| Chain sequence(s) |
A: LNGTLMQYFEWYMPNDGQHWKRLQNDSAYLAEHGITAVWIPPAYKGTSQADVGYGAYDLYDLGEFHQKGTVRTKYGTKGELQSAIKSLHSRDINVYGDVVINHKGGADATEDVTAVEVDPADRNRVISGEHLIKAWTHFHFPGRGSTYSDFKWHWYHFDGTDWDESRKLNRIYKFQGKAWDWEVSNEFGNYDYLMYADIDYDHPDVAAEIKRWGTWYANELQLDGFRLDAVKHIKFSFLRDWVNHVREKTGKEMFTVAEYWSYDLGALENYLNKTNFNHSVFDVPLHYQFHAASTQGGGYDMRKLLNGTVVSKHPLKSVTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQYAYGAQHDYFDHHDIVGWTREGDSSVANSGLAALITDGPGGAKRMYVGRQNAGETWHDITGNRSEPVVINSAGWGEFHVNGGSVSIYVQR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| pH calculations | Yes |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:01)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:01)
[INFO] PDB-Info: The input structure is globular. Max score is recommended for pH analysis. (00:00:03)
[INFO] FoldX: Starting FoldX energy minimization (00:00:03)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:05:04)
[INFO] agg3D: Running pKa-ANI on
/STORAGE/DATA/lcbio/aggreskan/b203f77f222baa1/tmp/folded.pdb (00:05:04)
[INFO] Main: Simulation completed successfully. (00:10:04)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 3 | L | A | 1.2897 | |
| 4 | N | A | 0.1287 | |
| 5 | G | A | 0.0816 | |
| 6 | T | A | 0.0000 | |
| 7 | L | A | 0.0000 | |
| 8 | M | A | 0.0000 | |
| 9 | Q | A | 0.0000 | |
| 10 | Y | A | 0.0000 | |
| 11 | F | A | 0.0000 | |
| 12 | E | A | 0.0000 | |
| 13 | W | A | 0.3355 | |
| 14 | Y | A | -0.2840 | |
| 15 | M | A | 0.0000 | |
| 16 | P | A | -1.0044 | |
| 17 | N | A | -1.5896 | |
| 18 | D | A | -2.2747 | |
| 19 | G | A | 0.0000 | |
| 20 | Q | A | -1.6431 | |
| 21 | H | A | 0.0000 | |
| 22 | W | A | 0.0000 | |
| 23 | K | A | -2.0790 | |
| 24 | R | A | -1.8987 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -1.9271 | |
| 27 | N | A | -1.9298 | |
| 28 | D | A | -1.0852 | |
| 29 | S | A | 0.0000 | |
| 30 | A | A | -1.1579 | |
| 31 | Y | A | -0.4694 | |
| 32 | L | A | 0.0000 | |
| 33 | A | A | -1.5928 | |
| 34 | E | A | -1.9654 | |
| 35 | H | A | 0.0000 | |
| 36 | G | A | 0.0000 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -1.0778 | |
| 39 | A | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | I | A | 0.0000 | |
| 43 | P | A | 0.0000 | |
| 44 | P | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | Y | A | 0.0000 | |
| 47 | K | A | 0.0000 | |
| 48 | G | A | 0.0000 | |
| 49 | T | A | -0.7323 | |
| 50 | S | A | -0.8714 | |
| 51 | Q | A | -1.3040 | |
| 52 | A | A | -0.8280 | |
| 53 | D | A | -0.5999 | |
| 54 | V | A | 0.0413 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.1401 | |
| 57 | G | A | 0.1151 | |
| 58 | A | A | 0.0000 | |
| 59 | Y | A | 0.0000 | |
| 60 | D | A | 0.0000 | |
| 61 | L | A | 0.2164 | |
| 62 | Y | A | 0.0000 | |
| 63 | D | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | E | A | -1.0047 | |
| 67 | F | A | -0.6799 | |
| 68 | H | A | -1.1945 | |
| 69 | Q | A | 0.0000 | |
| 70 | K | A | -1.2112 | |
| 71 | G | A | -1.0668 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | -0.5145 | |
| 74 | R | A | -0.8071 | |
| 75 | T | A | 0.0000 | |
| 76 | K | A | -1.1205 | |
| 77 | Y | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | T | A | -0.7808 | |
| 80 | K | A | -0.8498 | |
| 81 | G | A | -1.1376 | |
| 82 | E | A | -1.2086 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.5079 | |
| 85 | S | A | -1.3744 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | K | A | -2.7766 | |
| 89 | S | A | -2.2413 | |
| 90 | L | A | 0.0000 | |
| 91 | H | A | -2.9319 | |
| 92 | S | A | -2.4335 | |
| 93 | R | A | -3.4933 | |
| 94 | D | A | -3.3057 | |
| 95 | I | A | 0.0000 | |
| 96 | N | A | -1.5785 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | D | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | V | A | 0.0890 | |
| 103 | I | A | 0.0000 | |
| 104 | N | A | 0.0000 | |
| 105 | H | A | 0.0000 | |
| 106 | K | A | 0.0000 | |
| 107 | G | A | 0.1731 | |
| 108 | G | A | -0.3571 | |
| 109 | A | A | -0.5054 | |
| 110 | D | A | -1.0402 | |
| 111 | A | A | -0.7073 | |
| 112 | T | A | -1.0039 | |
| 113 | E | A | -1.5374 | |
| 114 | D | A | -2.0203 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -1.0173 | |
| 117 | A | A | 0.0000 | |
| 118 | V | A | -0.7947 | |
| 119 | E | A | -0.8671 | |
| 120 | V | A | 0.0000 | |
| 121 | D | A | -1.2046 | |
| 122 | P | A | -1.3212 | |
| 123 | A | A | -1.0657 | |
| 124 | D | A | -1.7897 | |
| 125 | R | A | -1.9502 | |
| 126 | N | A | -2.0840 | |
| 127 | R | A | -2.0389 | |
| 128 | V | A | 0.1271 | |
| 129 | I | A | 1.2143 | |
| 130 | S | A | -0.0523 | |
| 131 | G | A | -1.1191 | |
| 132 | E | A | -2.3066 | |
| 133 | H | A | -1.5013 | |
| 134 | L | A | -0.4730 | |
| 135 | I | A | 0.0000 | |
| 136 | K | A | -1.6987 | |
| 137 | A | A | 0.0000 | |
| 138 | W | A | -0.0415 | |
| 139 | T | A | 0.0000 | |
| 140 | H | A | -1.0692 | |
| 141 | F | A | 0.0000 | |
| 142 | H | A | -1.5572 | |
| 143 | F | A | 0.0000 | |
| 144 | P | A | -1.0478 | |
| 145 | G | A | -1.0130 | |
| 146 | R | A | 0.0000 | |
| 147 | G | A | -0.9512 | |
| 148 | S | A | -1.1866 | |
| 149 | T | A | -0.3346 | |
| 150 | Y | A | 0.1159 | |
| 151 | S | A | 0.0000 | |
| 152 | D | A | -1.8410 | |
| 153 | F | A | -1.2703 | |
| 154 | K | A | -1.5667 | |
| 155 | W | A | -0.8308 | |
| 156 | H | A | -0.6038 | |
| 157 | W | A | -0.1052 | |
| 158 | Y | A | 0.3131 | |
| 159 | H | A | 0.0000 | |
| 160 | F | A | 0.0000 | |
| 161 | D | A | 0.0000 | |
| 162 | G | A | 0.0000 | |
| 163 | T | A | 0.0000 | |
| 164 | D | A | -0.7787 | |
| 165 | W | A | -0.9705 | |
| 166 | D | A | 0.0000 | |
| 167 | E | A | -1.6871 | |
| 168 | S | A | -1.5393 | |
| 169 | R | A | -2.1455 | |
| 170 | K | A | -2.6606 | |
| 171 | L | A | -1.8764 | |
| 172 | N | A | -2.3030 | |
| 173 | R | A | -2.2718 | |
| 174 | I | A | 0.0000 | |
| 175 | Y | A | 0.0000 | |
| 176 | K | A | -0.9216 | |
| 177 | F | A | 0.0000 | |
| 178 | Q | A | -1.0650 | |
| 179 | G | A | -0.7548 | |
| 180 | K | A | -0.7248 | |
| 181 | A | A | -0.6083 | |
| 182 | W | A | 0.0000 | |
| 183 | D | A | 0.0000 | |
| 184 | W | A | -0.4101 | |
| 185 | E | A | -1.2816 | |
| 186 | V | A | 0.0000 | |
| 187 | S | A | -1.3257 | |
| 188 | N | A | -2.0676 | |
| 189 | E | A | -2.0944 | |
| 190 | F | A | -1.0328 | |
| 191 | G | A | -1.9465 | |
| 192 | N | A | 0.0000 | |
| 193 | Y | A | -0.8423 | |
| 194 | D | A | 0.0000 | |
| 195 | Y | A | 0.0000 | |
| 196 | L | A | 1.0389 | |
| 197 | M | A | 1.1710 | |
| 198 | Y | A | 1.3910 | |
| 199 | A | A | 0.0000 | |
| 200 | D | A | 0.0000 | |
| 201 | I | A | 0.0000 | |
| 202 | D | A | 0.0000 | |
| 203 | Y | A | 0.0000 | |
| 204 | D | A | -2.1295 | |
| 205 | H | A | -1.6083 | |
| 206 | P | A | -1.7375 | |
| 207 | D | A | -2.2402 | |
| 208 | V | A | 0.0000 | |
| 209 | A | A | -1.3662 | |
| 210 | A | A | -1.2156 | |
| 211 | E | A | -1.1397 | |
| 212 | I | A | 0.0000 | |
| 213 | K | A | -1.4352 | |
| 214 | R | A | -1.3794 | |
| 215 | W | A | 0.0000 | |
| 216 | G | A | 0.0000 | |
| 217 | T | A | -1.4364 | |
| 218 | W | A | -0.8336 | |
| 219 | Y | A | 0.0000 | |
| 220 | A | A | 0.0000 | |
| 221 | N | A | -1.9099 | |
| 222 | E | A | -1.4371 | |
| 223 | L | A | 0.0000 | |
| 224 | Q | A | -2.1087 | |
| 225 | L | A | 0.0000 | |
| 226 | D | A | -1.1625 | |
| 227 | G | A | 0.0000 | |
| 228 | F | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | L | A | 0.0000 | |
| 231 | D | A | -0.6398 | |
| 232 | A | A | -0.2853 | |
| 233 | V | A | 0.0000 | |
| 234 | K | A | -0.9155 | |
| 235 | H | A | -0.5488 | |
| 236 | I | A | 0.0000 | |
| 237 | K | A | -0.9175 | |
| 238 | F | A | 0.0000 | |
| 239 | S | A | -1.0307 | |
| 240 | F | A | 0.0000 | |
| 241 | L | A | 0.0000 | |
| 242 | R | A | -1.4399 | |
| 243 | D | A | -1.5726 | |
| 244 | W | A | 0.0000 | |
| 245 | V | A | 0.0000 | |
| 246 | N | A | -2.2442 | |
| 247 | H | A | -2.2194 | |
| 248 | V | A | 0.0000 | |
| 249 | R | A | -2.9238 | |
| 250 | E | A | -3.6126 | |
| 251 | K | A | -3.3096 | |
| 252 | T | A | -2.5721 | |
| 253 | G | A | -2.4028 | |
| 254 | K | A | -2.5321 | |
| 255 | E | A | -2.6334 | |
| 256 | M | A | 0.0000 | |
| 257 | F | A | -0.3198 | |
| 258 | T | A | 0.0000 | |
| 259 | V | A | 0.0000 | |
| 260 | A | A | 0.0000 | |
| 261 | E | A | -0.3072 | |
| 262 | Y | A | 0.0866 | |
| 263 | W | A | 0.1880 | |
| 264 | S | A | 0.1276 | |
| 265 | Y | A | 0.5790 | |
| 266 | D | A | -1.3083 | |
| 267 | L | A | -1.1431 | |
| 268 | G | A | -1.0803 | |
| 269 | A | A | -0.9889 | |
| 270 | L | A | 0.0000 | |
| 271 | E | A | -1.8001 | |
| 272 | N | A | -1.9940 | |
| 273 | Y | A | 0.0000 | |
| 274 | L | A | 0.0000 | |
| 275 | N | A | -2.0280 | |
| 276 | K | A | -2.0585 | |
| 277 | T | A | 0.0000 | |
| 278 | N | A | -1.8137 | |
| 279 | F | A | -0.6326 | |
| 280 | N | A | -0.7562 | |
| 281 | H | A | 0.0000 | |
| 282 | S | A | 0.2476 | |
| 283 | V | A | 0.0000 | |
| 284 | F | A | 0.0000 | |
| 285 | D | A | 0.0000 | |
| 286 | V | A | 0.0000 | |
| 287 | P | A | 0.0000 | |
| 288 | L | A | 0.0000 | |
| 289 | H | A | 0.0000 | |
| 290 | Y | A | 0.4839 | |
| 291 | Q | A | 0.0000 | |
| 292 | F | A | 0.0000 | |
| 293 | H | A | -0.6423 | |
| 294 | A | A | -0.5035 | |
| 295 | A | A | 0.0000 | |
| 296 | S | A | 0.0000 | |
| 297 | T | A | -0.8662 | |
| 298 | Q | A | -1.4321 | |
| 299 | G | A | -0.9942 | |
| 300 | G | A | -0.9849 | |
| 301 | G | A | -0.9467 | |
| 302 | Y | A | -1.1480 | |
| 303 | D | A | -1.6887 | |
| 304 | M | A | 0.0000 | |
| 305 | R | A | -3.0017 | |
| 306 | K | A | -2.8167 | |
| 307 | L | A | 0.0000 | |
| 308 | L | A | -1.3654 | |
| 309 | N | A | -2.1671 | |
| 310 | G | A | -1.4035 | |
| 311 | T | A | 0.0000 | |
| 312 | V | A | 0.0000 | |
| 313 | V | A | -0.3707 | |
| 314 | S | A | -1.2540 | |
| 315 | K | A | -1.9056 | |
| 316 | H | A | -0.7027 | |
| 317 | P | A | -0.2640 | |
| 318 | L | A | 1.1230 | |
| 319 | K | A | 0.2152 | |
| 320 | S | A | 0.0000 | |
| 321 | V | A | 0.0000 | |
| 322 | T | A | 0.0000 | |
| 323 | F | A | 0.0000 | |
| 324 | V | A | 0.0000 | |
| 325 | D | A | 0.0000 | |
| 326 | N | A | 0.0000 | |
| 327 | H | A | 0.0000 | |
| 328 | D | A | -0.4292 | |
| 329 | T | A | 0.0000 | |
| 330 | Q | A | 0.0000 | |
| 331 | P | A | 0.0000 | |
| 332 | G | A | -1.6259 | |
| 333 | Q | A | -0.7585 | |
| 334 | S | A | -0.4765 | |
| 335 | L | A | -0.1285 | |
| 336 | E | A | -1.2762 | |
| 337 | S | A | 0.0000 | |
| 338 | T | A | -0.8673 | |
| 339 | V | A | 0.0000 | |
| 340 | Q | A | -0.7855 | |
| 341 | T | A | -0.2898 | |
| 342 | W | A | 0.0923 | |
| 343 | F | A | 0.0000 | |
| 344 | K | A | 0.0000 | |
| 345 | P | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | A | A | 0.0000 | |
| 348 | Y | A | 0.0000 | |
| 349 | A | A | 0.0000 | |
| 350 | F | A | 0.0000 | |
| 351 | I | A | 0.0000 | |
| 352 | L | A | 0.0000 | |
| 353 | T | A | 0.0000 | |
| 354 | R | A | -1.3506 | |
| 355 | E | A | -2.0368 | |
| 356 | S | A | -0.7950 | |
| 357 | G | A | -0.0878 | |
| 358 | Y | A | 0.1530 | |
| 359 | P | A | 0.0000 | |
| 360 | Q | A | 0.0000 | |
| 361 | V | A | 0.0000 | |
| 362 | F | A | 0.0000 | |
| 363 | Y | A | 0.2044 | |
| 364 | G | A | 0.0000 | |
| 365 | D | A | 0.0000 | |
| 366 | M | A | 0.0000 | |
| 367 | Y | A | -0.1170 | |
| 368 | G | A | -0.5286 | |
| 369 | T | A | 0.0000 | |
| 370 | K | A | -1.9945 | |
| 371 | G | A | -2.1513 | |
| 372 | D | A | -2.8371 | |
| 373 | S | A | -2.5532 | |
| 374 | Q | A | -2.6454 | |
| 375 | R | A | -2.9299 | |
| 376 | E | A | -2.3973 | |
| 377 | I | A | 0.0000 | |
| 378 | P | A | -0.7793 | |
| 379 | A | A | -0.5162 | |
| 380 | L | A | 0.0000 | |
| 381 | K | A | -1.7687 | |
| 382 | H | A | -2.1934 | |
| 383 | K | A | -2.2762 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -1.8912 | |
| 386 | P | A | -1.1083 | |
| 387 | I | A | 0.0000 | |
| 388 | L | A | 0.0000 | |
| 389 | K | A | -1.1315 | |
| 390 | A | A | 0.0000 | |
| 391 | R | A | 0.0000 | |
| 392 | K | A | -0.7502 | |
| 393 | Q | A | -0.6131 | |
| 394 | Y | A | -0.5897 | |
| 395 | A | A | 0.0000 | |
| 396 | Y | A | -0.8184 | |
| 397 | G | A | -1.0673 | |
| 398 | A | A | -0.8243 | |
| 399 | Q | A | -1.3539 | |
| 400 | H | A | -1.1912 | |
| 401 | D | A | -2.0257 | |
| 402 | Y | A | -1.6493 | |
| 403 | F | A | -1.9817 | |
| 404 | D | A | -2.5410 | |
| 405 | H | A | -1.8840 | |
| 406 | H | A | -2.0060 | |
| 407 | D | A | -1.3938 | |
| 408 | I | A | 0.0000 | |
| 409 | V | A | 0.0000 | |
| 410 | G | A | 0.0000 | |
| 411 | W | A | 0.0000 | |
| 412 | T | A | 0.0000 | |
| 413 | R | A | 0.0000 | |
| 414 | E | A | -1.3030 | |
| 415 | G | A | -1.7082 | |
| 416 | D | A | -2.0211 | |
| 417 | S | A | -1.2846 | |
| 418 | S | A | -0.6204 | |
| 419 | V | A | -0.4545 | |
| 420 | A | A | -0.8822 | |
| 421 | N | A | -1.8040 | |
| 422 | S | A | 0.0000 | |
| 423 | G | A | 0.0000 | |
| 424 | L | A | 0.0000 | |
| 425 | A | A | 0.0000 | |
| 426 | A | A | 0.0000 | |
| 427 | L | A | 0.0000 | |
| 428 | I | A | 0.0000 | |
| 429 | T | A | 0.0000 | |
| 430 | D | A | 0.0000 | |
| 431 | G | A | 0.0000 | |
| 432 | P | A | -0.8407 | |
| 433 | G | A | -1.0279 | |
| 434 | G | A | -0.8541 | |
| 435 | A | A | -1.2281 | |
| 436 | K | A | -2.1217 | |
| 437 | R | A | -2.4042 | |
| 438 | M | A | 0.0000 | |
| 439 | Y | A | -0.6641 | |
| 440 | V | A | 0.0000 | |
| 441 | G | A | 0.0000 | |
| 442 | R | A | -2.5487 | |
| 443 | Q | A | -2.7612 | |
| 444 | N | A | 0.0000 | |
| 445 | A | A | -1.4996 | |
| 446 | G | A | -1.3210 | |
| 447 | E | A | -1.4923 | |
| 448 | T | A | -0.8704 | |
| 449 | W | A | 0.0000 | |
| 450 | H | A | -1.4853 | |
| 451 | D | A | 0.0000 | |
| 452 | I | A | -0.3927 | |
| 453 | T | A | -0.8364 | |
| 454 | G | A | -1.2355 | |
| 455 | N | A | -1.4777 | |
| 456 | R | A | -1.9073 | |
| 457 | S | A | -1.7368 | |
| 458 | E | A | -2.2001 | |
| 459 | P | A | -1.3502 | |
| 460 | V | A | 0.0000 | |
| 461 | V | A | 0.5082 | |
| 462 | I | A | 0.0000 | |
| 463 | N | A | -1.2317 | |
| 464 | S | A | -1.1348 | |
| 465 | A | A | -0.7952 | |
| 466 | G | A | 0.0000 | |
| 467 | W | A | -0.5939 | |
| 468 | G | A | 0.0000 | |
| 469 | E | A | -1.8116 | |
| 470 | F | A | 0.0000 | |
| 471 | H | A | -1.5716 | |
| 472 | V | A | 0.0000 | |
| 473 | N | A | -1.1698 | |
| 474 | G | A | -1.0379 | |
| 475 | G | A | -0.6059 | |
| 476 | S | A | -0.4575 | |
| 477 | V | A | 0.0000 | |
| 478 | S | A | 0.0000 | |
| 479 | I | A | 0.0000 | |
| 480 | Y | A | 0.0000 | |
| 481 | V | A | 0.0000 | |
| 482 | Q | A | -1.9718 | |
| 483 | R | A | -2.1769 |
Calculations for various pH values
This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.
pH |
Average A4D Score |
Max A4D Score |
|||
| 4.0 | -0.596 | 2.0305 | View | CSV | PDB |
| 4.5 | -0.6444 | 2.0102 | View | CSV | PDB |
| 5.0 | -0.7014 | 1.9882 | View | CSV | PDB |
| 5.5 | -0.7566 | 1.9655 | View | CSV | PDB |
| 6.0 | -0.8007 | 1.9426 | View | CSV | PDB |
| 6.5 | -0.8287 | 1.9197 | View | CSV | PDB |
| 7.0 | -0.8418 | 1.8999 | View | CSV | PDB |
| 7.5 | -0.8451 | 1.9946 | View | CSV | PDB |
| 8.0 | -0.8421 | 2.093 | View | CSV | PDB |
| 8.5 | -0.8329 | 2.1925 | View | CSV | PDB |
| 9.0 | -0.8166 | 2.2915 | View | CSV | PDB |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine