Project name: DR_2J_PEP [mutate: VN3B, VQ7B, VT9B, VP12B, LQ13B, VN14B, RK15B, RK17B] [mutate: AQ5B]

Status: done

Started: 2026-04-17 12:00:10
Chain sequence(s) A: SSPSEGLCPPGHHISEDGRDCISCKYGQDYSTHWNDLLFCLRCTRCDSGEVELSPCTTTRNTVCQCEEGTFREEDSPEMCRKCRTGCPRGMVKVGDCTPWSDIECVHK
B: WCNYAYQRTRGPQNKYKRC
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Mutated residues AQ5B
Energy difference between WT (input) and mutated protein (by FoldX) 7.09829 kcal/mol

CAUTION: Your mutation/s can destabilize the protein structure

Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:00:52)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:00:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:00:57)
Show buried residues

Minimal score value
-3.7981
Maximal score value
0.9521
Average score
-1.2554
Total score value
-159.4345

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
21 S A -0.8938
22 S A -1.2338
23 P A -1.3927
24 S A -1.2424
25 E A -2.1265
26 G A -1.6864
27 L A -1.0382
28 C A 0.0000
29 P A -0.2309
30 P A -0.3267
31 G A 0.0000
32 H A -0.4458
33 H A -0.2256
34 I A -1.1863
35 S A 0.0000
36 E A -2.9158
37 D A -3.5799
38 G A -3.0285
39 R A -3.7445
40 D A -3.1676
41 C A 0.0000
42 I A -0.2023
43 S A -0.1301
44 C A 0.0000
45 K A -1.5470
46 Y A -0.1779
47 G A -1.1261
48 Q A -1.9094
49 D A -1.4605
50 Y A 0.0000
51 S A -0.6238
52 T A -0.6631
53 H A -0.7830
54 W A -0.1936
55 N A 0.0000
56 D A -1.4863
57 L A -0.0646
58 L A 0.1850
59 F A -0.0015
60 C A 0.0000
61 L A -0.2714
62 R A -1.0741
63 C A 0.0000
64 T A -1.6956
65 R A -2.6337
66 C A 0.0000
67 D A -2.5669
68 S A -1.3154
69 G A -1.5971
70 E A -1.7098
71 V A -0.8454
72 E A -0.6431
73 L A 0.6805
74 S A -0.0921
75 P A -0.5423
76 C A 0.0000
77 T A -0.5579
78 T A -0.7450
79 T A -0.8757
80 R A -1.0535
81 N A 0.0000
82 T A 0.0000
83 V A 0.0000
84 C A 0.0000
85 Q A -0.9357
86 C A 0.0000
87 E A -3.1847
88 E A -2.9094
89 G A -2.6848
90 T A 0.0000
91 F A 0.0000
92 R A 0.0000
93 E A -2.6812
94 E A -3.7981
95 D A -3.0857
96 S A -2.3959
97 P A -2.5518
98 E A -2.4938
99 M A -0.5166
100 C A -1.5044
101 R A -2.9030
102 K A -3.4846
103 C A -2.8832
104 R A -3.2637
105 T A -2.4105
106 G A -1.4539
107 C A -1.3242
108 P A -1.3538
109 R A -2.4775
110 G A -1.7720
111 M A -1.4594
112 V A -1.1176
113 K A -2.3260
114 V A -1.0915
115 G A -1.7254
116 D A -2.7494
117 C A -2.0205
118 T A -1.3062
119 P A -1.6186
120 W A -0.8871
121 S A -1.3469
122 D A -2.0580
123 I A -2.5205
124 E A -2.6643
125 C A -1.4911
126 V A -0.5850
127 H A -1.7212
128 K A -2.1184
1 W B 0.9521
2 C B 0.0155
3 N B -1.2178
4 Y B -1.2203
5 Q B 0.0000 mutated: AQ5B
6 Y B -1.6748
7 Q B 0.0000
8 R B -1.7729
9 T B 0.0000
10 R B -1.4935
11 G B -1.1352
12 P B -1.7997
13 Q B -2.2109
14 N B -2.5231
15 K B -2.3466
16 Y B 0.0000
17 K B -2.2105
18 R B -1.7595
19 C B 0.0264
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