Project name: case_study_7XAD

Status: done

Started: 2026-04-08 06:31:10
Chain sequence(s) C: NLLTSYEGSFKIQLILAKLELAKAPSQPLSQRNEELKRVEQRQDRLFDLLDQMDVEVNNSIGDASERATYKAKLREWKKTIQSDIKRPLQSLVDSG
input PDB
Selected Chain(s) C
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:14)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:14)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with C chain(s) selected             (00:00:14)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:14)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:14)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:03:10)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:11)
Show buried residues

Minimal score value
-3.7584
Maximal score value
1.8041
Average score
-1.314
Total score value
-126.1463

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
4 N C -0.7266
5 L C 0.4038
6 L C 0.0000
7 T C -0.4309
8 S C -0.3213
9 Y C -0.3506
10 E C -0.8003
11 G C -0.7000
12 S C -0.4437
13 F C 0.0000
14 K C -0.4209
15 I C 1.4208
16 Q C 0.4605
17 L C 0.0000
18 I C 1.8041
19 L C 1.5030
20 A C 0.0000
21 K C 0.0383
22 L C 1.2040
23 E C 0.0000
24 L C 0.0000
25 A C -0.3412
26 K C -1.3343
27 A C 0.0000
28 P C -0.6752
29 S C -0.8010
30 Q C -1.0504
31 P C -0.5074
32 L C 0.0607
33 S C -0.9785
34 Q C -1.9547
35 R C -2.4104
36 N C -2.5493
37 E C -3.5726
38 E C 0.0000
39 L C -2.3768
40 K C -3.5879
41 R C -3.3100
42 V C 0.0000
43 E C -3.7386
44 Q C -3.5683
45 R C -2.9662
46 Q C 0.0000
47 D C -3.5906
48 R C -3.3886
49 L C 0.0000
50 F C -2.2735
51 D C -3.3186
52 L C 0.0000
53 L C 0.0000
54 D C -2.7257
55 Q C -1.6274
56 M C 0.0000
57 D C -1.7356
58 V C -0.3584
59 E C -0.6179
60 V C 0.0000
61 N C -2.3789
62 N C -1.4069
63 S C -0.5544
64 I C 0.3655
65 G C -1.6905
66 D C -2.9839
67 A C -2.5885
68 S C -2.3103
69 E C -3.4296
70 R C -3.5216
71 A C -1.8916
72 T C -1.7284
73 Y C -1.8696
74 K C -2.2190
75 A C -2.1089
76 K C -2.2075
77 L C 0.0000
78 R C -3.6887
79 E C -3.7584
80 W C -2.7406
81 K C -3.2426
82 K C -3.5413
83 T C -2.3765
84 I C 0.0000
85 Q C -2.8260
86 S C -2.2003
87 D C -1.9930
88 I C 0.0000
89 K C -3.1520
90 R C -3.1802
91 P C -1.8109
92 L C 0.0000
93 Q C -1.9245
94 S C -1.3176
95 L C -0.3353
96 V C 0.0244
97 D C -1.4556
98 S C -0.8778
99 G C -0.5671
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