Chain sequence(s) |
A: MEEEKHHHHHLFHHKDKAEEGPVDYEKEIKHHKHLEQIGKLGTVAAGAYALHEKHEAKKDPEHAHKHKIEEEIAAAAAVGAGGFAFHEHHEKKDAKKEEKKKLRGDTTISSKLLF
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | -0.5285 | |
2 | E | A | -2.8798 | |
3 | E | A | -3.8700 | |
4 | E | A | -4.2614 | |
5 | K | A | -4.1470 | |
6 | H | A | -3.3152 | |
7 | H | A | -3.0283 | |
8 | H | A | -2.4839 | |
9 | H | A | -1.5644 | |
10 | H | A | -0.7840 | |
11 | L | A | 1.2128 | |
12 | F | A | 1.2335 | |
13 | H | A | -1.1073 | |
14 | H | A | -2.2729 | |
15 | K | A | -3.5338 | |
16 | D | A | -4.1107 | |
17 | K | A | -3.8583 | |
18 | A | A | -3.0220 | |
19 | E | A | -3.6270 | |
20 | E | A | -2.8202 | |
21 | G | A | -1.8170 | |
22 | P | A | -0.6824 | |
23 | V | A | -0.2525 | |
24 | D | A | -1.7799 | |
25 | Y | A | -0.8108 | |
26 | E | A | -2.7893 | |
27 | K | A | -3.6616 | |
28 | E | A | -3.2396 | |
29 | I | A | -1.7717 | |
30 | K | A | -3.3879 | |
31 | H | A | -3.4923 | |
32 | H | A | -3.0766 | |
33 | K | A | -3.2632 | |
34 | H | A | -2.3430 | |
35 | L | A | -0.7126 | |
36 | E | A | -2.1586 | |
37 | Q | A | -1.6725 | |
38 | I | A | 0.8260 | |
39 | G | A | -0.4134 | |
40 | K | A | -0.8289 | |
41 | L | A | 1.3277 | |
42 | G | A | 0.4629 | |
43 | T | A | 0.6661 | |
44 | V | A | 2.0081 | |
45 | A | A | 1.3929 | |
46 | A | A | 1.0481 | |
47 | G | A | 1.2295 | |
48 | A | A | 1.1104 | |
49 | Y | A | 0.9985 | |
50 | A | A | 0.2306 | |
51 | L | A | 0.1541 | |
52 | H | A | -1.5376 | |
53 | E | A | -2.8294 | |
54 | K | A | -3.1098 | |
55 | H | A | -3.3424 | |
56 | E | A | -4.1145 | |
57 | A | A | -3.9942 | |
58 | K | A | -4.3919 | |
59 | K | A | -4.4310 | |
60 | D | A | -4.2616 | |
61 | P | A | -3.2430 | |
62 | E | A | -3.5737 | |
63 | H | A | -3.8790 | |
64 | A | A | -2.9745 | |
65 | H | A | -2.9616 | |
66 | K | A | -3.4172 | |
67 | H | A | -3.0694 | |
68 | K | A | -3.0370 | |
69 | I | A | -0.9833 | |
70 | E | A | -2.4300 | |
71 | E | A | -2.4404 | |
72 | E | A | -1.6958 | |
73 | I | A | 0.6773 | |
74 | A | A | -0.0264 | |
75 | A | A | 0.1938 | |
76 | A | A | 0.4772 | |
77 | A | A | 0.6495 | |
78 | A | A | 1.0370 | |
79 | V | A | 1.9808 | |
80 | G | A | 1.0757 | |
81 | A | A | 1.0724 | |
82 | G | A | 1.1282 | |
83 | G | A | 0.9702 | |
84 | F | A | 1.5768 | |
85 | A | A | 0.5736 | |
86 | F | A | 0.5276 | |
87 | H | A | -1.2973 | |
88 | E | A | -2.7789 | |
89 | H | A | -2.9082 | |
90 | H | A | -3.8626 | |
91 | E | A | -4.7399 | |
92 | K | A | -5.3100 | |
93 | K | A | -5.4740 | |
94 | D | A | -5.3714 | |
95 | A | A | -4.6594 | |
96 | K | A | -5.7944 | |
97 | K | A | -6.3595 | |
98 | E | A | -6.2253 | |
99 | E | A | -5.8342 | |
100 | K | A | -5.6884 | |
101 | K | A | -5.7299 | |
102 | K | A | -4.7654 | |
103 | L | A | -2.4498 | |
104 | R | A | -3.5423 | |
105 | G | A | -2.5605 | |
106 | D | A | -2.4055 | |
107 | T | A | -1.4149 | |
108 | T | A | -0.5888 | |
109 | I | A | 0.9889 | |
110 | S | A | 0.2167 | |
111 | S | A | 0.4948 | |
112 | K | A | 0.3338 | |
113 | L | A | 2.3911 | |
114 | L | A | 2.8186 | |
115 | F | A | 2.6688 |