Chain sequence(s) |
A: MKLPIIFLTLLIFVSSCTSTLINGSSDEERTYSFSPTTSPFDPRSLNQELKIGRIGYCFDCARACMRRGKYIRTCSFERKLCRCSISDIK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.8936 | |
2 | K | A | 0.6407 | |
3 | L | A | 2.7741 | |
4 | P | A | 2.8166 | |
5 | I | A | 4.3441 | |
6 | I | A | 5.0479 | |
7 | F | A | 5.5342 | |
8 | L | A | 5.6653 | |
9 | T | A | 5.0459 | |
10 | L | A | 5.9027 | |
11 | L | A | 5.6399 | |
12 | I | A | 5.2812 | |
13 | F | A | 4.9820 | |
14 | V | A | 4.2601 | |
15 | S | A | 2.6213 | |
16 | S | A | 1.7923 | |
17 | C | A | 1.8400 | |
18 | T | A | 1.1299 | |
19 | S | A | 0.6904 | |
20 | T | A | 0.9838 | |
21 | L | A | 2.1397 | |
22 | I | A | 1.9308 | |
23 | N | A | -0.3310 | |
24 | G | A | -0.7797 | |
25 | S | A | -1.7514 | |
26 | S | A | -2.5264 | |
27 | D | A | -3.6222 | |
28 | E | A | -4.2714 | |
29 | E | A | -3.9571 | |
30 | R | A | -3.1900 | |
31 | T | A | -0.9674 | |
32 | Y | A | 0.8728 | |
33 | S | A | 0.9820 | |
34 | F | A | 2.0478 | |
35 | S | A | 0.7007 | |
36 | P | A | 0.2558 | |
37 | T | A | -0.0882 | |
38 | T | A | -0.1321 | |
39 | S | A | -0.1656 | |
40 | P | A | 0.0956 | |
41 | F | A | 0.9186 | |
42 | D | A | -1.2310 | |
43 | P | A | -1.3600 | |
44 | R | A | -2.6994 | |
45 | S | A | -1.8976 | |
46 | L | A | -0.6148 | |
47 | N | A | -2.4918 | |
48 | Q | A | -2.7362 | |
49 | E | A | -1.9693 | |
50 | L | A | -1.0542 | |
51 | K | A | -1.3489 | |
52 | I | A | 0.7106 | |
53 | G | A | -0.0360 | |
54 | R | A | -0.5822 | |
55 | I | A | 1.9657 | |
56 | G | A | 1.2130 | |
57 | Y | A | 0.2939 | |
58 | C | A | 1.0313 | |
59 | F | A | 1.5186 | |
60 | D | A | -0.5403 | |
61 | C | A | 0.0000 | |
62 | A | A | -0.1182 | |
63 | R | A | -1.1000 | |
64 | A | A | -1.2553 | |
65 | C | A | 0.0000 | |
66 | M | A | -0.7239 | |
67 | R | A | -2.4641 | |
68 | R | A | -2.6834 | |
69 | G | A | -1.5021 | |
70 | K | A | -0.9937 | |
71 | Y | A | 0.2366 | |
72 | I | A | 0.6481 | |
73 | R | A | -1.4115 | |
74 | T | A | -0.9564 | |
75 | C | A | -0.7293 | |
76 | S | A | -1.3989 | |
77 | F | A | -1.6789 | |
78 | E | A | -3.0532 | |
79 | R | A | -3.2171 | |
80 | K | A | -2.7859 | |
81 | L | A | -1.4419 | |
82 | C | A | -1.1524 | |
83 | R | A | -1.4964 | |
84 | C | A | -0.6311 | |
85 | S | A | 0.0000 | |
86 | I | A | 1.3358 | |
87 | S | A | -0.0546 | |
88 | D | A | -1.5396 | |
89 | I | A | -0.4528 | |
90 | K | A | -1.7118 |