Chain sequence(s) |
A: MADQYEQNKPSVEETVGANVEATDRGLFDFIGKKEEEKPSHAHEEEAISSEFCEKVKVSEEEEHKEKEKKEEKKLHRSSSSSSSSSDEEEEIGEDGQIIKKKKKKGLKEKIKEKISGDHKEEVKTEDTSVPVEKYEETEEKKGFLEKIKEKLPGGGHKKTEEVAAPPPPPPAAVDHEAEGKEKKGFLDKIKEKLPGYHSKTEEEKEKEKD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.5528 | |
2 | A | A | -0.3746 | |
3 | D | A | -1.9807 | |
4 | Q | A | -2.0330 | |
5 | Y | A | -1.1594 | |
6 | E | A | -2.9463 | |
7 | Q | A | -3.0855 | |
8 | N | A | -3.1157 | |
9 | K | A | -2.8521 | |
10 | P | A | -1.4140 | |
11 | S | A | -0.9963 | |
12 | V | A | -0.0965 | |
13 | E | A | -1.6892 | |
14 | E | A | -1.7625 | |
15 | T | A | -0.4624 | |
16 | V | A | 0.4938 | |
17 | G | A | 0.0594 | |
18 | A | A | -0.1297 | |
19 | N | A | -0.9063 | |
20 | V | A | 0.2129 | |
21 | E | A | -1.6353 | |
22 | A | A | -1.3550 | |
23 | T | A | -2.0996 | |
24 | D | A | -2.8698 | |
25 | R | A | -2.3569 | |
26 | G | A | -0.6659 | |
27 | L | A | 1.7028 | |
28 | F | A | 2.1794 | |
29 | D | A | -0.0729 | |
30 | F | A | 2.3231 | |
31 | I | A | 2.2064 | |
32 | G | A | -0.6921 | |
33 | K | A | -3.0371 | |
34 | K | A | -3.9093 | |
35 | E | A | -4.4782 | |
36 | E | A | -4.5843 | |
37 | E | A | -4.2380 | |
38 | K | A | -3.3254 | |
39 | P | A | -2.2463 | |
40 | S | A | -1.6203 | |
41 | H | A | -2.0276 | |
42 | A | A | -2.2487 | |
43 | H | A | -2.8578 | |
44 | E | A | -3.3839 | |
45 | E | A | -3.3438 | |
46 | E | A | -3.2196 | |
47 | A | A | -1.5620 | |
48 | I | A | 0.1711 | |
49 | S | A | -0.6112 | |
50 | S | A | -1.1219 | |
51 | E | A | -1.1847 | |
52 | F | A | 0.8795 | |
53 | C | A | 0.0674 | |
54 | E | A | -2.0627 | |
55 | K | A | -1.5219 | |
56 | V | A | 0.5184 | |
57 | K | A | -0.8086 | |
58 | V | A | 0.0940 | |
59 | S | A | -1.0250 | |
60 | E | A | -3.0910 | |
61 | E | A | -3.8195 | |
62 | E | A | -4.2301 | |
63 | E | A | -4.1299 | |
64 | H | A | -3.6884 | |
65 | K | A | -3.8918 | |
66 | E | A | -4.3370 | |
67 | K | A | -4.5744 | |
68 | E | A | -4.5722 | |
69 | K | A | -4.8223 | |
70 | K | A | -4.8710 | |
71 | E | A | -5.1170 | |
72 | E | A | -4.6454 | |
73 | K | A | -3.9134 | |
74 | K | A | -3.2728 | |
75 | L | A | -1.2940 | |
76 | H | A | -1.9821 | |
77 | R | A | -2.2611 | |
78 | S | A | -1.4000 | |
79 | S | A | -1.0064 | |
80 | S | A | -0.8433 | |
81 | S | A | -0.6118 | |
82 | S | A | -0.5995 | |
83 | S | A | -0.5936 | |
84 | S | A | -0.7576 | |
85 | S | A | -1.1611 | |
86 | S | A | -1.9082 | |
87 | D | A | -3.6094 | |
88 | E | A | -4.3606 | |
89 | E | A | -4.3933 | |
90 | E | A | -3.2146 | |
91 | E | A | -2.4988 | |
92 | I | A | 0.0482 | |
93 | G | A | -0.8882 | |
94 | E | A | -2.5698 | |
95 | D | A | -2.6373 | |
96 | G | A | -1.3113 | |
97 | Q | A | -0.7220 | |
98 | I | A | 0.9562 | |
99 | I | A | 0.7733 | |
100 | K | A | -2.3489 | |
101 | K | A | -3.3952 | |
102 | K | A | -4.2944 | |
103 | K | A | -4.6274 | |
104 | K | A | -3.8458 | |
105 | K | A | -3.5873 | |
106 | G | A | -2.1745 | |
107 | L | A | -0.8281 | |
108 | K | A | -2.8842 | |
109 | E | A | -3.7952 | |
110 | K | A | -3.0522 | |
111 | I | A | -1.1282 | |
112 | K | A | -3.0158 | |
113 | E | A | -3.9609 | |
114 | K | A | -2.7177 | |
115 | I | A | -0.3352 | |
116 | S | A | -1.5717 | |
117 | G | A | -2.6423 | |
118 | D | A | -3.5648 | |
119 | H | A | -3.5628 | |
120 | K | A | -3.9272 | |
121 | E | A | -3.8349 | |
122 | E | A | -2.8511 | |
123 | V | A | -0.8167 | |
124 | K | A | -2.2956 | |
125 | T | A | -1.9493 | |
126 | E | A | -2.9148 | |
127 | D | A | -2.9778 | |
128 | T | A | -1.0040 | |
129 | S | A | 0.3956 | |
130 | V | A | 1.8143 | |
131 | P | A | 0.6312 | |
132 | V | A | 0.9711 | |
133 | E | A | -1.4573 | |
134 | K | A | -2.2746 | |
135 | Y | A | -1.7625 | |
136 | E | A | -4.0538 | |
137 | E | A | -4.2283 | |
138 | T | A | -3.6409 | |
139 | E | A | -4.4620 | |
140 | E | A | -4.3791 | |
141 | K | A | -3.9175 | |
142 | K | A | -3.7032 | |
143 | G | A | -2.5280 | |
144 | F | A | -0.8071 | |
145 | L | A | -1.1923 | |
146 | E | A | -3.2963 | |
147 | K | A | -2.6424 | |
148 | I | A | -1.0164 | |
149 | K | A | -2.9331 | |
150 | E | A | -3.7360 | |
151 | K | A | -2.7505 | |
152 | L | A | -0.6961 | |
153 | P | A | -0.7293 | |
154 | G | A | -1.5762 | |
155 | G | A | -2.6874 | |
156 | G | A | -2.7003 | |
157 | H | A | -3.2542 | |
158 | K | A | -3.4888 | |
159 | K | A | -3.6985 | |
160 | T | A | -2.6319 | |
161 | E | A | -2.7523 | |
162 | E | A | -2.1349 | |
163 | V | A | 0.2469 | |
164 | A | A | 0.1298 | |
165 | A | A | -0.0676 | |
166 | P | A | -0.2250 | |
167 | P | A | -0.5647 | |
168 | P | A | -0.6464 | |
169 | P | A | -0.6380 | |
170 | P | A | -0.5678 | |
171 | P | A | -0.1695 | |
172 | A | A | 0.1206 | |
173 | A | A | 0.2543 | |
174 | V | A | 0.3718 | |
175 | D | A | -1.9293 | |
176 | H | A | -2.5045 | |
177 | E | A | -3.1451 | |
178 | A | A | -2.5360 | |
179 | E | A | -3.3694 | |
180 | G | A | -3.3351 | |
181 | K | A | -4.0543 | |
182 | E | A | -4.4620 | |
183 | K | A | -3.8756 | |
184 | K | A | -3.3367 | |
185 | G | A | -0.9715 | |
186 | F | A | 1.1217 | |
187 | L | A | 0.9225 | |
188 | D | A | -1.5655 | |
189 | K | A | -1.9124 | |
190 | I | A | -0.0647 | |
191 | K | A | -1.2072 | |
192 | E | A | -2.6570 | |
193 | K | A | -2.1997 | |
194 | L | A | -0.3402 | |
195 | P | A | -0.5041 | |
196 | G | A | -0.8419 | |
197 | Y | A | -0.7036 | |
198 | H | A | -2.0408 | |
199 | S | A | -2.5009 | |
200 | K | A | -3.6634 | |
201 | T | A | -3.2273 | |
202 | E | A | -4.4544 | |
203 | E | A | -5.3769 | |
204 | E | A | -5.8193 | |
205 | K | A | -5.9215 | |
206 | E | A | -5.9561 | |
207 | K | A | -5.6359 | |
208 | E | A | -5.1817 | |
209 | K | A | -4.6280 | |
210 | D | A | -3.7268 |