Chain sequence(s) |
A: MASQQEKKELDARARQGETVVPGGTGGKSLEAQQHLAEGRSKGGQTRKEQLGGEGYHEMGRKGGLSNNDMSGGERAEQEGIDIDESKFRTKK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.5844 | |
2 | A | A | -0.9181 | |
3 | S | A | -2.0537 | |
4 | Q | A | -3.2208 | |
5 | Q | A | -3.9461 | |
6 | E | A | -4.0459 | |
7 | K | A | -4.1353 | |
8 | K | A | -4.3965 | |
9 | E | A | -4.2631 | |
10 | L | A | -2.9933 | |
11 | D | A | -3.5530 | |
12 | A | A | -3.0906 | |
13 | R | A | -3.1626 | |
14 | A | A | 0.0000 | |
15 | R | A | -3.9657 | |
16 | Q | A | -3.1974 | |
17 | G | A | -2.8376 | |
18 | E | A | -2.4060 | |
19 | T | A | -1.3349 | |
20 | V | A | -0.6389 | |
21 | V | A | -0.4615 | |
22 | P | A | -0.5412 | |
23 | G | A | -1.3411 | |
24 | G | A | 0.0000 | |
25 | T | A | -0.8595 | |
26 | G | A | -1.3234 | |
27 | G | A | 0.0000 | |
28 | K | A | -3.4621 | |
29 | S | A | -2.9619 | |
30 | L | A | -2.5360 | |
31 | E | A | -2.6274 | |
32 | A | A | -1.9695 | |
33 | Q | A | 0.0000 | |
34 | Q | A | -2.5032 | |
35 | H | A | -2.5055 | |
36 | L | A | -1.8421 | |
37 | A | A | -2.4239 | |
38 | E | A | -3.2138 | |
39 | G | A | -2.9928 | |
40 | R | A | -3.3628 | |
41 | S | A | -3.0319 | |
42 | K | A | -3.6231 | |
43 | G | A | -3.1191 | |
44 | G | A | -2.9327 | |
45 | Q | A | -3.4691 | |
46 | T | A | -2.9116 | |
47 | R | A | -2.9051 | |
48 | K | A | -3.6833 | |
49 | E | A | -3.5657 | |
50 | Q | A | -3.2987 | |
51 | L | A | 0.0000 | |
52 | G | A | -2.8751 | |
53 | G | A | -2.3803 | |
54 | E | A | -2.6564 | |
55 | G | A | 0.0000 | |
56 | Y | A | -2.2005 | |
57 | H | A | -2.2937 | |
58 | E | A | 0.0000 | |
59 | M | A | -1.6492 | |
60 | G | A | -1.7500 | |
61 | R | A | -2.0970 | |
62 | K | A | -2.2422 | |
63 | G | A | -1.6074 | |
64 | G | A | -1.4306 | |
65 | L | A | -1.3982 | |
66 | S | A | -1.8791 | |
67 | N | A | -2.0947 | |
68 | N | A | -2.4745 | |
69 | D | A | -2.7913 | |
70 | M | A | -1.8609 | |
71 | S | A | -1.7225 | |
72 | G | A | 0.0000 | |
73 | G | A | -2.5470 | |
74 | E | A | -3.4757 | |
75 | R | A | -3.2454 | |
76 | A | A | 0.0000 | |
77 | E | A | -4.0734 | |
78 | Q | A | -3.6573 | |
79 | E | A | -3.5709 | |
80 | G | A | -2.7570 | |
81 | I | A | -2.2017 | |
82 | D | A | -2.5209 | |
83 | I | A | -2.0596 | |
84 | D | A | -2.4545 | |
85 | E | A | -2.7074 | |
86 | S | A | -1.9979 | |
87 | K | A | -2.7662 | |
88 | F | A | -2.3818 | |
89 | R | A | -3.0740 | |
90 | T | A | -3.0281 | |
91 | K | A | -3.5243 | |
92 | K | A | -2.8712 |