Chain sequence(s) |
A: MGEMFKFIYTFILFVHLFLVVIFEDIGHIKYCGIVDDCYKSKKPLFKIWKCVENVCVLWYK
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.8050 | |
2 | G | A | -0.0410 | |
3 | E | A | -0.4554 | |
4 | M | A | 2.0585 | |
5 | F | A | 2.8659 | |
6 | K | A | 1.1306 | |
7 | F | A | 3.5015 | |
8 | I | A | 4.8493 | |
9 | Y | A | 4.5158 | |
10 | T | A | 4.0299 | |
11 | F | A | 5.3802 | |
12 | I | A | 5.0988 | |
13 | L | A | 4.8136 | |
14 | F | A | 5.2683 | |
15 | V | A | 4.1978 | |
16 | H | A | 3.5225 | |
17 | L | A | 5.0392 | |
18 | F | A | 5.5147 | |
19 | L | A | 4.3408 | |
20 | V | A | 4.4099 | |
21 | V | A | 3.8973 | |
22 | I | A | 3.2113 | |
23 | F | A | 2.9076 | |
24 | E | A | -0.0501 | |
25 | D | A | -0.4303 | |
26 | I | A | 1.3006 | |
27 | G | A | -0.3081 | |
28 | H | A | -0.7951 | |
29 | I | A | 0.4570 | |
30 | K | A | -0.0456 | |
31 | Y | A | 0.8364 | |
32 | C | A | 0.0000 | |
33 | G | A | 0.2470 | |
34 | I | A | 1.8240 | |
35 | V | A | 1.0675 | |
36 | D | A | -1.0435 | |
37 | D | A | -0.7335 | |
38 | C | A | 0.0000 | |
39 | Y | A | -1.0913 | |
40 | K | A | -2.5534 | |
41 | S | A | -2.3247 | |
42 | K | A | -2.9094 | |
43 | K | A | -2.3813 | |
44 | P | A | -0.1410 | |
45 | L | A | 1.5951 | |
46 | F | A | 2.1569 | |
47 | K | A | 0.6651 | |
48 | I | A | 1.9170 | |
49 | W | A | 1.5073 | |
50 | K | A | 0.4787 | |
51 | C | A | 0.5825 | |
52 | V | A | 0.5076 | |
53 | E | A | -1.6588 | |
54 | N | A | -0.8072 | |
55 | V | A | 0.4553 | |
56 | C | A | 0.0000 | |
57 | V | A | 1.4148 | |
58 | L | A | 1.6833 | |
59 | W | A | 1.5338 | |
60 | Y | A | 1.3446 | |
61 | K | A | -0.6174 |