Project name: POL3A

Status: done

Started: 2026-07-14 15:48:27
Chain sequence(s) A: KEQFRETDVAKKISHICFGMKSPEEMRQQAHIQVVSKNLYSQDNQHAPLLYGVLDHRMGTSEKDRPCETCGKNLADCLGHYGYIDLELPCFHVGYFRAVIGILQMICKTCCHIMLSQEEKKQFLDYLKRPGLTYLQKRGLKKKISDKCRKKNICHHCGAFNGTVKKCGLLKIIHEKYKTNKKVVDPIVSNFLQSFETAIEHNKEVEPLLGRAQENLNPLVVLNLFKRIPAEDVPLLLMNPEAGKPSDLILTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRISGAKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKRVDFSGRTVISPDPNLRIDEVAVPVHVAKILTFPEKVNKANINFLRKLVQNGPEVHPGANFIQQRHTQMKRFLKYGNREKMAQELKYGDIVERHLIDGDVVLFNRQPSLHKLSIMAHLARVKPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIAAIQDFLTGAYLLTLKDTFFDRAKACQIIASILVGKDEKIKVRLPPPTILKPVTLWTGKQIFSVILRPSDDNPVRANLRTKGKQYCGKGEDLCANDSYVTIQNSELMSGSMDKGTLGSGSKNNIFYILLRDWGQNEAADAMSRLARLAPVYLSNRGFSIGIGDVTPGQGLLKAKYELLNAGYKKCDEYIEALNTGKLQQQPGCTAEETLEALILKELSVIRDHAGSACLRELDKSNSPLTMALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVANSFYSGLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQFIYGGDGLDPAAMEGKDEPLEFKRVLDNIKAVFPCPSEPALSKNELILTTESIMKKSEFLCCQDSFLQEIKKFIKGVSEKIKKTRDKYGINDNGTTEPRVLYQLDRITPTQVEKFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKEIINASKAISTPIITAQLDKDDDADYARLVKGRIEKTLLGEISEYIEEVFLPDDCFILVKLSLERIRLLRLEVNAETVRYSICTSKLRVKPGDVAVHGEAVVCVTPRENSKSSMYYVLQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTSNNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGLAKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADRDPNPPKRPLIFDTNEFHIPLVT
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:08)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:09)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:21:20)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/ba672a739bea5f3/tmp/folded.pdb                (00:21:20)
[INFO]       Main:     Simulation completed successfully.                                          (00:29:02)
Show buried residues

Minimal score value
-4.3569
Maximal score value
2.6733
Average score
-0.8353
Total score value
-1159.3866

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 K A -2.6177
2 E A -2.9652
3 Q A -2.0042
4 F A -0.6347
5 R A -2.3401
6 E A -2.5198
7 T A -1.7049
8 D A -1.5931
9 V A -0.0557
10 A A -0.8537
11 K A -1.9717
12 K A -1.8894
13 I A -0.3535
14 S A -0.3845
15 H A -0.4029
16 I A 0.1470
17 C A -0.0260
18 F A -0.0623
19 G A -0.8667
20 M A -0.8942
21 K A -2.2347
22 S A -1.8364
23 P A 0.0000
24 E A -3.3323
25 E A -3.0294
26 M A 0.0000
27 R A -3.8224
28 Q A -3.1229
29 Q A -2.4926
30 A A -1.8739
31 H A -1.8907
32 I A 0.0000
33 Q A -0.3218
34 V A 0.0000
35 V A 1.2987
36 S A 0.5108
37 K A -0.5399
38 N A -0.8816
39 L A -0.3539
40 Y A -0.7876
41 S A -1.6103
42 Q A -2.5377
43 D A -2.9270
44 N A -2.9894
45 Q A -2.8113
46 H A -2.4894
47 A A -1.1957
48 P A -0.0322
49 L A 0.9771
50 L A 1.8011
51 Y A 1.7468
52 G A 0.0000
53 V A 0.0000
54 L A 0.0000
55 D A 0.0000
56 H A 0.0000
57 R A -1.0148
58 M A 0.0000
59 G A 0.0000
60 T A 0.0000
61 S A -0.1782
62 E A -1.8154
63 K A -3.1387
64 D A -3.1397
65 R A -2.7163
66 P A -2.6226
67 C A 0.0000
68 E A -2.3183
69 T A -1.2933
70 C A -0.9453
71 G A -1.5660
72 K A -2.2179
73 N A -2.5991
74 L A -1.3880
75 A A -1.1106
76 D A -1.8116
77 C A 0.0000
78 L A 1.1586
79 G A 0.2503
80 H A -0.1615
81 Y A -0.7355
82 G A 0.0000
83 Y A 0.0000
84 I A 0.0000
85 D A -1.2802
86 L A 0.0000
87 E A -1.4451
88 L A 0.0000
89 P A -0.0875
90 C A 0.0000
91 F A 0.0000
92 H A -0.3078
93 V A -0.2697
94 G A -0.7039
95 Y A 0.0000
96 F A 0.0000
97 R A -2.3612
98 A A 0.0000
99 V A 0.0000
100 I A 0.0000
101 G A -1.2276
102 I A 0.0000
103 L A 0.0000
104 Q A -1.1602
105 M A 0.0000
106 I A 0.0000
107 C A 0.0000
108 K A -0.2598
109 T A -0.1486
110 C A -0.2348
111 C A 0.0000
112 H A -0.8275
113 I A 0.0000
114 M A 0.0000
115 L A 0.0000
116 S A -2.2046
117 Q A -3.0980
118 E A -3.4652
119 E A -2.7000
120 K A -2.4293
121 K A -3.3360
122 Q A -2.7584
123 F A 0.0000
124 L A -1.6593
125 D A -1.9809
126 Y A -1.4021
127 L A -1.4963
128 K A -2.4917
129 R A -2.6214
130 P A -1.5804
131 G A -1.1534
132 L A -0.8662
133 T A -0.9147
134 Y A 0.0000
135 L A -0.4920
136 Q A -1.1692
137 K A -1.2384
138 R A -1.7413
139 G A -1.8635
140 L A 0.0000
141 K A -2.2887
142 K A -3.1658
143 K A -3.0319
144 I A 0.0000
145 S A 0.0000
146 D A -2.8643
147 K A -2.6605
148 C A 0.0000
149 R A -3.5546
150 K A -3.2110
151 K A -2.1870
152 N A -1.4487
153 I A 0.3289
154 C A 0.0000
155 H A -1.2340
156 H A -0.7890
157 C A 0.0567
158 G A -0.1861
159 A A 0.2810
160 F A 0.6129
161 N A 0.0000
162 G A -1.4612
163 T A -1.6211
164 V A 0.0000
165 K A -2.1103
166 K A -2.1633
167 C A -0.7431
168 G A -0.5488
169 L A -0.1664
170 L A 0.0000
171 K A -0.9904
172 I A 0.0000
173 I A -1.2291
174 H A 0.0000
175 E A -2.1037
176 K A -1.2194
177 Y A -1.7158
178 K A -2.7169
179 T A -2.2192
180 N A -2.7381
181 K A -2.6440
182 K A -2.1098
183 V A 0.1333
184 V A -0.8604
185 D A -1.5252
186 P A -0.7641
187 I A -0.2233
188 V A 0.0000
189 S A -0.9801
190 N A -1.5212
191 F A -0.6032
192 L A -1.0821
193 Q A -1.8560
194 S A -1.2480
195 F A -1.3367
196 E A -2.6648
197 T A -1.8550
198 A A -2.0232
199 I A -2.7593
200 E A -3.1364
201 H A -2.7642
202 N A -2.9849
203 K A -3.5158
204 E A -3.0705
205 V A -2.5332
206 E A -2.7337
207 P A -1.5182
208 L A -0.8598
209 L A -0.9067
210 G A -1.4852
211 R A -2.1386
212 A A -1.2922
213 Q A -1.7731
214 E A -1.4103
215 N A -1.2310
216 L A 0.0000
217 N A -0.2210
218 P A 0.0000
219 L A 0.7368
220 V A 0.6954
221 V A 0.0000
222 L A -0.3263
223 N A -0.9016
224 L A 0.0000
225 F A 0.0000
226 K A -2.7171
227 R A -2.4733
228 I A 0.0000
229 P A -1.4122
230 A A -1.4805
231 E A -1.7981
232 D A 0.0000
233 V A 0.0000
234 P A -0.5585
235 L A 0.0000
236 L A 0.0000
237 L A 0.0000
238 M A 0.0000
239 N A -1.2562
240 P A -1.6868
241 E A -2.2881
242 A A 0.0000
243 G A 0.0000
244 K A -1.7319
245 P A 0.0000
246 S A -1.1844
247 D A -1.1374
248 L A 0.0000
249 I A 0.0000
250 L A 0.0000
251 T A -0.7096
252 R A -1.3075
253 L A 0.0000
254 L A -0.3007
255 V A 0.0000
256 P A 0.0000
257 P A 0.0000
258 L A 0.0000
259 C A 1.3850
260 I A 1.9515
261 R A 0.0000
262 P A 0.8175
263 S A 0.3112
264 V A 0.7754
265 V A 1.1070
266 S A -0.3254
267 D A -1.4303
268 L A -0.3808
269 K A -1.8277
270 S A -1.2538
271 G A -1.2255
272 T A -1.0451
273 N A -1.2211
274 E A -0.5523
275 D A 0.0212
276 D A -0.5351
277 L A 0.0000
278 T A 0.0000
279 M A -0.3615
280 K A 0.0000
281 L A 0.0000
282 T A -0.2882
283 E A -0.5151
284 I A 0.0000
285 I A 0.0000
286 F A 0.6270
287 L A 0.0000
288 N A -0.7392
289 D A -0.9584
290 V A -0.8599
291 I A 0.0000
292 K A -2.1840
293 K A -2.1986
294 H A -2.0008
295 R A -2.2283
296 I A 0.0663
297 S A -0.8854
298 G A -1.0996
299 A A -1.6872
300 K A -2.4356
301 T A -1.8517
302 Q A -1.8891
303 M A -1.6326
304 I A 0.0000
305 M A -0.9074
306 E A -1.4979
307 D A -0.9660
308 W A 0.0000
309 D A -0.7167
310 F A -0.3232
311 L A 0.0000
312 Q A 0.0000
313 L A 0.0000
314 Q A -0.2851
315 C A 0.0000
316 A A 0.0000
317 L A 0.0000
318 Y A -0.1256
319 I A 0.0000
320 N A -0.4605
321 S A -0.7449
322 E A -1.0899
323 L A -0.4589
324 S A -0.5009
325 G A -0.1740
326 I A 0.1359
327 P A 0.2490
328 L A 0.6984
329 N A -0.4801
330 M A -0.3647
331 A A -0.3758
332 P A -1.1139
333 K A -2.0659
334 K A -1.8204
335 W A -0.5410
336 T A 0.0000
337 R A -1.2164
338 G A 0.0000
339 F A 0.1984
340 V A -0.5866
341 Q A 0.0000
342 R A -1.6303
343 L A 0.0000
344 K A -2.4077
345 G A -2.5174
346 K A -3.5863
347 Q A -3.3870
348 G A 0.0000
349 R A -3.1408
350 F A 0.0000
351 R A -3.7387
352 G A -3.6611
353 N A -3.4328
354 L A -1.2856
355 S A -1.5618
356 G A -1.7664
357 K A -2.8483
358 R A -2.4013
359 V A -0.4150
360 D A -1.2181
361 F A 0.1546
362 S A -0.4615
363 G A -0.8363
364 R A -2.4379
365 T A -1.7223
366 V A -1.3044
367 I A 0.0000
368 S A -1.0618
369 P A -0.8284
370 D A -1.0585
371 P A -1.2013
372 N A -1.6204
373 L A 0.0000
374 R A -0.9131
375 I A 0.0000
376 D A 0.0000
377 E A 0.0000
378 V A 0.0000
379 A A 0.0000
380 V A 0.0000
381 P A 0.0000
382 V A -0.5622
383 H A -0.6665
384 V A -0.0906
385 A A 0.0000
386 K A 0.3308
387 I A 1.7722
388 L A 0.0000
389 T A 0.0000
390 F A 0.0000
391 P A -0.7191
392 E A -1.3024
393 K A -2.0797
394 V A 0.0000
395 N A -1.6132
396 K A -2.0712
397 A A -0.9951
398 N A 0.0000
399 I A -1.4422
400 N A -1.9500
401 F A -0.7486
402 L A 0.0000
403 R A -2.9040
404 K A -2.7270
405 L A 0.0000
406 V A 0.0000
407 Q A -2.3635
408 N A -1.5827
409 G A 0.0000
410 P A -0.4293
411 E A -1.3176
412 V A -0.4215
413 H A -0.2490
414 P A -0.7461
415 G A 0.0000
416 A A 0.0000
417 N A -0.1696
418 F A -0.2733
419 I A 0.0000
420 Q A -1.9178
421 Q A -2.6955
422 R A -2.4538
423 H A -2.0350
424 T A -1.7056
425 Q A -1.6581
426 M A -0.8961
427 K A -1.9930
428 R A -1.8663
429 F A -0.1519
430 L A 0.0000
431 K A -0.8676
432 Y A 0.1842
433 G A -1.2606
434 N A -2.4288
435 R A -2.7964
436 E A -3.5218
437 K A -3.8182
438 M A 0.0000
439 A A 0.0000
440 Q A -3.6392
441 E A -3.3466
442 L A 0.0000
443 K A -1.7706
444 Y A -0.5212
445 G A -1.2055
446 D A 0.0000
447 I A -1.1582
448 V A 0.0000
449 E A 0.0000
450 R A 0.0000
451 H A 0.0000
452 L A 0.0000
453 I A -0.8348
454 D A -2.1794
455 G A -1.2972
456 D A 0.0000
457 V A 0.0000
458 V A 0.0000
459 L A 0.3124
460 F A 0.0000
461 N A -0.9967
462 R A -1.7160
463 Q A -2.0047
464 P A -1.0764
465 S A -0.8773
466 L A -0.4357
467 H A -0.4720
468 K A -0.7317
469 L A 0.0000
470 S A 0.0000
471 I A 0.0086
472 M A 0.0000
473 A A 0.0000
474 H A 0.0000
475 L A -0.2744
476 A A 0.0000
477 R A -1.7188
478 V A -1.3398
479 K A -1.8783
480 P A -1.4798
481 H A -2.2946
482 R A -2.4935
483 T A -1.7925
484 F A 0.0000
485 R A -1.1982
486 F A 0.0000
487 N A 0.0000
488 E A -0.8396
489 C A 0.0000
490 V A 0.0000
491 C A -0.6972
492 T A -0.6238
493 P A 0.0000
494 Y A 0.0000
495 N A -1.6700
496 A A -2.0733
497 D A -2.8747
498 F A -2.1926
499 D A -2.7018
500 G A -1.8966
501 D A -2.1577
502 E A -2.7650
503 M A 0.0000
504 N A -1.5848
505 L A 0.0000
506 H A -0.4687
507 L A 0.0000
508 P A -1.0750
509 Q A -1.2605
510 T A -1.9427
511 E A -3.1951
512 E A -3.0219
513 A A -1.7117
514 K A -1.1879
515 A A -0.7552
516 E A -0.5406
517 A A 0.0000
518 L A 1.3444
519 V A 2.2650
520 L A 1.9540
521 M A 1.2208
522 G A 0.0000
523 T A 0.0000
524 K A -0.8198
525 A A 0.1117
526 N A 0.0000
527 L A 0.0000
528 V A 0.0000
529 T A 0.0000
530 P A -0.3768
531 R A -0.6257
532 N A -1.0751
533 G A 0.0000
534 E A -0.7600
535 P A 0.0000
536 L A -0.0632
537 I A 0.0000
538 A A 0.0000
539 A A 0.0000
540 I A -0.5964
541 Q A -1.2719
542 D A -0.9459
543 F A 0.0000
544 L A 0.0000
545 T A 0.0000
546 G A 0.0000
547 A A 0.0000
548 Y A 0.0652
549 L A 0.0000
550 L A 0.0000
551 T A 0.0000
552 L A -1.2113
553 K A -2.4636
554 D A -2.2216
555 T A -0.8246
556 F A -0.1523
557 F A 0.0000
558 D A -2.3792
559 R A -2.8968
560 A A -1.9193
561 K A -2.1090
562 A A 0.0000
563 C A -1.2243
564 Q A -1.6564
565 I A 0.0000
566 I A 0.0000
567 A A -0.5276
568 S A -0.3001
569 I A 0.0000
570 L A -1.1340
571 V A -1.2463
572 G A -2.0334
573 K A -2.5949
574 D A 0.0000
575 E A -3.1052
576 K A -3.0735
577 I A -2.2014
578 K A -2.3455
579 V A -1.0335
580 R A -0.7318
581 L A -0.4494
582 P A 0.0000
583 P A -0.2147
584 P A 0.0943
585 T A 0.6169
586 I A 1.0390
587 L A 1.1901
588 K A -0.6037
589 P A -0.1279
590 V A 0.6060
591 T A 0.1256
592 L A -0.1316
593 W A 0.0000
594 T A -0.4131
595 G A 0.0000
596 K A 0.0000
597 Q A -0.0104
598 I A 0.0000
599 F A 0.0000
600 S A 0.0000
601 V A 0.0000
602 I A 0.0000
603 L A 0.0000
604 R A -1.1255
605 P A 0.0000
606 S A -1.6529
607 D A -2.4102
608 D A -2.6707
609 N A -1.6857
610 P A -1.1193
611 V A 0.0000
612 R A -0.6904
613 A A 0.0000
614 N A 0.0000
615 L A 0.0000
616 R A -2.0009
617 T A -1.9937
618 K A -2.6721
619 G A 0.0000
620 K A -1.7525
621 Q A -1.2272
622 Y A -1.7802
623 C A -1.2187
624 G A -1.7109
625 K A -2.2976
626 G A 0.0000
627 E A -2.9837
628 D A -2.3226
629 L A -0.2885
630 C A -1.1696
631 A A -0.7890
632 N A -1.2021
633 D A -1.3562
634 S A 0.0000
635 Y A -1.8117
636 V A 0.0000
637 T A 0.0000
638 I A 0.0000
639 Q A -0.6963
640 N A -0.6569
641 S A 0.0000
642 E A -0.4996
643 L A 0.0000
644 M A 0.4955
645 S A -0.1620
646 G A 0.0000
647 S A 0.0000
648 M A 0.0000
649 D A 0.0000
650 K A -1.2369
651 G A -1.4399
652 T A 0.0000
653 L A 0.0000
654 G A 0.0000
655 S A -0.4578
656 G A -0.8999
657 S A -0.9001
658 K A -1.1349
659 N A -1.2707
660 N A 0.0000
661 I A 0.0000
662 F A 0.0000
663 Y A 0.0000
664 I A 0.0000
665 L A 0.0000
666 L A -0.7610
667 R A -0.6630
668 D A -0.6214
669 W A -0.5877
670 G A -1.0748
671 Q A -1.8289
672 N A -1.9867
673 E A -1.4085
674 A A 0.0000
675 A A 0.0000
676 D A -0.9143
677 A A 0.0000
678 M A 0.0000
679 S A -0.6174
680 R A 0.0000
681 L A 0.0000
682 A A 0.0000
683 R A -0.8287
684 L A 0.0000
685 A A 0.0000
686 P A -0.5709
687 V A -0.5752
688 Y A 0.0000
689 L A -0.8605
690 S A -1.1662
691 N A -2.0735
692 R A -2.1281
693 G A -1.2393
694 F A -0.0495
695 S A 0.6358
696 I A 1.8080
697 G A 1.2775
698 I A 2.0398
699 G A 0.4394
700 D A 0.3747
701 V A 1.0554
702 T A 0.3526
703 P A -0.1731
704 G A -1.6058
705 Q A -1.9236
706 G A -1.9058
707 L A 0.0000
708 L A -0.9448
709 K A -1.9286
710 A A -1.3683
711 K A 0.0000
712 Y A -0.1696
713 E A -1.7158
714 L A -1.2258
715 L A -0.6472
716 N A -1.7981
717 A A -1.4351
718 G A 0.0000
719 Y A -1.9551
720 K A -3.3185
721 K A -3.4552
722 C A 0.0000
723 D A -3.4636
724 E A -3.9263
725 Y A -2.7586
726 I A 0.0000
727 E A -3.5896
728 A A -2.7203
729 L A -2.9030
730 N A -2.7189
731 T A -1.6703
732 G A -1.9261
733 K A -2.7218
734 L A 0.0000
735 Q A -2.3737
736 Q A -3.0177
737 Q A -2.2370
738 P A -1.1052
739 G A -0.9536
740 C A -1.2783
741 T A -1.7470
742 A A -2.7056
743 E A -3.1588
744 E A -3.0581
745 T A 0.0000
746 L A 0.0000
747 E A -1.4050
748 A A -1.2502
749 L A -1.3015
750 I A 0.0000
751 L A -0.4473
752 K A -1.4552
753 E A -1.2294
754 L A 0.0000
755 S A -1.0487
756 V A -0.7309
757 I A 0.0000
758 R A -1.3423
759 D A -1.7402
760 H A -1.6096
761 A A 0.0000
762 G A 0.0000
763 S A -1.0327
764 A A -1.6243
765 C A 0.0000
766 L A -0.7282
767 R A -2.6332
768 E A -2.5852
769 L A -2.0840
770 D A -3.0838
771 K A -2.8497
772 S A -1.3297
773 N A 0.0000
774 S A 0.0038
775 P A -0.0042
776 L A -0.3740
777 T A 0.0000
778 M A 0.0000
779 A A 0.0000
780 L A -0.3376
781 C A 0.0000
782 G A -1.2096
783 S A 0.0000
784 K A -2.3056
785 G A -1.1604
786 S A -0.0449
787 F A 1.2787
788 I A 1.3976
789 N A -0.2675
790 I A 0.0000
791 S A 0.0000
792 Q A 0.1363
793 M A 0.6700
794 I A 0.0000
795 A A 0.0000
796 C A 0.0000
797 V A 0.0000
798 G A 0.0000
799 Q A -0.4679
800 Q A -0.3737
801 A A -0.3503
802 I A -0.4682
803 S A -0.6363
804 G A -0.7591
805 S A -0.4322
806 R A 0.0000
807 V A 0.0000
808 P A -1.2520
809 D A -2.8044
810 G A -1.3884
811 F A -0.9308
812 E A -2.5566
813 N A -3.1244
814 R A -3.2094
815 S A 0.0000
816 L A 0.0000
817 P A -1.3838
818 H A -1.6393
819 F A -1.9686
820 E A -3.2345
821 K A -3.9415
822 H A -3.1830
823 S A -1.8219
824 K A -1.6183
825 L A -0.3358
826 P A 0.0000
827 A A 0.0308
828 A A 0.0000
829 K A -0.7701
830 G A 0.0000
831 F A 0.0000
832 V A 0.0000
833 A A -0.0616
834 N A -0.1363
835 S A 0.0000
836 F A 1.1014
837 Y A 1.1856
838 S A 0.2270
839 G A 0.3423
840 L A 0.0000
841 T A 0.2653
842 P A 0.4219
843 T A 0.3572
844 E A 0.0000
845 F A 1.7221
846 F A 1.2914
847 F A 0.0000
848 H A 0.1128
849 T A -0.1444
850 M A -0.1425
851 A A -0.5164
852 G A -0.8170
853 R A -1.5002
854 E A -0.8728
855 G A -0.2596
856 L A 0.9778
857 V A 0.9562
858 D A 0.3058
859 T A 0.3211
860 A A 0.7717
861 V A 0.6820
862 K A -0.2102
863 T A -0.0493
864 A A 0.1031
865 E A -0.3385
866 T A 0.0000
867 G A -0.2545
868 Y A 0.1239
869 M A 0.0000
870 Q A -1.1567
871 R A -2.0638
872 R A -2.0551
873 L A 0.0000
874 V A -1.1567
875 K A -1.8551
876 S A 0.0000
877 L A 0.0000
878 E A -0.7091
879 D A 0.0000
880 L A 0.0000
881 C A 0.0000
882 S A 0.0000
883 Q A 0.1593
884 Y A 0.5986
885 D A -0.4408
886 L A -0.0263
887 T A 0.0000
888 V A 0.0000
889 R A -0.5163
890 S A -0.7636
891 S A -0.6723
892 T A -0.7818
893 G A -0.9244
894 D A -1.3109
895 I A -0.0374
896 I A 0.0000
897 Q A 0.0000
898 F A 1.9136
899 I A 1.0018
900 Y A 0.0000
901 G A 0.0000
902 G A -0.0771
903 D A -0.4879
904 G A 0.0000
905 L A 0.0000
906 D A -1.4107
907 P A 0.0000
908 A A -0.4592
909 A A -0.9949
910 M A 0.0000
911 E A 0.0000
912 G A -2.3653
913 K A -3.1941
914 D A -3.4258
915 E A -3.1780
916 P A 0.0000
917 L A 0.0000
918 E A -1.8842
919 F A 0.0000
920 K A -2.0913
921 R A -1.6413
922 V A 0.0000
923 L A 0.0000
924 D A -1.2145
925 N A 0.0000
926 I A 0.0000
927 K A -0.5643
928 A A -0.2836
929 V A 0.1017
930 F A 0.3911
931 P A -0.0822
932 C A -0.3076
933 P A -0.6518
934 S A -0.6354
935 E A -0.8365
936 P A -0.8061
937 A A -1.0677
938 L A 0.0000
939 S A 0.0000
940 K A -2.7953
941 N A -2.1864
942 E A -1.5442
943 L A 0.0000
944 I A -1.0160
945 L A 0.3856
946 T A -0.1733
947 T A 0.0000
948 E A -1.2609
949 S A -0.8955
950 I A -1.5304
951 M A 0.0000
952 K A -2.6964
953 K A -2.7704
954 S A -1.6299
955 E A -2.2460
956 F A 0.0000
957 L A 0.1050
958 C A 0.2413
959 C A 0.0000
960 Q A -1.4468
961 D A -2.4048
962 S A -2.1222
963 F A 0.0000
964 L A -1.9995
965 Q A -2.9907
966 E A -3.2882
967 I A 0.0000
968 K A -2.6906
969 K A -3.2634
970 F A -2.2201
971 I A 0.0000
972 K A -3.1808
973 G A -2.5183
974 V A -2.2763
975 S A 0.0000
976 E A -3.9847
977 K A -3.7021
978 I A 0.0000
979 K A -3.7967
980 K A -4.1428
981 T A -2.6399
982 R A 0.0000
983 D A -3.5419
984 K A -2.9188
985 Y A -1.1358
986 G A -1.6560
987 I A 0.0000
988 N A -2.3764
989 D A -2.9158
990 N A -2.2372
991 G A -2.0148
992 T A -1.7162
993 T A -1.8861
994 E A -2.2939
995 P A -1.2567
996 R A -1.7661
997 V A 0.4726
998 L A 0.0621
999 Y A 0.0000
1000 Q A -0.5622
1001 L A 0.5893
1002 D A -0.5396
1003 R A -0.4586
1004 I A 0.0000
1005 T A 0.0000
1006 P A -0.6625
1007 T A -0.5790
1008 Q A 0.0000
1009 V A 0.0000
1010 E A -1.3334
1011 K A -1.1733
1012 F A 0.0000
1013 L A 0.0000
1014 E A -1.6305
1015 T A -1.1549
1016 C A 0.0000
1017 R A -1.2655
1018 D A -1.9523
1019 K A -1.5006
1020 Y A 0.0000
1021 M A -1.0931
1022 R A -2.4010
1023 A A 0.0000
1024 Q A -1.3732
1025 M A 0.0000
1026 E A -2.1506
1027 P A -0.5201
1028 G A 0.0000
1029 S A -0.6046
1030 A A -0.3881
1031 V A 0.0000
1032 G A 0.0000
1033 A A -0.3179
1034 L A -0.0758
1035 C A 0.0000
1036 A A 0.0000
1037 Q A -0.6464
1038 S A 0.0000
1039 I A 0.0000
1040 G A 0.0000
1041 E A -0.5161
1042 P A 0.0000
1043 G A 0.0000
1044 T A -0.6524
1045 Q A -0.9984
1046 M A 0.0000
1047 T A -0.6620
1048 L A -0.2420
1049 K A -1.3204
1050 T A -0.8103
1051 F A -0.1776
1052 H A -0.8320
1053 F A -0.1876
1054 A A -0.4181
1055 G A -0.3805
1056 V A 0.0000
1057 A A -0.4276
1058 S A -0.6948
1059 M A 0.0000
1060 N A -1.1175
1061 I A -0.3618
1062 T A -0.2667
1063 L A 0.0000
1064 G A 0.0000
1065 V A 0.0000
1066 P A -0.2599
1067 R A 0.0000
1068 I A 0.0000
1069 K A -0.5824
1070 E A -0.7511
1071 I A 0.0000
1072 I A 0.0000
1073 N A -0.7119
1074 A A -0.7172
1075 S A -0.9546
1076 K A -1.6739
1077 A A -1.0498
1078 I A -0.5418
1079 S A -0.2282
1080 T A -0.3445
1081 P A -0.7156
1082 I A 0.0000
1083 I A 0.0000
1084 T A -0.5790
1085 A A 0.0000
1086 Q A -1.9628
1087 L A 0.0000
1088 D A -3.6912
1089 K A -3.8265
1090 D A -3.5919
1091 D A -4.3569
1092 D A -3.6776
1093 A A -2.4026
1094 D A -2.6279
1095 Y A -2.3461
1096 A A 0.0000
1097 R A -2.5747
1098 L A -1.4954
1099 V A 0.0000
1100 K A -1.5993
1101 G A -1.6628
1102 R A -1.6880
1103 I A 0.0000
1104 E A -1.4283
1105 K A -1.3758
1106 T A -0.9373
1107 L A -0.9080
1108 L A 0.0000
1109 G A -1.7797
1110 E A -1.9677
1111 I A 0.0000
1112 S A -1.6357
1113 E A -2.4436
1114 Y A -1.1241
1115 I A 0.0000
1116 E A -1.3805
1117 E A -0.8201
1118 V A 0.7839
1119 F A 1.5933
1120 L A 0.6931
1121 P A -0.6854
1122 D A -2.1169
1123 D A -1.7558
1124 C A -0.1474
1125 F A 0.1264
1126 I A 0.0000
1127 L A -0.2787
1128 V A 0.0000
1129 K A -1.4329
1130 L A 0.0000
1131 S A -2.1919
1132 L A -1.9994
1133 E A -2.8577
1134 R A -2.7353
1135 I A 0.0000
1136 R A -2.9102
1137 L A -0.6022
1138 L A -1.4237
1139 R A -2.9496
1140 L A 0.0000
1141 E A -2.6918
1142 V A 0.0000
1143 N A -1.9250
1144 A A 0.0000
1145 E A -1.2836
1146 T A -0.8075
1147 V A 0.0000
1148 R A -0.2038
1149 Y A 0.7293
1150 S A 0.3329
1151 I A 0.0000
1152 C A 0.0000
1153 T A -0.6221
1154 S A -1.2237
1155 K A -1.2286
1156 L A -1.6321
1157 R A -2.9258
1158 V A 0.0000
1159 K A -2.8039
1160 P A -1.4511
1161 G A -1.2290
1162 D A -1.3512
1163 V A 0.0000
1164 A A -0.1509
1165 V A -0.5881
1166 H A -1.2219
1167 G A -1.5014
1168 E A -2.2800
1169 A A -1.6904
1170 V A -0.9314
1171 V A 0.0000
1172 C A 0.0000
1173 V A 0.0000
1174 T A -0.8187
1175 P A -1.1236
1176 R A -2.0133
1177 E A -2.0307
1178 N A -1.8512
1179 S A -1.7604
1180 K A -2.1519
1181 S A -1.2065
1182 S A -0.3058
1183 M A 0.9268
1184 Y A 1.1710
1185 Y A 1.3925
1186 V A 0.4339
1187 L A 0.0000
1188 Q A -1.3440
1189 F A -0.6426
1190 L A 0.0000
1191 K A -2.3246
1192 E A -2.7678
1193 D A -1.9384
1194 L A 0.0000
1195 P A -1.6923
1196 K A -2.2271
1197 V A 0.0000
1198 V A -0.3547
1199 V A 0.0000
1200 Q A -0.7763
1201 G A -1.1262
1202 I A 0.0000
1203 P A -1.2218
1204 E A -2.2242
1205 V A 0.0000
1206 S A -1.4015
1207 R A -1.2671
1208 A A 0.0000
1209 V A -0.4634
1210 I A -0.3813
1211 H A -0.1406
1212 I A -0.6551
1213 D A -2.3246
1214 E A -3.2567
1215 Q A -3.2556
1216 S A -2.3381
1217 G A -2.3737
1218 K A -4.0160
1219 E A -4.3179
1220 K A -3.7235
1221 Y A -2.4554
1222 K A -1.8899
1223 L A 0.0000
1224 L A 0.0000
1225 V A 0.0000
1226 E A -1.2852
1227 G A 0.0000
1228 D A -2.6200
1229 N A -2.0895
1230 L A 0.0000
1231 R A -2.1966
1232 A A -1.4244
1233 V A 0.0000
1234 M A -1.2350
1235 A A -0.8171
1236 T A -1.0038
1237 H A -1.4168
1238 G A -1.7665
1239 V A 0.0000
1240 K A -2.5822
1241 G A -1.7599
1242 T A -1.1886
1243 R A -2.4046
1244 T A 0.0000
1245 T A -0.6875
1246 S A 0.0000
1247 N A -0.2352
1248 N A 0.0000
1249 T A 0.0000
1250 Y A -0.8991
1251 E A -1.4909
1252 V A 0.0000
1253 E A -1.5365
1254 K A -1.7495
1255 T A -0.9773
1256 L A -0.3965
1257 G A -1.0443
1258 I A -1.5145
1259 E A -2.0537
1260 A A -1.0444
1261 A A 0.0000
1262 R A -1.4477
1263 T A -1.0097
1264 T A 0.0000
1265 I A 0.0000
1266 I A 0.0000
1267 N A -1.0056
1268 E A -0.3287
1269 I A 0.0000
1270 Q A -0.0317
1271 Y A 0.5121
1272 T A 0.0000
1273 M A 0.0000
1274 V A 1.5362
1275 N A 0.4372
1276 H A -0.0987
1277 G A -0.0420
1278 M A 0.1966
1279 S A 0.0120
1280 I A 0.0000
1281 D A 0.0000
1282 R A -1.3624
1283 R A 0.0000
1284 H A 0.0000
1285 V A 0.0000
1286 M A -0.3623
1287 L A 0.0000
1288 L A 0.0000
1289 S A 0.0000
1290 D A -0.5337
1291 L A 0.0000
1292 M A 0.0000
1293 T A 0.0000
1294 Y A -1.1432
1295 K A -1.9717
1296 G A -1.9426
1297 E A -2.4122
1298 V A -1.3118
1299 L A 0.0000
1300 G A 0.0000
1301 I A 0.0000
1302 T A -0.5475
1303 R A -0.8215
1304 F A 1.0308
1305 G A 0.0000
1306 L A 0.0000
1307 A A -0.3389
1308 K A -0.9166
1309 M A 0.0000
1310 K A -1.0962
1311 E A -1.5740
1312 S A 0.0000
1313 V A 0.0000
1314 L A 0.0000
1315 M A 0.0000
1316 L A 0.0000
1317 A A 0.0000
1318 S A -1.2620
1319 F A -0.8459
1320 E A -1.6842
1321 K A -2.4704
1322 T A -1.8911
1323 A A 0.0000
1324 D A -2.2197
1325 H A 0.0000
1326 L A 0.0000
1327 F A -0.7618
1328 D A -0.8596
1329 A A 0.0000
1330 A A 0.0000
1331 Y A 0.0000
1332 F A 0.0000
1333 G A -0.8447
1334 Q A -0.9031
1335 K A -1.3946
1336 D A 0.0000
1337 S A -0.5961
1338 V A 0.0000
1339 C A 0.3431
1340 G A 0.0000
1341 V A 0.0000
1342 S A 0.6723
1343 E A 0.0000
1344 C A 0.0000
1345 I A 2.2185
1346 I A 1.2402
1347 M A 0.9443
1348 G A 0.4609
1349 I A 0.2452
1350 P A 0.0451
1351 M A 0.2104
1352 N A -0.5112
1353 I A -0.1286
1354 G A -0.3508
1355 T A -0.3571
1356 G A -0.2146
1357 L A 0.3103
1358 F A 1.1991
1359 K A 0.0425
1360 L A 1.3901
1361 L A 1.1530
1362 H A -0.9339
1363 K A -2.3236
1364 A A -2.5727
1365 D A -3.6104
1366 R A -4.0724
1367 D A -3.5578
1368 P A -2.5016
1369 N A -2.4035
1370 P A -2.3483
1371 P A -2.1367
1372 K A -2.8838
1373 R A -2.4111
1374 P A -0.6214
1375 L A 1.2667
1376 I A 2.5940
1377 F A 2.1841
1378 D A -0.2902
1379 T A -0.2378
1380 N A -1.3120
1381 E A -0.9738
1382 F A 1.1428
1383 H A 0.0364
1384 I A 1.8027
1385 P A 1.8501
1386 L A 2.6515
1387 V A 2.6733
1388 T A 1.0780
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.7775 6.575 View CSV PDB
4.5 -0.8418 6.3542 View CSV PDB
5.0 -0.9201 6.0931 View CSV PDB
5.5 -0.9953 5.8171 View CSV PDB
6.0 -1.0483 5.5496 View CSV PDB
6.5 -1.0659 5.3069 View CSV PDB
7.0 -1.0492 5.0896 View CSV PDB
7.5 -1.0101 4.8866 View CSV PDB
8.0 -0.9592 4.7888 View CSV PDB
8.5 -0.9002 4.7891 View CSV PDB
9.0 -0.8332 4.7892 View CSV PDB