Project name: SepA

Status: done

Started: 2026-03-16 14:09:42
Chain sequence(s) A: ATVSAEIPYQIFRDFAENKGQFTPGTTNISIYDKQGNLVGKLDKAPMADFSSATITTGSLPPGDHTLYSPQYVVTAKHVSGSDTMSFGYAKNTYTAVGTNNNSGLDIKTRRLSKLVTEVAPAEVSDIGAVSGAYQAGGRFTEFYRLGGGMQYVKDKNGNRTQVYTNGGFLVGGTVSALNSYNNGQMITAQTGDIFNPANGPLANYLNMGDSGSPLFAYDSLQKKWVLIGVLSSGTNYGNNWVVTTQDFLGQQPQNDFDKTIAYTSGEGVLQWKYDAANGTGTLTQGNTTWDMHGKKGNDLNAGKNLLFTGNNGEVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTGEGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNPDNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVNTVSIFGGRGAPGDLYYDSSTKQYFILKASSYSPFFSDLNNSSVWQNVGKDRNKAIDTVKQQKIEASSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIFQGHPVIHAGTTTSSSQSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTVILGSSRVFTDRSDGTGNAVSSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIEAYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMPSAQKQGYYSPVISTTEGINLEDNASFSVKNMGYLSSDIHAGTTAATINLGDSDADAGKTDSPLFSSLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGDGKHFATLQVKELSADNTTFLMHTNNSRADQLNVTDKLSGSNNSVLVDFLNKPASEMSVTLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTDDATKWVLTGYQTT
B: ATVSAEIPYQIFRDFAENKGQFTPGTTNISIYDKQGNLVGKLDKAPMADFSSATITTGSLPPGDHTLYSPQYVVTAKHVSGSDTMSFGYAKNTYTAVGTNNNSGLDIKTRRLSKLVTEVAPAEVSDIGAVSGAYQAGGRFTEFYRLGGGMQYVKDKNGNRTQVYTNGGFLVGGTVSALNSYNNGQMITAQTGDIFNPANGPLANYLNMGDSGSPLFAYDSLQKKWVLIGVLSSGTNYGNNWVVTTQDFLGQQPQNDFDKTIAYTSGEGVLQWKYDAANGTGTLTQGNTTWDMHGKKGNDLNAGKNLLFTGNNGEVVLQNSVNQGAGYLQFAGDYRVSALNGQTWMGGGIITDKGTHVLWQVNGVAGDNLHKTGEGTLTVNGTGVNAGGLKVGDGTVILNQQADADGKVQAFSSVGIASGRPTVVLSDSQQVNPDNISWGYRGGRLELNGNNLTFTRLQAADYGAIITNNSEKKSTVTLDLQTLKASDINVPVNTVSIFGGRGAPGDLYYDSSTKQYFILKASSYSPFFSDLNNSSVWQNVGKDRNKAIDTVKQQKIEASSQPYMYHGQLNGNMDVNIPQLSGKDVLALDGSVNLPEGSITKKSGTLIFQGHPVIHAGTTTSSSQSDWETRQFTLEKLKLDAATFHLSRNGKMQGDINATNGSTVILGSSRVFTDRSDGTGNAVSSVEGSATATTVGDQSDYSGNVTLENKSSLQIMERFTGGIEAYDSTVSVTSQNAVFDRVGSFVNSSLTLGKGAKLTAQSGIFSTGAVDVKENASLTLTGMPSAQKQGYYSPVISTTEGINLEDNASFSVKNMGYLSSDIHAGTTAATINLGDSDADAGKTDSPLFSSLMKGYNAVLRGSITGAQSTVNMINALWYSDGKSEAGALKAKGSRIELGDGKHFATLQVKELSADNTTFLMHTNNSRADQLNVTDKLSGSNNSVLVDFLNKPASEMSVTLITAPKGSDEKTFTAGTQQIGFSNVTPVISTEKTDDATKWVLTGYQTT
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:09)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:09)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:20:05)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/c75b0541358b161/tmp/folded.pdb                (00:20:05)
[INFO]       Main:     Simulation completed successfully.                                          (00:30:33)
Show buried residues

Minimal score value
-4.3443
Maximal score value
3.7539
Average score
-0.7427
Total score value
-1494.2544

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 A A 0.0000
2 T A 0.0000
3 V A 0.0000
4 S A 0.0000
5 A A -1.1261
6 E A -1.2677
7 I A 0.0000
8 P A -0.7625
9 Y A -0.1678
10 Q A -0.3716
11 I A -0.0235
12 F A 0.0000
13 R A -0.4380
14 D A 0.0000
15 F A 0.0000
16 A A 0.0000
17 E A -0.5938
18 N A 0.0000
19 K A -0.6543
20 G A -0.7280
21 Q A -0.8734
22 F A 0.0000
23 T A -0.7936
24 P A -0.8607
25 G A -0.7473
26 T A -0.9697
27 T A -1.8834
28 N A -2.8634
29 I A 0.0000
30 S A -0.7781
31 I A 0.0000
32 Y A 0.2767
33 D A -1.1662
34 K A -2.4977
35 Q A -2.4152
36 G A -1.5658
37 N A -1.0044
38 L A 0.7875
39 V A 1.1316
40 G A -0.4230
41 K A -2.3921
42 L A 0.0000
43 D A -3.7823
44 K A -3.1168
45 A A 0.0000
46 P A -1.6738
47 M A 0.0000
48 A A 0.0000
49 D A -1.0943
50 F A 0.0000
51 S A -0.3136
52 S A 0.0000
53 A A 0.0000
54 T A 0.0000
55 I A 0.0950
56 T A -0.2217
57 T A 0.0000
58 G A -0.9971
59 S A -0.8078
60 L A -0.5240
61 P A -0.0951
62 P A 0.0321
63 G A 0.0000
64 D A 0.0000
65 H A 0.0000
66 T A 0.0000
67 L A 0.0000
68 Y A -0.4907
69 S A -0.3183
70 P A -0.1065
71 Q A 0.0000
72 Y A 0.0000
73 V A 0.0000
74 V A 0.0000
75 T A 0.0000
76 A A 0.0000
77 K A -1.2226
78 H A -0.9489
79 V A 0.0000
80 S A -0.6912
81 G A -0.9201
82 S A 0.0000
83 D A -1.8875
84 T A -1.0349
85 M A 0.0000
86 S A 0.0000
87 F A 0.0000
88 G A -0.3470
89 Y A 0.0000
90 A A -0.9590
91 K A -1.9387
92 N A -0.9560
93 T A -0.7039
94 Y A 0.0000
95 T A -0.5751
96 A A 0.0000
97 V A -0.3148
98 G A -0.3608
99 T A -0.5251
100 N A -1.0711
101 N A -1.7592
102 N A -1.2829
103 S A -0.9546
104 G A -0.8273
105 L A -0.8024
106 D A -0.9309
107 I A 0.0000
108 K A 0.0000
109 T A 0.0000
110 R A 0.0000
111 R A 0.0000
112 L A 0.0000
113 S A -0.0296
114 K A -0.2664
115 L A 0.0000
116 V A 0.0000
117 T A 0.0000
118 E A 0.0000
119 V A 0.0000
120 A A -0.4735
121 P A -0.4753
122 A A -0.9903
123 E A -2.2170
124 V A 0.0000
125 S A 0.0000
126 D A -2.2060
127 I A -0.3438
128 G A 0.0000
129 A A -0.2848
130 V A 0.9853
131 S A -0.4252
132 G A -0.5957
133 A A -0.3230
134 Y A 0.0000
135 Q A -1.5453
136 A A -1.0010
137 G A -0.9704
138 G A -1.1830
139 R A -0.6532
140 F A 0.0000
141 T A -0.7259
142 E A -0.8646
143 F A 0.0000
144 Y A 0.0000
145 R A 0.0000
146 L A 0.0000
147 G A 0.0000
148 G A 0.0000
149 G A 0.0000
150 M A 0.0000
151 Q A 0.0000
152 Y A 0.0000
153 V A -0.4528
154 K A -1.8020
155 D A -2.5153
156 K A -3.1698
157 N A -3.0069
158 G A -2.7617
159 N A -2.7094
160 R A -2.1037
161 T A -1.1788
162 Q A -0.4433
163 V A 0.0903
164 Y A 0.1796
165 T A 0.0000
166 N A -1.3616
167 G A -1.2820
168 G A -0.6658
169 F A -0.2959
170 L A 0.0000
171 V A 0.0000
172 G A 0.0000
173 G A 0.0000
174 T A 0.0000
175 V A 0.0000
176 S A -0.6553
177 A A -0.8448
178 L A 0.0000
179 N A -1.6070
180 S A -1.0191
181 Y A -0.8333
182 N A -1.7891
183 N A -1.7177
184 G A 0.0000
185 Q A -0.9589
186 M A 0.0000
187 I A 0.0000
188 T A -0.7642
189 A A 0.0000
190 Q A -1.5594
191 T A 0.0000
192 G A -0.9049
193 D A -2.1200
194 I A 0.0000
195 F A -0.6897
196 N A -1.2077
197 P A -0.5266
198 A A -0.5886
199 N A 0.0000
200 G A -0.3359
201 P A 0.0651
202 L A 0.0000
203 A A 0.0000
204 N A 0.0000
205 Y A 0.0000
206 L A 0.0000
207 N A -0.2386
208 M A -0.0355
209 G A 0.0003
210 D A 0.0000
211 S A -0.2362
212 G A 0.0000
213 S A 0.0000
214 P A 0.0000
215 L A 0.0000
216 F A 0.0000
217 A A 0.0000
218 Y A -0.7229
219 D A 0.0000
220 S A -0.6559
221 L A 0.4714
222 Q A -0.8996
223 K A -1.8958
224 K A -1.8884
225 W A -1.2395
226 V A 0.0000
227 L A 0.0000
228 I A 0.0000
229 G A 0.0000
230 V A 0.0000
231 L A 0.0000
232 S A -0.3592
233 S A -0.3516
234 G A -0.2912
235 T A -0.3586
236 N A -0.6947
237 Y A 0.1765
238 G A 0.0000
239 N A 0.0000
240 N A -0.4660
241 W A 0.0000
242 V A 0.0000
243 V A 0.0000
244 T A 0.0000
245 T A -1.1785
246 Q A -2.2695
247 D A -2.5651
248 F A 0.0000
249 L A 0.0000
250 G A -1.8156
251 Q A -2.1408
252 Q A 0.0000
253 P A -1.2844
254 Q A -2.0848
255 N A -2.0668
256 D A 0.0000
257 F A -1.0304
258 D A -1.6465
259 K A -1.9234
260 T A -0.8598
261 I A 0.0000
262 A A -0.3104
263 Y A -0.8816
264 T A -1.1234
265 S A -1.5354
266 G A -1.4007
267 E A -2.1761
268 G A -1.4380
269 V A -0.7008
270 L A 0.0000
271 Q A -0.8074
272 W A 0.0000
273 K A -2.1314
274 Y A 0.0000
275 D A -2.5287
276 A A -1.8554
277 A A -1.4890
278 N A -2.2289
279 G A 0.0000
280 T A -1.7784
281 G A -1.7300
282 T A -1.3929
283 L A 0.0000
284 T A -0.9061
285 Q A 0.0000
286 G A -1.6677
287 N A -1.7550
288 T A -0.8012
289 T A -0.7820
290 W A -1.0091
291 D A -1.8413
292 M A 0.0000
293 H A -1.4734
294 G A 0.0000
295 K A -2.1132
296 K A -2.7776
297 G A -2.3230
298 N A -2.4967
299 D A -2.4571
300 L A -1.2340
301 N A -1.0159
302 A A -1.3643
303 G A 0.0000
304 K A -0.7777
305 N A 0.0000
306 L A 0.0000
307 L A -0.0205
308 F A 0.0000
309 T A -0.5252
310 G A -1.3130
311 N A -2.5434
312 N A -2.8278
313 G A 0.0000
314 E A -1.9963
315 V A 0.0000
316 V A -0.2415
317 L A 0.0000
318 Q A -0.8595
319 N A -1.5268
320 S A -1.0329
321 V A 0.0000
322 N A -0.6092
323 Q A 0.0000
324 G A 0.0000
325 A A 0.0000
326 G A 0.0000
327 Y A 0.0000
328 L A 0.0000
329 Q A -0.1740
330 F A 0.0000
331 A A -0.8244
332 G A 0.0000
333 D A -2.2490
334 Y A 0.0000
335 R A -2.7176
336 V A 0.0000
337 S A -0.6157
338 A A -0.0453
339 L A 0.4988
340 N A -0.9832
341 G A -0.9576
342 Q A -0.6226
343 T A -0.3969
344 W A 0.0000
345 M A -0.0400
346 G A 0.0000
347 G A 0.0000
348 G A 0.0000
349 I A 0.0000
350 I A 0.0000
351 T A 0.0000
352 D A -2.0852
353 K A -2.9045
354 G A -1.9639
355 T A 0.0000
356 H A -1.8333
357 V A 0.0000
358 L A -1.1322
359 W A 0.0000
360 Q A -0.8904
361 V A 0.0000
362 N A -0.2238
363 G A -0.1285
364 V A 0.1987
365 A A -0.1005
366 G A -0.5843
367 D A -0.6158
368 N A -0.9841
369 L A -0.3624
370 H A 0.0000
371 K A 0.0000
372 T A 0.0000
373 G A -1.7294
374 E A -2.9575
375 G A 0.0000
376 T A -1.0597
377 L A 0.0000
378 T A -0.3226
379 V A 0.0000
380 N A -1.0870
381 G A 0.0000
382 T A -1.1106
383 G A 0.0000
384 V A 0.1122
385 N A 0.0000
386 A A 0.1407
387 G A 0.0000
388 G A -0.6220
389 L A 0.0000
390 K A -0.6177
391 V A 0.0000
392 G A 0.0000
393 D A -1.2010
394 G A -1.6056
395 T A -0.5411
396 V A 0.0000
397 I A 0.3645
398 L A 0.0000
399 N A -1.2364
400 Q A 0.0000
401 Q A -1.9301
402 A A -1.9703
403 D A -2.2455
404 A A -1.7617
405 D A -2.7090
406 G A -2.4286
407 K A -2.6719
408 V A -1.4920
409 Q A -0.8927
410 A A 0.0000
411 F A 0.0000
412 S A -0.5123
413 S A -0.7637
414 V A 0.0000
415 G A -0.4170
416 I A 0.0000
417 A A 0.0000
418 S A -0.6723
419 G A -0.9940
420 R A -1.3789
421 P A 0.0000
422 T A -0.3032
423 V A 0.0000
424 V A 0.0443
425 L A 0.0000
426 S A -0.7545
427 D A -1.4424
428 S A -1.7139
429 Q A -2.1189
430 Q A 0.0000
431 V A 0.0000
432 N A -1.7467
433 P A -1.2495
434 D A -1.2223
435 N A -1.1454
436 I A 0.0000
437 S A -0.5292
438 W A 0.0000
439 G A -0.5180
440 Y A -0.2981
441 R A -0.7370
442 G A 0.0000
443 G A 0.0000
444 R A -0.5851
445 L A 0.0000
446 E A 0.0000
447 L A 0.0000
448 N A -2.0683
449 G A 0.0000
450 N A -1.8441
451 N A -1.8084
452 L A 0.0000
453 T A -0.9620
454 F A 0.0000
455 T A -1.1490
456 R A -1.5746
457 L A -0.7069
458 Q A -0.9145
459 A A -0.4407
460 A A -0.4380
461 D A -0.2030
462 Y A 0.2381
463 G A -0.3298
464 A A 0.0000
465 I A -0.0106
466 I A 0.0000
467 T A 0.0000
468 N A 0.0000
469 N A -2.4346
470 S A -2.6999
471 E A -3.5018
472 K A -3.6879
473 K A -3.6305
474 S A 0.0000
475 T A -1.2906
476 V A 0.0000
477 T A -0.7233
478 L A 0.0000
479 D A -1.4339
480 L A 0.0000
481 Q A -1.1927
482 T A -0.9141
483 L A -1.1809
484 K A -1.3077
485 A A -1.6849
486 S A -1.4768
487 D A -2.3519
488 I A 0.0000
489 N A -1.6533
490 V A -0.8601
491 P A -0.2351
492 V A 0.1321
493 N A -0.2091
494 T A 0.0758
495 V A 0.0000
496 S A 1.7571
497 I A 3.7539
498 F A 3.5223
499 G A 1.2355
500 G A -0.5381
501 R A -2.1005
502 G A -1.5346
503 A A -0.9902
504 P A -1.0594
505 G A -1.0559
506 D A -0.8154
507 L A 0.0000
508 Y A 0.0000
509 Y A -0.7063
510 D A 0.0000
511 S A -0.8686
512 S A -0.8402
513 T A -1.0172
514 K A -2.0166
515 Q A -2.3985
516 Y A 0.0000
517 F A -0.9929
518 I A 0.0000
519 L A 0.0000
520 K A -1.9001
521 A A -1.2483
522 S A -1.2066
523 S A -1.3186
524 Y A 0.0000
525 S A 0.8111
526 P A 2.4924
527 F A 3.5783
528 F A 2.2768
529 S A 0.8422
530 D A -0.4965
531 L A -0.5741
532 N A -1.7828
533 N A -1.5442
534 S A -1.4396
535 S A -1.0371
536 V A -1.0868
537 W A 0.0000
538 Q A -1.5562
539 N A -1.8450
540 V A -1.6955
541 G A -2.5998
542 K A -3.7802
543 D A -3.6872
544 R A -4.0187
545 N A -3.8791
546 K A -4.0633
547 A A 0.0000
548 I A -2.3580
549 D A -3.2566
550 T A -2.0495
551 V A 0.0000
552 K A -2.4106
553 Q A -2.6458
554 Q A -2.1894
555 K A -1.9858
556 I A 0.0000
557 E A -2.8676
558 A A -1.5805
559 S A -1.2064
560 S A -1.4852
561 Q A -1.2488
562 P A 0.0000
563 Y A -0.2728
564 M A 0.0000
565 Y A 0.0000
566 H A 0.0000
567 G A 0.0000
568 Q A -0.1728
569 L A 0.0000
570 N A -0.6446
571 G A -1.2596
572 N A -2.4807
573 M A 0.0000
574 D A -1.2330
575 V A 0.0000
576 N A -0.9162
577 I A 0.0000
578 P A -1.4243
579 Q A -1.9421
580 L A 0.0000
581 S A -1.5627
582 G A -2.1165
583 K A -2.0234
584 D A -1.3067
585 V A -0.5204
586 L A 0.0000
587 A A 0.0000
588 L A 0.0000
589 D A 0.0000
590 G A 0.0000
591 S A 0.0000
592 V A 0.0000
593 N A -1.1485
594 L A 0.0000
595 P A -1.9359
596 E A -2.8650
597 G A 0.0000
598 S A 0.0000
599 I A 0.0000
600 T A -0.9351
601 K A 0.0000
602 K A -1.6739
603 S A -1.1898
604 G A -0.8978
605 T A -0.4617
606 L A 0.0000
607 I A 0.0000
608 F A 0.0000
609 Q A 0.0000
610 G A 0.0000
611 H A 0.0000
612 P A 0.0000
613 V A -0.3554
614 I A -0.1867
615 H A -0.4754
616 A A 0.0000
617 G A -0.6370
618 T A -0.6043
619 T A -0.7459
620 T A 0.0000
621 S A -0.7280
622 S A -0.7081
623 S A -0.5631
624 Q A -0.6101
625 S A -0.7775
626 D A -1.0815
627 W A 0.0000
628 E A -0.9691
629 T A -1.0013
630 R A 0.0000
631 Q A -1.2755
632 F A 0.0000
633 T A -1.4310
634 L A 0.0000
635 E A -2.8808
636 K A -2.2901
637 L A 0.0000
638 K A -1.5270
639 L A 0.0000
640 D A -1.2979
641 A A -1.2439
642 A A 0.0000
643 T A -0.1854
644 F A 0.0000
645 H A 0.0000
646 L A 0.0000
647 S A 0.0000
648 R A 0.0000
649 N A 0.0000
650 G A 0.0000
651 K A -1.6216
652 M A 0.0000
653 Q A -1.5390
654 G A -1.4405
655 D A -1.5850
656 I A 0.0000
657 N A -1.2017
658 A A 0.0000
659 T A -2.0074
660 N A -2.3494
661 G A -2.1720
662 S A 0.0000
663 T A -0.4836
664 V A 0.0000
665 I A 0.0491
666 L A 0.0000
667 G A -0.3863
668 S A 0.0000
669 S A -0.5777
670 R A -1.3200
671 V A 0.0000
672 F A 0.0000
673 T A 0.0000
674 D A 0.0000
675 R A -1.9463
676 S A -1.2837
677 D A 0.0000
678 G A -0.6683
679 T A -1.0343
680 G A -1.0893
681 N A -1.7566
682 A A -0.7199
683 V A -0.3912
684 S A -0.6624
685 S A -0.6838
686 V A -0.9283
687 E A -1.9289
688 G A -1.2756
689 S A -1.0400
690 A A 0.0000
691 T A -0.4891
692 A A 0.0000
693 T A 0.0425
694 T A 0.4569
695 V A 1.0637
696 G A -0.1923
697 D A -0.6390
698 Q A -0.5487
699 S A 0.0000
700 D A -1.2245
701 Y A 0.0000
702 S A -0.8673
703 G A -1.1597
704 N A 0.0000
705 V A 0.0000
706 T A -0.7950
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579 Q B -1.9431
580 L B 0.0000
581 S B -1.8396
582 G B -2.6317
583 K B -2.6287
584 D B 0.0000
585 V B -0.7696
586 L B 0.0000
587 A B 0.0000
588 L B 0.0000
589 D B 0.0000
590 G B 0.0000
591 S B 0.0000
592 V B 0.0000
593 N B -1.2342
594 L B 0.0000
595 P B -2.0741
596 E B -2.9983
597 G B 0.0000
598 S B -1.7990
599 I B 0.0000
600 T B -0.9236
601 K B 0.0000
602 K B -1.5405
603 S B -1.1025
604 G B -0.9504
605 T B -0.5190
606 L B 0.0000
607 I B 0.0000
608 F B 0.0000
609 Q B 0.0000
610 G B 0.0000
611 H B -0.5856
612 P B 0.0000
613 V B -0.8117
614 I B -0.3961
615 H B -0.5653
616 A B 0.0000
617 G B -0.6301
618 T B -0.6297
619 T B -0.7627
620 T B 0.0000
621 S B -0.7331
622 S B -0.9067
623 S B -0.7009
624 Q B -0.9647
625 S B -1.2752
626 D B -2.2109
627 W B 0.0000
628 E B -1.6701
629 T B -1.3208
630 R B 0.0000
631 Q B -1.3191
632 F B 0.0000
633 T B -1.5164
634 L B 0.0000
635 E B -3.2599
636 K B -2.8150
637 L B 0.0000
638 K B -1.3381
639 L B 0.0000
640 D B -1.1555
641 A B -1.1862
642 A B 0.0000
643 T B -0.1842
644 F B 0.0000
645 H B 0.0000
646 L B 0.0000
647 S B 0.0000
648 R B 0.0000
649 N B 0.0000
650 G B 0.0000
651 K B -1.4629
652 M B 0.0000
653 Q B -1.5784
654 G B -1.6884
655 D B -1.9740
656 I B 0.0000
657 N B -1.2934
658 A B 0.0000
659 T B -1.9910
660 N B -2.3622
661 G B -2.2424
662 S B 0.0000
663 T B -0.4648
664 V B 0.0000
665 I B 0.0482
666 L B 0.0000
667 G B -0.3728
668 S B 0.0000
669 S B -0.5935
670 R B -1.3473
671 V B 0.0000
672 F B 0.0000
673 T B 0.0000
674 D B 0.0000
675 R B -1.8783
676 S B -1.2056
677 D B 0.0000
678 G B -0.6726
679 T B -1.0017
680 G B -1.1202
681 N B -1.7031
682 A B -0.5976
683 V B -0.2210
684 S B -0.6499
685 S B -0.7337
686 V B -0.9198
687 E B -1.8572
688 G B -1.2624
689 S B -1.0467
690 A B 0.0000
691 T B -0.4592
692 A B 0.0000
693 T B 0.0587
694 T B 0.4502
695 V B 1.1253
696 G B 0.0535
697 D B -0.7817
698 Q B -0.4447
699 S B 0.0000
700 D B -1.1213
701 Y B 0.0000
702 S B -0.9294
703 G B -1.4179
704 N B -1.1764
705 V B 0.0000
706 T B -0.8736
707 L B 0.0000
708 E B -3.1207
709 N B -3.1329
710 K B -3.2730
711 S B 0.0000
712 S B -1.0484
713 L B 0.0000
714 Q B -0.1465
715 I B 0.0000
716 M B -0.2611
717 E B -0.6044
718 R B -1.0205
719 F B 0.0000
720 T B -0.9600
721 G B 0.0000
722 G B 0.0000
723 I B 0.0000
724 E B -0.5243
725 A B 0.0000
726 Y B -1.5576
727 D B -2.9983
728 S B 0.0000
729 T B -1.2112
730 V B 0.0000
731 S B -0.2230
732 V B 0.0000
733 T B -1.0478
734 S B 0.0000
735 Q B -2.0404
736 N B -1.4236
737 A B 0.0000
738 V B -0.9167
739 F B 0.0000
740 D B -1.7576
741 R B -1.8906
742 V B 0.0400
743 G B 0.0000
744 S B 0.3421
745 F B 0.0000
746 V B -0.3142
747 N B -1.5080
748 S B 0.0000
749 S B -0.7320
750 L B 0.0000
751 T B -0.7333
752 L B 0.0000
753 G B -1.8352
754 K B -2.9729
755 G B -2.3891
756 A B 0.0000
757 K B -2.2140
758 L B 0.0000
759 T B -0.6238
760 A B 0.0000
761 Q B -0.4504
762 S B 0.0403
763 G B 0.0000
764 I B 0.0000
765 F B 1.2472
766 S B 0.0000
767 T B -0.5517
768 G B -0.9683
769 A B -1.1768
770 V B 0.0000
771 D B -1.2313
772 V B 0.0000
773 K B -2.7492
774 E B -3.4849
775 N B -3.1390
776 A B 0.0000
777 S B -1.5539
778 L B 0.0000
779 T B -0.4191
780 L B 0.0000
781 T B 0.0000
782 G B 0.0000
783 M B 0.1795
784 P B -0.5424
785 S B -1.2019
786 A B -1.0027
787 Q B -2.0042
788 K B -2.5969
789 Q B -2.2428
790 G B -1.8009
791 Y B -1.6159
792 Y B -0.6930
793 S B -0.1382
794 P B 0.7010
795 V B 1.5634
796 I B 2.2233
797 S B 0.0000
798 T B 0.1342
799 T B 0.0000
800 E B -2.0047
801 G B 0.0000
802 I B 0.0000
803 N B -1.3357
804 L B 0.0000
805 E B -2.8289
806 D B -3.1171
807 N B -2.8269
808 A B 0.0000
809 S B -1.2332
810 F B 0.0000
811 S B -0.4003
812 V B 0.0000
813 K B -0.8215
814 N B 0.0000
815 M B 0.0000
816 G B 0.0000
817 Y B 0.0000
818 L B 0.0000
819 S B -0.5765
820 S B 0.0000
821 D B -2.0568
822 I B 0.0000
823 H B -1.1846
824 A B 0.0000
825 G B -1.2542
826 T B -0.9596
827 T B -1.6035
828 A B -1.4856
829 A B 0.0000
830 T B -0.8188
831 I B 0.0000
832 N B -0.6905
833 L B 0.0000
834 G B -0.9657
835 D B -1.4065
836 S B -1.6810
837 D B -2.3516
838 A B -1.7828
839 D B -2.5671
840 A B -1.9687
841 G B -1.7337
842 K B -2.4037
843 T B 0.0000
844 D B -2.0300
845 S B -0.8479
846 P B -0.2803
847 L B 0.2777
848 F B 0.0843
849 S B -0.0928
850 S B -0.0766
851 L B 0.4323
852 M B 0.0000
853 K B -0.4894
854 G B -0.3796
855 Y B -0.4775
856 N B 0.0000
857 A B 0.0000
858 V B 0.0000
859 L B 0.0000
860 R B -1.4078
861 G B 0.0000
862 S B -1.5785
863 I B 0.0000
864 T B -1.3566
865 G B 0.0000
866 A B -1.1958
867 Q B -1.6473
868 S B 0.0000
869 T B -0.8099
870 V B 0.0000
871 N B -1.0900
872 M B 0.0000
873 I B -1.4538
874 N B -1.1762
875 A B 0.0000
876 L B 0.0000
877 W B 0.0000
878 Y B 0.0000
879 S B 0.0000
880 D B -2.7402
881 G B -2.3806
882 K B -2.5262
883 S B 0.0000
884 E B -1.8331
885 A B 0.0000
886 G B -1.4733
887 A B -1.7620
888 L B 0.0000
889 K B -2.0823
890 A B 0.0000
891 K B -2.7365
892 G B -1.9717
893 S B 0.0000
894 R B -0.8251
895 I B 0.0000
896 E B -0.9163
897 L B 0.0000
898 G B -2.2556
899 D B -3.2180
900 G B -2.2995
901 K B -2.8457
902 H B -2.5859
903 F B -1.9732
904 A B 0.0000
905 T B -1.3079
906 L B 0.0000
907 Q B -1.8763
908 V B 0.0000
909 K B -2.7391
910 E B -2.8555
911 L B 0.0000
912 S B -1.7450
913 A B 0.0000
914 D B -3.3739
915 N B -3.0482
916 T B 0.0000
917 T B -1.0127
918 F B 0.0000
919 L B 0.0000
920 M B 0.0000
921 H B -1.2879
922 T B 0.0000
923 N B -1.8028
924 N B -1.6441
925 S B -1.3697
926 R B -2.4589
927 A B -1.5185
928 D B 0.0000
929 Q B -0.9545
930 L B 0.0000
931 N B -1.2231
932 V B 0.0000
933 T B -2.2600
934 D B -3.4209
935 K B -3.3830
936 L B 0.0000
937 S B -1.3854
938 G B -2.0367
939 S B -2.3918
940 N B -2.5837
941 N B 0.0000
942 S B -1.0087
943 V B 0.0000
944 L B -0.0131
945 V B 0.0000
946 D B -0.5919
947 F B -0.6220
948 L B -0.7051
949 N B -1.6924
950 K B -2.1586
951 P B -1.4287
952 A B -1.2430
953 S B -1.3104
954 E B -1.8726
955 M B -1.1773
956 S B -0.8408
957 V B 0.0000
958 T B -0.6503
959 L B 0.0000
960 I B 0.0000
961 T B -0.9528
962 A B 0.0000
963 P B -3.0797
964 K B -3.8286
965 G B -2.5793
966 S B 0.0000
967 D B -2.9813
968 E B -3.3232
969 K B -3.0387
970 T B 0.0000
971 F B 0.0000
972 T B -0.8348
973 A B 0.2102
974 G B -0.0012
975 T B -0.5053
976 Q B -0.8619
977 Q B -0.8155
978 I B 0.2413
979 G B 0.4743
980 F B 1.5693
981 S B 0.4002
982 N B -0.6500
983 V B 0.0000
984 T B -0.4466
985 P B 0.0000
986 V B 0.5651
987 I B 0.3570
988 S B -0.4051
989 T B -1.7639
990 E B -2.4351
991 K B -3.7948
992 T B -3.1125
993 D B -3.4680
994 D B -3.5363
995 A B -2.8190
996 T B 0.0000
997 K B -1.8239
998 W B 0.0000
999 V B 0.0000
1000 L B 0.0000
1001 T B -0.4083
1002 G B 0.0000
1003 Y B -0.1523
1004 Q B -0.9827
1005 T B -0.7655
1006 T B -0.3760
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5764 7.3553 View CSV PDB
4.5 -0.6187 7.3436 View CSV PDB
5.0 -0.6688 7.3306 View CSV PDB
5.5 -0.7178 7.3171 View CSV PDB
6.0 -0.7555 7.3035 View CSV PDB
6.5 -0.7739 7.2898 View CSV PDB
7.0 -0.7734 7.2762 View CSV PDB
7.5 -0.7606 7.2628 View CSV PDB
8.0 -0.7407 7.2501 View CSV PDB
8.5 -0.7144 7.2393 View CSV PDB
9.0 -0.6803 7.2317 View CSV PDB