 E A -0.4279
847 M A 0.3497
848 V A -0.4142
849 S A -1.5907
850 K A -2.9074
851 G A -2.6522
852 E A -2.3700
853 E A -3.1858
854 D A -3.1451
855 N A 0.0000
856 M A -1.3963
857 A A -1.3002
858 I A -0.7322
859 I A 0.0000
860 K A -2.0780
861 E A -2.2322
862 F A -1.1555
863 M A 0.0000
864 R A -3.0203
865 F A 0.0000
866 K A -3.0543
867 V A 0.0000
868 H A -2.7948
869 M A 0.0000
870 E A -3.7763
871 G A 0.0000
872 S A -2.5681
873 V A 0.0000
874 N A -1.8670
875 G A -1.8491
876 H A -1.9214
877 E A -3.2790
878 F A 0.0000
879 E A -3.2249
880 I A 0.0000
881 E A -3.3915
882 G A 0.0000
883 E A -3.5986
884 G A 0.0000
885 E A -2.2280
886 G A 0.0000
887 R A -2.1104
888 P A 0.0000
889 Y A -1.4541
890 E A -2.4594
891 G A 0.0000
892 T A -1.2019
893 Q A 0.0000
894 T A -1.3052
895 A A 0.0000
896 K A -2.3102
897 L A 0.0000
898 K A -2.1222
899 V A 0.0000
900 T A -1.9978
901 K A -3.0735
902 G A -2.0135
903 G A -1.6119
904 P A -1.0534
905 L A 0.0000
906 P A -0.7922
907 F A 0.0000
908 A A 0.0000
909 W A 0.0000
910 D A 0.0000
911 I A 0.0000
912 L A 0.0000
913 S A 0.0000
914 P A 0.0000
915 Q A 0.0000
916 F A 0.0000
917 M A 0.0000
918 Y A 0.0000
919 G A 0.0000
920 S A 0.0000
921 K A 0.0000
922 A A 0.0000
923 Y A 0.0000
924 V A 0.0000
925 K A -1.7188
926 H A -1.1806
927 P A -0.8613
928 A A -0.5747
929 D A -1.2374
930 I A 0.0000
931 P A -0.5844
932 D A -0.4539
933 Y A 0.0000
934 L A 0.0000
935 K A 0.0000
936 L A -0.4625
937 S A 0.0000
938 F A 0.0000
939 P A -0.9558
940 E A -1.7820
941 G A 0.0000
942 F A 0.0000
943 K A -2.1683
944 W A 0.0000
945 E A -2.4571
946 R A 0.0000
947 V A -0.8156
948 M A 0.0000
949 N A -1.7996
950 F A 0.0000
951 E A -2.6847
952 D A -2.0028
953 G A -1.5097
954 G A 0.0000
955 V A -0.9311
956 V A 0.0000
957 T A -1.0806
958 V A 0.0000
959 T A -1.9283
960 Q A 0.0000
961 D A -2.0943
962 S A 0.0000
963 S A -1.2871
964 L A -1.3871
965 Q A -2.5211
966 D A -2.6956
967 G A -2.3671
968 E A -2.4108
969 F A 0.0000
970 I A 0.0000
971 Y A 0.0000
972 K A -2.9640
973 V A 0.0000
974 K A -3.0280
975 L A 0.0000
976 R A -2.6944
977 G A 0.0000
978 T A -1.3698
979 N A -1.5941
980 F A 0.0000
981 P A -1.4889
982 S A -1.5694
983 D A -2.3327
984 G A -1.7083
985 P A -1.7345
986 V A 0.0000
987 M A -1.4702
988 Q A -2.3722
989 K A -2.1419
990 K A -2.1606
991 T A -1.4513
992 M A -0.6350
993 G A -0.7374
994 W A 0.0000
995 E A -1.7849
996 A A -0.8860
997 S A 0.0000
998 S A -1.1084
999 E A 0.0000
1000 R A -2.1097
1001 M A 0.0000
1002 Y A -0.9318
1003 P A -1.4141
1004 E A -2.5930
1005 D A -2.9294
1006 G A -2.1424
1007 A A 0.0000
1008 L A 0.0000
1009 K A -2.0401
1010 G A 0.0000
1011 E A -2.3228
1012 I A 0.0000
1013 K A -2.9761
1014 Q A 0.0000
1015 R A -2.4330
1016 L A 0.0000
1017 K A -1.9073
1018 L A -2.1468
1019 K A -2.9980
1020 D A -3.0247
1021 G A -2.0787
1022 G A -1.8672
1023 H A -1.9255
1024 Y A 0.0000
1025 D A -2.4736
1026 A A 0.0000
1027 E A -3.0245
1028 V A 0.0000
1029 K A -2.3245
1030 T A 0.0000
1031 T A -1.8182
1032 Y A 0.0000
1033 K A -1.9753
1034 A A 0.0000
1035 K A -1.6752
1036 K A -1.3072
1037 P A -0.7617
1038 V A -0.5492
1039 Q A -0.9788
1040 L A -0.6709
1041 P A 0.0000
1042 G A -0.7960
1043 A A -0.7838
1044 Y A 0.0000
1045 N A -1.3998
1046 V A 0.0000
1047 N A 0.0000
1048 I A 0.0000
1049 K A -1.0395
1050 L A 0.0000
1051 D A -1.8191
1052 I A -0.6599
1053 T A -0.7891
1054 S A -0.9196
1055 H A -1.3259
1056 N A -1.4532
1057 E A -2.3541
1058 D A -1.7751
1059 Y A -0.8390
1060 T A -0.8120
1061 I A -0.5291
1062 V A 0.0000
1063 E A -1.3694
1064 Q A 0.0000
1065 Y A -0.7606
1066 E A 0.0000
1067 R A -1.6532
1068 A A 0.0000
1069 E A -1.4591
1070 G A 0.0000
1071 R A -1.3808
1072 H A -1.4902
1073 S A -1.0530
1074 T A -0.6699
1075 G A -1.2847
1076 G A -1.4652
1077 M A -1.3138
1078 D A -2.6831
1079 E A -2.9300
1080 L A -1.5529
1081 Y A -0.7905
1082 K A -2.4561
1083 G A -1.6175
1084 G A -0.8761
1085 S A -0.8928
1086 G A -0.9085
1087 V A -0.0039
1088 E A -2.0976
1089 H A -2.4365
1090 H A -2.7592
1091 H A -3.0362
1092 H A -2.7425
1093 H A -2.4385
1094 H A -1.9370
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.7009 5.1949 View CSV PDB
4.5 -0.7703 5.1949 View CSV PDB
5.0 -0.8535 5.1949 View CSV PDB
5.5 -0.932 5.2052 View CSV PDB
6.0 -0.9858 5.2702 View CSV PDB
6.5 -1.002 5.3646 View CSV PDB
7.0 -0.9837 5.4754 View CSV PDB
7.5 -0.9447 5.5926 View CSV PDB
8.0 -0.8956 5.7118 View CSV PDB
8.5 -0.8396 5.831 View CSV PDB
9.0 -0.7769 5.9481 View CSV PDB