Chain sequence(s) |
A: SMELEEQREKLRKSLDEVRENPGKKQTVTLTGKNGEKINIEIELKDGVLTLYYWKSSSSGKKTAKTNIELTDENIKDFVELMEKVMLEGVSPENVEKGIKEHSKKHGKKVEFSEE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] FoldX: Starting FoldX energy minimization (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:03:44) [INFO] Main: Simulation completed successfully. (00:03:44) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | S | A | -0.9488 | |
2 | M | A | -1.4579 | |
3 | E | A | -2.8992 | |
4 | L | A | -2.6205 | |
5 | E | A | -3.8843 | |
6 | E | A | -4.1993 | |
7 | Q | A | 0.0000 | |
8 | R | A | -4.3840 | |
9 | E | A | -4.5994 | |
10 | K | A | -3.8827 | |
11 | L | A | 0.0000 | |
12 | R | A | -4.1492 | |
13 | K | A | -3.7940 | |
14 | S | A | 0.0000 | |
15 | L | A | 0.0000 | |
16 | D | A | -3.0137 | |
17 | E | A | -3.1926 | |
18 | V | A | 0.0000 | |
19 | R | A | -2.7904 | |
20 | E | A | -2.9059 | |
21 | N | A | -2.6956 | |
22 | P | A | -2.7072 | |
23 | G | A | -2.5994 | |
24 | K | A | -3.3753 | |
25 | K | A | -2.9597 | |
26 | Q | A | -2.0218 | |
27 | T | A | -0.8149 | |
28 | V | A | 0.0000 | |
29 | T | A | -0.6318 | |
30 | L | A | 0.0000 | |
31 | T | A | -1.5801 | |
32 | G | A | -2.3965 | |
33 | K | A | -3.0090 | |
34 | N | A | -2.5478 | |
35 | G | A | -2.1456 | |
36 | E | A | -2.3716 | |
37 | K | A | -2.4006 | |
38 | I | A | 0.0000 | |
39 | N | A | -0.7615 | |
40 | I | A | 0.0000 | |
41 | E | A | -0.7369 | |
42 | I | A | 0.0000 | |
43 | E | A | -1.9594 | |
44 | L | A | -2.6053 | |
45 | K | A | -2.9591 | |
46 | D | A | -2.6849 | |
47 | G | A | -2.1775 | |
48 | V | A | -1.7020 | |
49 | L | A | 0.0000 | |
50 | T | A | 0.0000 | |
51 | L | A | 0.0000 | |
52 | Y | A | -0.6879 | |
53 | Y | A | 0.0000 | |
54 | W | A | -1.2083 | |
55 | K | A | -1.6754 | |
56 | S | A | -1.2605 | |
57 | S | A | -0.8977 | |
58 | S | A | -0.7663 | |
59 | S | A | -1.0950 | |
60 | G | A | -1.9741 | |
61 | K | A | -2.3030 | |
62 | K | A | -2.2608 | |
63 | T | A | -1.5914 | |
64 | A | A | 0.0000 | |
65 | K | A | -1.6900 | |
66 | T | A | -2.0588 | |
67 | N | A | -2.7493 | |
68 | I | A | 0.0000 | |
69 | E | A | -2.6052 | |
70 | L | A | -1.9592 | |
71 | T | A | -2.3366 | |
72 | D | A | -3.5092 | |
73 | E | A | -3.4293 | |
74 | N | A | 0.0000 | |
75 | I | A | 0.0000 | |
76 | K | A | -3.4180 | |
77 | D | A | -2.7277 | |
78 | F | A | 0.0000 | |
79 | V | A | 0.0000 | |
80 | E | A | -2.7386 | |
81 | L | A | -1.9920 | |
82 | M | A | 0.0000 | |
83 | E | A | -1.9555 | |
84 | K | A | -2.1505 | |
85 | V | A | 0.0000 | |
86 | M | A | 0.0000 | |
87 | L | A | -1.3265 | |
88 | E | A | -2.2538 | |
89 | G | A | -2.0952 | |
90 | V | A | 0.0000 | |
91 | S | A | -1.6816 | |
92 | P | A | 0.0000 | |
93 | E | A | -2.5399 | |
94 | N | A | -2.4193 | |
95 | V | A | 0.0000 | |
96 | E | A | -2.3002 | |
97 | K | A | -3.1892 | |
98 | G | A | 0.0000 | |
99 | I | A | 0.0000 | |
100 | K | A | -3.6069 | |
101 | E | A | -3.8288 | |
102 | H | A | 0.0000 | |
103 | S | A | 0.0000 | |
104 | K | A | -4.0950 | |
105 | K | A | -3.5240 | |
106 | H | A | -2.7890 | |
107 | G | A | -2.6215 | |
108 | K | A | -3.1335 | |
109 | K | A | -3.2235 | |
110 | V | A | -2.3847 | |
111 | E | A | -2.3387 | |
112 | F | A | -1.2360 | |
113 | S | A | -1.9000 | |
114 | E | A | -3.1219 | |
115 | E | A | -3.1936 |