Chain sequence(s) |
A: MGMSKSIKVILSLALVVFLALAGTKVEASVRYITYPAIDRGDHAVHCDKAHPNTCKKKQANPYRRGCGVLEGCHRETGPKPT
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:00) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 1.0698 | |
2 | G | A | 0.2965 | |
3 | M | A | 0.5033 | |
4 | S | A | -0.2578 | |
5 | K | A | -1.1347 | |
6 | S | A | 0.4807 | |
7 | I | A | 1.8768 | |
8 | K | A | 0.6463 | |
9 | V | A | 2.7763 | |
10 | I | A | 4.0484 | |
11 | L | A | 3.8299 | |
12 | S | A | 3.5569 | |
13 | L | A | 4.8426 | |
14 | A | A | 4.3055 | |
15 | L | A | 5.3712 | |
16 | V | A | 5.4074 | |
17 | V | A | 5.0238 | |
18 | F | A | 5.1620 | |
19 | L | A | 4.5504 | |
20 | A | A | 3.0080 | |
21 | L | A | 3.2591 | |
22 | A | A | 1.7691 | |
23 | G | A | 0.5715 | |
24 | T | A | -0.3258 | |
25 | K | A | -1.1722 | |
26 | V | A | 0.3525 | |
27 | E | A | -1.2703 | |
28 | A | A | -0.6840 | |
29 | S | A | -0.1337 | |
30 | V | A | 1.3009 | |
31 | R | A | 0.1300 | |
32 | Y | A | 1.9989 | |
33 | I | A | 2.6549 | |
34 | T | A | 1.6414 | |
35 | Y | A | 2.1690 | |
36 | P | A | 0.9627 | |
37 | A | A | 0.3818 | |
38 | I | A | 0.7482 | |
39 | D | A | -2.4782 | |
40 | R | A | -3.5612 | |
41 | G | A | -2.8602 | |
42 | D | A | -3.3591 | |
43 | H | A | -2.7617 | |
44 | A | A | -1.3363 | |
45 | V | A | -0.7567 | |
46 | H | A | -0.9231 | |
47 | C | A | -1.5849 | |
48 | D | A | -2.6519 | |
49 | K | A | -2.8888 | |
50 | A | A | -1.8721 | |
51 | H | A | -2.3978 | |
52 | P | A | -2.4598 | |
53 | N | A | -2.3828 | |
54 | T | A | -1.8591 | |
55 | C | A | -2.2467 | |
56 | K | A | -3.2089 | |
57 | K | A | -4.2529 | |
58 | K | A | -4.8630 | |
59 | Q | A | -3.4092 | |
60 | A | A | -1.9650 | |
61 | N | A | -2.0275 | |
62 | P | A | -1.3243 | |
63 | Y | A | -0.6356 | |
64 | R | A | -2.4530 | |
65 | R | A | -2.5560 | |
66 | G | A | -1.2062 | |
67 | C | A | -0.2064 | |
68 | G | A | 0.5045 | |
69 | V | A | 1.9817 | |
70 | L | A | 1.5167 | |
71 | E | A | -0.6425 | |
72 | G | A | -0.6315 | |
73 | C | A | -0.5701 | |
74 | H | A | -2.3204 | |
75 | R | A | -3.1242 | |
76 | E | A | -3.2941 | |
77 | T | A | -1.9655 | |
78 | G | A | -1.7927 | |
79 | P | A | -1.5922 | |
80 | K | A | -2.2705 | |
81 | P | A | -1.5255 | |
82 | T | A | -0.7782 |