Project name: b62be89397d1074

Status: done

Started: 2025-03-12 07:15:48
Chain sequence(s) A: SMELEEQREKLRKSLDEVRENPGKKQTVTLTGKNGEKINIEIELKDGVLTLYYWKSSSSGKKTAKTNIELTDENIKDFVELMEKVMLEGVSPENVEKGIKEHSKKHGKKVEFSEE
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:00)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:03:44)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:44)
Show buried residues

Minimal score value
-4.5994
Maximal score value
0.0
Average score
-1.8122
Total score value
-208.4085

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 S A -0.9488
2 M A -1.4579
3 E A -2.8992
4 L A -2.6205
5 E A -3.8843
6 E A -4.1993
7 Q A 0.0000
8 R A -4.3840
9 E A -4.5994
10 K A -3.8827
11 L A 0.0000
12 R A -4.1492
13 K A -3.7940
14 S A 0.0000
15 L A 0.0000
16 D A -3.0137
17 E A -3.1926
18 V A 0.0000
19 R A -2.7904
20 E A -2.9059
21 N A -2.6956
22 P A -2.7072
23 G A -2.5994
24 K A -3.3753
25 K A -2.9597
26 Q A -2.0218
27 T A -0.8149
28 V A 0.0000
29 T A -0.6318
30 L A 0.0000
31 T A -1.5801
32 G A -2.3965
33 K A -3.0090
34 N A -2.5478
35 G A -2.1456
36 E A -2.3716
37 K A -2.4006
38 I A 0.0000
39 N A -0.7615
40 I A 0.0000
41 E A -0.7369
42 I A 0.0000
43 E A -1.9594
44 L A -2.6053
45 K A -2.9591
46 D A -2.6849
47 G A -2.1775
48 V A -1.7020
49 L A 0.0000
50 T A 0.0000
51 L A 0.0000
52 Y A -0.6879
53 Y A 0.0000
54 W A -1.2083
55 K A -1.6754
56 S A -1.2605
57 S A -0.8977
58 S A -0.7663
59 S A -1.0950
60 G A -1.9741
61 K A -2.3030
62 K A -2.2608
63 T A -1.5914
64 A A 0.0000
65 K A -1.6900
66 T A -2.0588
67 N A -2.7493
68 I A 0.0000
69 E A -2.6052
70 L A -1.9592
71 T A -2.3366
72 D A -3.5092
73 E A -3.4293
74 N A 0.0000
75 I A 0.0000
76 K A -3.4180
77 D A -2.7277
78 F A 0.0000
79 V A 0.0000
80 E A -2.7386
81 L A -1.9920
82 M A 0.0000
83 E A -1.9555
84 K A -2.1505
85 V A 0.0000
86 M A 0.0000
87 L A -1.3265
88 E A -2.2538
89 G A -2.0952
90 V A 0.0000
91 S A -1.6816
92 P A 0.0000
93 E A -2.5399
94 N A -2.4193
95 V A 0.0000
96 E A -2.3002
97 K A -3.1892
98 G A 0.0000
99 I A 0.0000
100 K A -3.6069
101 E A -3.8288
102 H A 0.0000
103 S A 0.0000
104 K A -4.0950
105 K A -3.5240
106 H A -2.7890
107 G A -2.6215
108 K A -3.1335
109 K A -3.2235
110 V A -2.3847
111 E A -2.3387
112 F A -1.2360
113 S A -1.9000
114 E A -3.1219
115 E A -3.1936
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