Project name: c3d172bfdbbc957 [mutate: LK19D, VQ91D, MD104D]

Status: done

Started: 2025-03-20 08:41:32
Chain sequence(s) D: TSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFAQSIISTLT
input PDB
Selected Chain(s) D
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations No
alphaCutter usage No
Dynamic mode No
Automated mutations No
Mutated residues MD104D,LK19D,VQ91D
Energy difference between WT (input) and mutated protein (by FoldX) -0.308562 kcal/mol
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with D chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:01)
[INFO]       FoldX:    Building mutant model                                                       (00:02:36)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:03:01)
[INFO]       Main:     Simulation completed successfully.                                          (00:03:02)
Show buried residues

Minimal score value
-3.5575
Maximal score value
0.0366
Average score
-1.179
Total score value
-154.4508

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
3 T D -0.7120
4 S D -1.0924
5 S D -1.5189
6 S D -1.5191
7 T D -1.5080
8 K D -2.5024
9 K D -2.6260
10 T D -1.7906
11 Q D -1.4606
12 L D -1.0259
13 Q D -1.5471
14 L D 0.0000
15 E D -1.8993
16 H D -2.0222
17 L D 0.0000
18 L D 0.0000
19 K D -2.3726 mutated: LK19D
20 D D -1.4354
21 L D 0.0000
22 Q D -1.3475
23 M D -0.6838
24 I D 0.0000
25 L D -1.0727
26 N D -1.4229
27 G D 0.0000
28 I D 0.0000
29 N D -1.3649
30 N D -1.1192
31 Y D 0.0366
32 K D -1.5815
33 N D 0.0000
34 P D -1.1789
35 K D -1.5016
36 L D -0.9371
37 T D -1.0202
38 R D -1.7508
39 M D 0.0000
40 L D -0.4053
41 T D -0.5029
42 F D -0.4613
43 K D -1.2913
44 F D 0.0000
45 Y D -0.3705
46 M D 0.0000
47 P D 0.0000
48 K D -3.0665
49 K D -2.9105
50 A D -2.1325
51 T D -1.5643
52 E D -2.4374
53 L D -1.5930
54 K D -2.3241
55 H D -2.1999
56 L D 0.0000
57 Q D -1.4752
58 C D 0.0000
59 L D 0.0000
60 E D -1.7256
61 E D -2.2665
62 E D 0.0000
63 L D 0.0000
64 K D -2.8146
65 P D -1.9596
66 L D 0.0000
67 E D -2.6907
68 E D -2.6160
69 V D 0.0000
70 L D 0.0000
71 N D -1.8532
72 L D -0.5475
73 A D -0.9606
74 Q D -1.3992
75 S D -1.8527
76 K D -2.3758
77 N D -2.0793
78 F D -0.7496
79 H D -1.8367
80 L D -1.7327
81 R D -3.0913
82 P D 0.0000
83 R D -3.5575
84 D D -3.3899
85 L D 0.0000
86 I D 0.0000
87 S D -2.0782
88 N D -2.1043
89 I D 0.0000
90 N D -1.6217
91 Q D -1.7309 mutated: VQ91D
92 I D -1.2423
93 V D 0.0000
94 L D -0.9123
95 E D -1.8583
96 L D 0.0000
97 K D -1.6861
98 G D -1.5474
99 S D -1.6116
100 E D -2.1723
101 T D -1.4126
102 T D -1.1637
103 F D -1.4007
104 D D -2.0287 mutated: MD104D
105 C D -2.0738
106 E D -2.2197
107 Y D -1.5511
108 A D -2.1752
109 D D -2.7953
110 E D -2.7924
111 T D -1.5131
112 A D 0.0000
113 T D -0.6219
114 I D 0.0000
115 V D -1.0896
116 E D -1.9681
117 F D 0.0000
118 L D 0.0000
119 N D -1.7041
120 R D -1.6022
121 W D 0.0000
122 I D -1.1827
123 T D -0.8047
124 F D 0.0000
125 A D 0.0000
126 Q D -1.1522
127 S D -0.8082
128 I D 0.0000
129 I D -0.5039
130 S D -0.4093
131 T D -0.1700
132 L D -0.2621
133 T D -0.2694
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