Chain sequence(s) |
A: MTKFTILLISLLFCIAHTCSASKWQHQQDSCRKQLQGVNLTPCEKHIMEKIQGRGDDDDDDDDDNHILRTMRGRINYIRRNEGKDEDEEEEGHMQKCCTEMSELRSPKCQCKALQKIMENQSEELEEKQKKKMEKELINLATMCRFGPMIQCDLSSDD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.3159 | |
2 | T | A | 0.9276 | |
3 | K | A | 0.7877 | |
4 | F | A | 3.2277 | |
5 | T | A | 3.2366 | |
6 | I | A | 4.3980 | |
7 | L | A | 4.8841 | |
8 | L | A | 5.4106 | |
9 | I | A | 5.9195 | |
10 | S | A | 4.9196 | |
11 | L | A | 5.3030 | |
12 | L | A | 5.3543 | |
13 | F | A | 4.6989 | |
14 | C | A | 3.6001 | |
15 | I | A | 3.5158 | |
16 | A | A | 2.0325 | |
17 | H | A | 0.6185 | |
18 | T | A | 0.7804 | |
19 | C | A | 0.5754 | |
20 | S | A | -0.4699 | |
21 | A | A | -0.6761 | |
22 | S | A | -1.4136 | |
23 | K | A | -2.2561 | |
24 | W | A | -1.0584 | |
25 | Q | A | -2.3285 | |
26 | H | A | -2.8979 | |
27 | Q | A | -2.8219 | |
28 | Q | A | -3.1461 | |
29 | D | A | -3.2779 | |
30 | S | A | -2.6897 | |
31 | C | A | 0.0000 | |
32 | R | A | -3.8960 | |
33 | K | A | -3.5868 | |
34 | Q | A | -2.9425 | |
35 | L | A | -2.6347 | |
36 | Q | A | -2.5855 | |
37 | G | A | -2.1700 | |
38 | V | A | -1.6469 | |
39 | N | A | -1.6017 | |
40 | L | A | 0.0000 | |
41 | T | A | -1.0291 | |
42 | P | A | -1.6204 | |
43 | C | A | 0.0000 | |
44 | E | A | -1.4362 | |
45 | K | A | -1.8391 | |
46 | H | A | 0.0000 | |
47 | I | A | 0.0000 | |
48 | M | A | -1.4532 | |
49 | E | A | -2.3600 | |
50 | K | A | -2.3337 | |
51 | I | A | 0.0000 | |
52 | Q | A | -2.7912 | |
53 | G | A | -2.8214 | |
54 | R | A | -3.9055 | |
55 | G | A | -3.3714 | |
56 | D | A | -4.1645 | |
57 | D | A | -4.6728 | |
58 | D | A | -5.0423 | |
59 | D | A | -4.6090 | |
60 | D | A | -4.6148 | |
61 | D | A | -4.9148 | |
62 | D | A | -4.7358 | |
63 | D | A | -4.3595 | |
64 | D | A | -3.6599 | |
65 | N | A | -2.7455 | |
66 | H | A | -1.3429 | |
67 | I | A | 1.1634 | |
68 | L | A | 0.5471 | |
69 | R | A | -1.5718 | |
70 | T | A | -0.3757 | |
71 | M | A | 0.5241 | |
72 | R | A | -1.3338 | |
73 | G | A | -0.9331 | |
74 | R | A | -0.4866 | |
75 | I | A | 0.5589 | |
76 | N | A | -1.4656 | |
77 | Y | A | -0.5776 | |
78 | I | A | 0.2414 | |
79 | R | A | -2.5669 | |
80 | R | A | -3.7825 | |
81 | N | A | -3.6826 | |
82 | E | A | -3.6575 | |
83 | G | A | -3.9231 | |
84 | K | A | -4.6605 | |
85 | D | A | -4.6204 | |
86 | E | A | -4.5935 | |
87 | D | A | -4.4781 | |
88 | E | A | -4.8494 | |
89 | E | A | -4.2486 | |
90 | E | A | -3.6892 | |
91 | E | A | -3.3247 | |
92 | G | A | -3.0009 | |
93 | H | A | -2.6935 | |
94 | M | A | 0.0000 | |
95 | Q | A | -2.6129 | |
96 | K | A | -2.7367 | |
97 | C | A | 0.0000 | |
98 | C | A | -1.4812 | |
99 | T | A | -1.7127 | |
100 | E | A | -1.9655 | |
101 | M | A | 0.0000 | |
102 | S | A | -2.0238 | |
103 | E | A | -2.6606 | |
104 | L | A | 0.0000 | |
105 | R | A | -2.7747 | |
106 | S | A | -2.0347 | |
107 | P | A | -1.7279 | |
108 | K | A | -2.6157 | |
109 | C | A | 0.0000 | |
110 | Q | A | -1.7354 | |
111 | C | A | -1.7120 | |
112 | K | A | -2.2414 | |
113 | A | A | 0.0000 | |
114 | L | A | 0.0000 | |
115 | Q | A | -2.3524 | |
116 | K | A | -2.3875 | |
117 | I | A | 0.0000 | |
118 | M | A | 0.0000 | |
119 | E | A | -3.4160 | |
120 | N | A | -3.1721 | |
121 | Q | A | -2.6978 | |
122 | S | A | -3.6533 | |
123 | E | A | -3.9345 | |
124 | E | A | -3.6100 | |
125 | L | A | 0.0000 | |
126 | E | A | -4.4760 | |
127 | E | A | -4.7133 | |
128 | K | A | -4.2239 | |
129 | Q | A | -4.1688 | |
130 | K | A | -4.5681 | |
131 | K | A | -4.4496 | |
132 | K | A | -3.9524 | |
133 | M | A | 0.0000 | |
134 | E | A | -2.9640 | |
135 | K | A | -2.8466 | |
136 | E | A | -1.7262 | |
137 | L | A | 0.0000 | |
138 | I | A | -0.0404 | |
139 | N | A | -0.6571 | |
140 | L | A | 0.0000 | |
141 | A | A | 0.0000 | |
142 | T | A | -0.5342 | |
143 | M | A | -0.1022 | |
144 | C | A | -0.7971 | |
145 | R | A | -1.7494 | |
146 | F | A | 0.0000 | |
147 | G | A | -0.9383 | |
148 | P | A | -0.3528 | |
149 | M | A | -0.0425 | |
150 | I | A | 1.2162 | |
151 | Q | A | -0.9323 | |
152 | C | A | -1.2853 | |
153 | D | A | -2.3610 | |
154 | L | A | 0.0000 | |
155 | S | A | -2.3270 | |
156 | S | A | -2.5000 | |
157 | D | A | -3.0610 | |
158 | D | A | -2.7440 |