Chain sequence(s) |
H: QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLSPGK
K: QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSCDKCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLTVDKSRWQQGNVFSCSVMHEALHNHYTQKSLSLS input PDB |
Selected Chain(s) | H,K |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | Yes |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | VA5H |
Energy difference between WT (input) and mutated protein (by FoldX) | 0.170505 kcal/mol |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:01) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with all chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] PDB-Info: The input structure is globular. Max score is recommended for pH analysis. (00:00:03) [INFO] FoldX: Starting FoldX energy minimization (00:00:03) [INFO] FoldX: Building mutant model (00:04:33) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:04:41) [INFO] agg3D: Running pKa-ANI on /STORAGE/DATA/lcbio/aggreskan/ccdc4db303645de/tmp/folded.pdb (00:04:41) [INFO] Main: Simulation completed successfully. (00:08:40) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | Q | H | -1.4961 | |
2 | V | H | -1.0569 | |
3 | Q | H | -1.4628 | |
4 | L | H | 0.0000 | |
5 | A | H | -1.0210 | mutated: VA5H |
6 | Q | H | -0.8011 | |
7 | S | H | -1.0832 | |
8 | G | H | -0.8316 | |
9 | A | H | -0.4712 | |
10 | E | H | -0.9162 | |
11 | V | H | 0.1558 | |
12 | K | H | -1.2890 | |
13 | K | H | -2.3022 | |
14 | P | H | -2.2431 | |
15 | G | H | -1.9437 | |
16 | A | H | -1.4847 | |
17 | S | H | -1.8003 | |
18 | V | H | 0.0000 | |
19 | K | H | -2.1992 | |
20 | V | H | 0.0000 | |
21 | S | H | -0.7204 | |
22 | C | H | 0.0000 | |
23 | Q | H | -1.4536 | |
24 | A | H | 0.0000 | |
25 | S | H | -1.5102 | |
26 | G | H | -1.4457 | |
27 | Y | H | -1.5695 | |
28 | R | H | -2.3441 | |
29 | F | H | 0.0000 | |
30 | S | H | -1.1227 | |
31 | N | H | -1.4479 | |
32 | F | H | -0.5093 | |
33 | V | H | 0.0000 | |
34 | I | H | 0.0000 | |
35 | H | H | 0.0000 | |
36 | W | H | 0.0000 | |
37 | V | H | 0.0000 | |
38 | R | H | 0.0000 | |
39 | Q | H | -0.9074 | |
40 | A | H | -0.9849 | |
41 | P | H | -1.0712 | |
42 | G | H | -1.5394 | |
43 | Q | H | -2.3362 | |
44 | R | H | -2.2577 | |
45 | F | H | -0.4834 | |
46 | E | H | -0.5982 | |
47 | W | H | 0.0578 | |
48 | M | H | 0.0000 | |
49 | G | H | 0.0000 | |
50 | W | H | -0.7013 | |
51 | I | H | 0.0000 | |
52 | N | H | -1.2030 | |
52A | P | H | -0.9332 | |
53 | Y | H | -0.0284 | |
54 | N | H | -1.3176 | |
55 | G | H | -1.4901 | |
56 | N | H | -2.3098 | |
57 | K | H | -2.2559 | |
58 | E | H | -1.9438 | |
59 | F | H | -1.3488 | |
60 | S | H | -1.1720 | |
61 | A | H | -1.5286 | |
62 | K | H | -2.2966 | |
63 | F | H | 0.0000 | |
64 | Q | H | -2.6575 | |
65 | D | H | -2.9332 | |
66 | R | H | -2.2980 | |
67 | V | H | 0.0000 | |
68 | T | H | -1.1782 | |
69 | F | H | 0.0000 | |
70 | T | H | -0.5774 | |
71 | A | H | -0.7953 | |
72 | D | H | -1.0915 | |
73 | T | H | -0.9067 | |
74 | S | H | -0.6706 | |
75 | A | H | -0.7815 | |
76 | N | H | -1.4026 | |
77 | T | H | 0.0000 | |
78 | A | H | 0.0000 | |
79 | Y | H | -0.5534 | |
80 | M | H | 0.0000 | |
81 | E | H | -1.7115 | |
82 | L | H | 0.0000 | |
82A | R | H | -2.5052 | |
82B | S | H | -1.7463 | |
82C | L | H | 0.0000 | |
83 | R | H | -2.6930 | |
84 | S | H | -1.5166 | |
85 | A | H | -0.6392 | |
86 | D | H | 0.0000 | |
87 | T | H | -0.2359 | |
88 | A | H | 0.0000 | |
89 | V | H | 0.1317 | |
90 | Y | H | 0.0000 | |
91 | Y | H | -0.0003 | |
92 | C | H | 0.0000 | |
93 | A | H | 0.0000 | |
94 | R | H | 0.0000 | |
95 | V | H | 0.0000 | |
96 | G | H | 0.0000 | |
97 | P | H | -0.1006 | |
98 | Y | H | -0.1914 | |
99 | S | H | -0.5127 | |
100 | W | H | -0.0927 | |
100A | D | H | -2.1565 | |
100B | D | H | -2.8153 | |
100C | S | H | -2.0554 | |
100D | P | H | -1.8520 | |
100E | Q | H | -2.0716 | |
100F | D | H | -2.7676 | |
100G | N | H | 0.0000 | |
100H | Y | H | -0.0334 | |
100I | Y | H | 0.8840 | |
100J | M | H | 0.8812 | |
101 | D | H | 0.2511 | |
102 | V | H | 0.4385 | |
103 | W | H | 0.1307 | |
104 | G | H | -0.8599 | |
105 | K | H | -1.5671 | |
106 | G | H | -0.7709 | |
107 | T | H | 0.0000 | |
108 | T | H | -0.2373 | |
109 | V | H | 0.0000 | |
110 | I | H | -0.2822 | |
111 | V | H | 0.0000 | |
112 | S | H | -1.1245 | |
113 | S | H | -1.1177 | |
114 | A | H | -0.7526 | |
115 | S | H | -0.6867 | |
116 | T | H | -0.8237 | |
117 | K | H | -1.4811 | |
118 | G | H | -1.5006 | |
119 | P | H | -0.6123 | |
120 | S | H | 0.0917 | |
121 | V | H | 0.0000 | |
122 | F | H | 1.7206 | |
123 | P | H | 0.2756 | |
124 | L | H | 0.5489 | |
125 | A | H | -0.7118 | |
126 | P | H | -1.0183 | |
127 | S | H | -1.3617 | |
128 | S | H | -1.3788 | |
129 | K | H | -2.0265 | |
130 | S | H | -1.3713 | |
133 | T | H | -1.0850 | |
134 | S | H | -0.8885 | |
135 | G | H | -0.8651 | |
136 | G | H | -0.8825 | |
137 | T | H | -0.5732 | |
138 | A | H | -0.5374 | |
139 | A | H | 0.1278 | |
140 | L | H | 0.0000 | |
141 | G | H | 0.0000 | |
142 | C | H | 0.0000 | |
143 | L | H | 0.9253 | |
144 | V | H | 0.0000 | |
145 | K | H | 0.0200 | |
146 | D | H | -0.5364 | |
147 | Y | H | 0.0000 | |
148 | F | H | 0.0000 | |
149 | P | H | -0.5091 | |
150 | E | H | -0.8941 | |
151 | P | H | -0.8807 | |
152 | V | H | -0.6686 | |
153 | T | H | -0.5009 | |
154 | V | H | -0.0775 | |
156 | S | H | -0.2904 | |
157 | W | H | 0.0000 | |
162 | N | H | -0.6809 | |
163 | S | H | -0.5740 | |
164 | G | H | -0.5725 | |
165 | A | H | -0.2528 | |
166 | L | H | -0.0310 | |
167 | T | H | -0.3058 | |
168 | S | H | -0.3835 | |
169 | G | H | -0.4750 | |
171 | V | H | 0.0126 | |
172 | H | H | -0.4074 | |
173 | T | H | 0.2875 | |
174 | F | H | 1.0438 | |
175 | P | H | 0.7229 | |
176 | A | H | 1.2066 | |
177 | V | H | 2.4092 | |
178 | L | H | 1.9563 | |
179 | Q | H | 0.6471 | |
180 | S | H | 0.0921 | |
182 | S | H | -0.2043 | |
183 | G | H | 0.1933 | |
184 | L | H | 0.2207 | |
185 | Y | H | 0.8874 | |
186 | S | H | 0.7673 | |
187 | L | H | 0.0000 | |
188 | S | H | 0.7072 | |
189 | S | H | 0.0000 | |
190 | V | H | 0.4671 | |
191 | V | H | 0.0000 | |
192 | T | H | -0.2000 | |
193 | V | H | 0.0000 | |
194 | P | H | -0.4819 | |
195 | S | H | -0.6275 | |
196 | S | H | -0.5130 | |
197 | S | H | -0.6272 | |
198 | L | H | -0.7791 | |
199 | G | H | -1.0074 | |
200 | T | H | -0.7945 | |
203 | Q | H | -1.3929 | |
205 | T | H | -1.1938 | |
206 | Y | H | 0.0000 | |
207 | I | H | -1.1851 | |
208 | C | H | 0.0000 | |
209 | N | H | -1.1346 | |
210 | V | H | 0.0000 | |
211 | N | H | -1.5617 | |
212 | H | H | 0.0000 | |
213 | K | H | -2.7757 | |
214 | P | H | -1.7502 | |
215 | S | H | -1.9556 | |
216 | N | H | -2.6128 | |
217 | T | H | -2.0791 | |
218 | K | H | -2.3776 | |
219 | V | H | -1.0372 | |
220 | D | H | -1.6781 | |
221 | K | H | -1.5415 | |
222 | K | H | -2.3108 | |
225 | A | H | 0.0000 | |
226 | E | H | -2.9823 | |
227 | P | H | -2.0347 | |
228 | K | H | -2.4432 | |
229 | S | H | -1.9365 | |
230 | C | H | -1.3031 | |
232 | D | H | -2.9266 | |
235 | K | H | -3.1314 | |
236 | T | H | -2.2343 | |
237 | H | H | -2.3612 | |
238 | T | H | -1.3542 | |
239 | C | H | -0.2693 | |
240 | P | H | -0.3845 | |
241 | P | H | -0.0164 | |
242 | C | H | 0.4033 | |
243 | P | H | -0.1629 | |
244 | A | H | -0.9391 | |
245 | P | H | -1.0917 | |
246 | E | H | -1.3613 | |
247 | L | H | 1.3048 | |
248 | L | H | 1.5604 | |
249 | G | H | 0.2255 | |
250 | G | H | -0.2264 | |
251 | P | H | 0.0000 | |
252 | S | H | 0.1160 | |
253 | V | H | 0.0000 | |
254 | F | H | 1.3016 | |
255 | L | H | 1.0691 | |
256 | F | H | 1.2428 | |
257 | P | H | -0.0691 | |
258 | P | H | 0.0000 | |
259 | K | H | -2.1984 | |
260 | P | H | -1.2898 | |
261 | K | H | -0.9938 | |
262 | D | H | 0.0000 | |
263 | T | H | 0.0000 | |
264 | L | H | -0.2955 | |
265 | M | H | 0.3789 | |
266 | I | H | 1.3198 | |
267 | S | H | -0.0979 | |
268 | R | H | -1.5824 | |
269 | T | H | -0.7988 | |
270 | P | H | 0.0000 | |
271 | E | H | -1.2110 | |
272 | V | H | 0.0000 | |
273 | T | H | 0.5309 | |
274 | C | H | 0.0000 | |
275 | V | H | 0.0000 | |
276 | V | H | 0.0000 | |
277 | V | H | -0.7890 | |
278 | D | H | -1.2958 | |
279 | V | H | 0.0000 | |
280 | S | H | -1.7954 | |
281 | H | H | -2.0945 | |
282 | E | H | -2.8788 | |
283 | D | H | -2.4169 | |
284 | P | H | -2.3778 | |
285 | E | H | -2.9635 | |
286 | V | H | -1.8737 | |
287 | K | H | -2.1105 | |
288 | F | H | -1.1371 | |
289 | N | H | -1.2030 | |
290 | W | H | 0.0000 | |
291 | Y | H | -1.2977 | |
292 | V | H | 0.0000 | |
295 | D | H | -2.3781 | |
296 | G | H | -1.0927 | |
299 | V | H | 0.2233 | |
300 | E | H | -1.5066 | |
301 | V | H | -0.9334 | |
302 | H | H | -2.0380 | |
303 | N | H | -2.2034 | |
304 | A | H | -1.6658 | |
305 | K | H | -2.4950 | |
306 | T | H | -2.0797 | |
307 | K | H | -2.9021 | |
308 | P | H | -2.6652 | |
309 | R | H | -4.0779 | |
310 | E | H | -4.2847 | |
311 | E | H | -3.4255 | |
312 | Q | H | -1.8392 | |
313 | Y | H | 0.3347 | |
314 | N | H | -0.6912 | |
317 | S | H | -0.9140 | |
318 | T | H | 0.0000 | |
319 | Y | H | 0.0000 | |
320 | R | H | -3.1919 | |
321 | V | H | 0.0000 | |
322 | V | H | -1.3759 | |
323 | S | H | 0.0000 | |
324 | V | H | -0.8292 | |
325 | L | H | 0.0000 | |
326 | T | H | -0.6825 | |
327 | V | H | 0.0000 | |
328 | L | H | 0.2745 | |
329 | H | H | -0.4158 | |
330 | Q | H | -1.4503 | |
331 | D | H | -1.5180 | |
332 | W | H | 0.0000 | |
333 | L | H | -1.1183 | |
334 | N | H | -2.0708 | |
335 | G | H | -1.9890 | |
336 | K | H | -2.0940 | |
337 | E | H | -2.3720 | |
338 | Y | H | 0.0000 | |
339 | K | H | -1.6092 | |
340 | C | H | 0.0000 | |
341 | K | H | -1.3997 | |
342 | V | H | 0.0000 | |
343 | S | H | -1.2966 | |
344 | N | H | 0.0000 | |
345 | K | H | -2.4830 | |
346 | A | H | -1.5658 | |
347 | L | H | -0.5261 | |
348 | P | H | -0.6128 | |
349 | A | H | -0.4621 | |
350 | P | H | -0.6255 | |
351 | I | H | -0.3722 | |
352 | E | H | -1.3859 | |
353 | K | H | -0.9441 | |
354 | T | H | -0.9220 | |
355 | I | H | -0.2079 | |
357 | S | H | -1.1024 | |
358 | K | H | -1.2643 | |
359 | A | H | -1.0196 | |
360 | K | H | -2.2423 | |
361 | G | H | -1.8144 | |
363 | Q | H | -1.8399 | |
364 | P | H | -1.7545 | |
365 | R | H | -1.9233 | |
366 | E | H | -2.4626 | |
367 | P | H | 0.0000 | |
368 | Q | H | -1.2404 | |
369 | V | H | 0.0000 | |
370 | Y | H | 0.0000 | |
371 | T | H | 0.0000 | |
372 | L | H | 0.0000 | |
373 | P | H | -0.4271 | |
374 | P | H | -0.9525 | |
375 | S | H | -1.5299 | |
376 | R | H | -2.6795 | |
377 | D | H | -2.7709 | |
378 | E | H | 0.0000 | |
381 | L | H | -1.8023 | |
382 | T | H | -1.5701 | |
383 | K | H | -2.1767 | |
384 | N | H | -2.7362 | |
385 | Q | H | -2.9169 | |
386 | V | H | 0.0000 | |
387 | S | H | 0.0000 | |
388 | L | H | 0.0000 | |
389 | T | H | 0.0000 | |
390 | C | H | 0.0000 | |
391 | L | H | 0.0000 | |
392 | V | H | 0.0000 | |
393 | K | H | -0.5057 | |
394 | G | H | -0.9889 | |
395 | F | H | 0.0000 | |
396 | Y | H | -0.9085 | |
397 | P | H | -1.1626 | |
398 | S | H | -0.2908 | |
399 | D | H | -1.1131 | |
400 | I | H | -0.6016 | |
401 | A | H | -0.4158 | |
402 | V | H | -0.2071 | |
405 | E | H | -0.9163 | |
406 | W | H | 0.0000 | |
407 | E | H | -1.5040 | |
408 | S | H | 0.0000 | |
410 | N | H | -1.7901 | |
411 | G | H | -1.8533 | |
414 | Q | H | -2.2875 | |
415 | P | H | -1.9759 | |
416 | E | H | -1.9800 | |
417 | N | H | -2.3571 | |
418 | N | H | -2.1031 | |
419 | Y | H | -1.2989 | |
420 | K | H | -1.0885 | |
421 | T | H | -0.3375 | |
422 | T | H | 0.0000 | |
423 | P | H | -0.1557 | |
424 | P | H | 0.0473 | |
425 | V | H | 0.0000 | |
426 | L | H | 0.7100 | |
427 | D | H | -0.5754 | |
428 | S | H | -1.1592 | |
430 | D | H | -1.8313 | |
433 | G | H | -0.8119 | |
434 | S | H | 0.0000 | |
435 | F | H | 0.1495 | |
436 | F | H | 0.0000 | |
437 | L | H | 0.0000 | |
438 | Y | H | 0.0000 | |
439 | S | H | 0.0000 | |
440 | K | H | 0.0000 | |
441 | L | H | 0.0000 | |
442 | T | H | -1.3258 | |
443 | V | H | 0.0000 | |
444 | D | H | -3.0360 | |
445 | K | H | -2.7429 | |
446 | S | H | -2.2334 | |
447 | R | H | -2.0071 | |
448 | W | H | 0.0000 | |
449 | Q | H | -2.3887 | |
450 | Q | H | -2.2785 | |
451 | G | H | -1.4156 | |
452 | N | H | -0.6504 | |
453 | V | H | 0.7538 | |
454 | F | H | 0.0000 | |
455 | S | H | -0.6265 | |
456 | C | H | 0.0000 | |
457 | S | H | 0.0000 | |
458 | V | H | 0.0000 | |
459 | M | H | 0.0000 | |
460 | H | H | 0.0000 | |
461 | E | H | -1.3000 | |
462 | A | H | -1.6025 | |
463 | L | H | -1.6042 | |
464 | H | H | -1.9118 | |
465 | N | H | -1.8424 | |
466 | H | H | -1.4325 | |
467 | Y | H | -0.6369 | |
468 | T | H | -0.8292 | |
469 | Q | H | -1.1305 | |
470 | K | H | -1.0524 | |
471 | S | H | -0.3765 | |
472 | L | H | 0.0000 | |
473 | S | H | 0.0753 | |
474 | L | H | -0.5072 | |
475 | S | H | -0.7220 | |
476 | P | H | -0.9662 | |
477 | G | H | -1.6386 | |
478 | K | H | -2.4781 | |
1 | Q | K | -1.2638 | |
2 | V | K | -0.5902 | |
3 | Q | K | -0.8393 | |
4 | L | K | 0.0000 | |
5 | V | K | 0.0468 | |
6 | Q | K | -0.4226 | |
7 | S | K | -0.6702 | |
8 | G | K | -0.5043 | |
9 | A | K | -0.0746 | |
10 | E | K | -0.1734 | |
11 | V | K | 0.3295 | |
12 | K | K | -1.1892 | |
13 | K | K | -2.2692 | |
14 | P | K | -2.1345 | |
15 | G | K | -1.9343 | |
16 | A | K | -1.5830 | |
17 | S | K | -1.9240 | |
18 | V | K | 0.0000 | |
19 | K | K | -1.9454 | |
20 | V | K | 0.0000 | |
21 | S | K | -0.4880 | |
22 | C | K | 0.0000 | |
23 | Q | K | -0.9643 | |
24 | A | K | 0.0000 | |
25 | S | K | -1.0751 | |
26 | G | K | -1.1849 | |
27 | Y | K | -1.3837 | |
28 | R | K | -2.2409 | |
29 | F | K | 0.0000 | |
30 | S | K | -1.1114 | |
31 | N | K | -1.4213 | |
32 | F | K | -0.3573 | |
33 | V | K | 0.0000 | |
34 | I | K | 0.0000 | |
35 | H | K | 0.0000 | |
36 | W | K | 0.0000 | |
37 | V | K | 0.0000 | |
38 | R | K | 0.0000 | |
39 | Q | K | -0.5958 | |
40 | A | K | -0.7396 | |
41 | P | K | -0.8617 | |
42 | G | K | -1.2275 | |
43 | Q | K | -1.6946 | |
44 | R | K | -1.8762 | |
45 | F | K | -0.1554 | |
46 | E | K | -0.2933 | |
47 | W | K | 0.2709 | |
48 | M | K | 0.0000 | |
49 | G | K | 0.0000 | |
50 | W | K | 0.0000 | |
51 | I | K | 0.0000 | |
52 | N | K | -1.2343 | |
52A | P | K | 0.0000 | |
53 | Y | K | 0.0141 | |
54 | N | K | -1.4991 | |
55 | G | K | -1.5851 | |
56 | N | K | -2.3392 | |
57 | K | K | -2.3264 | |
58 | E | K | -1.8090 | |
59 | F | K | -1.1638 | |
60 | S | K | 0.0000 | |
61 | A | K | -1.4958 | |
62 | K | K | -2.2734 | |
63 | F | K | 0.0000 | |
64 | Q | K | -2.6495 | |
65 | D | K | -3.0526 | |
66 | R | K | -2.5076 | |
67 | V | K | 0.0000 | |
68 | T | K | -1.1813 | |
69 | F | K | 0.0000 | |
70 | T | K | -0.5092 | |
71 | A | K | -0.4680 | |
72 | D | K | -1.1165 | |
73 | T | K | -0.7493 | |
74 | S | K | -0.6334 | |
75 | A | K | -0.7693 | |
76 | N | K | -1.2910 | |
77 | T | K | 0.0000 | |
78 | A | K | 0.0000 | |
79 | Y | K | -0.4063 | |
80 | M | K | 0.0000 | |
81 | E | K | -1.5145 | |
82 | L | K | 0.0000 | |
82A | R | K | -2.9239 | |
82B | S | K | -2.1403 | |
82C | L | K | 0.0000 | |
83 | R | K | -2.4465 | |
84 | S | K | -1.3687 | |
85 | A | K | -0.6031 | |
86 | D | K | 0.0000 | |
87 | T | K | -0.3057 | |
88 | A | K | 0.0000 | |
89 | V | K | 0.1497 | |
90 | Y | K | 0.0000 | |
91 | Y | K | 0.1844 | |
92 | C | K | 0.0000 | |
93 | A | K | 0.0000 | |
94 | R | K | 0.0000 | |
95 | V | K | 0.0000 | |
96 | G | K | 0.0000 | |
97 | P | K | -0.1167 | |
98 | Y | K | 0.3178 | |
99 | S | K | 0.0094 | |
100 | W | K | 0.2881 | |
100A | D | K | -1.5941 | |
100B | D | K | -1.6836 | |
100C | S | K | -1.5563 | |
100D | P | K | -1.4387 | |
100E | Q | K | -1.8395 | |
100F | D | K | -2.3594 | |
100G | N | K | 0.0000 | |
100H | Y | K | 0.0258 | |
100I | Y | K | 0.8467 | |
100J | M | K | 0.7992 | |
101 | D | K | 0.1143 | |
102 | V | K | 0.4310 | |
103 | W | K | 0.2633 | |
104 | G | K | -0.5245 | |
105 | K | K | -1.3600 | |
106 | G | K | 0.0000 | |
107 | T | K | 0.0000 | |
108 | T | K | -0.0537 | |
109 | V | K | 0.0000 | |
110 | I | K | 0.0000 | |
111 | V | K | 0.0000 | |
112 | S | K | -1.0858 | |
113 | S | K | -1.0866 | |
114 | A | K | -0.8332 | |
115 | S | K | -0.8538 | |
116 | T | K | -1.0929 | |
117 | K | K | -2.0977 | |
118 | G | K | -1.9446 | |
119 | P | K | 0.0000 | |
120 | S | K | -0.2098 | |
121 | V | K | 0.1876 | |
122 | F | K | 1.5942 | |
123 | P | K | 0.4386 | |
124 | L | K | 0.5710 | |
125 | A | K | -0.7161 | |
126 | P | K | 0.0000 | |
127 | S | K | -0.6173 | |
137 | T | K | -0.2043 | |
138 | A | K | -0.1355 | |
139 | A | K | 0.1056 | |
140 | L | K | 0.0000 | |
141 | G | K | 0.0000 | |
142 | C | K | 0.0000 | |
143 | L | K | 0.5928 | |
144 | V | K | 0.0000 | |
145 | K | K | -0.8280 | |
146 | D | K | -1.1263 | |
147 | Y | K | 0.0000 | |
148 | F | K | 0.0000 | |
149 | P | K | 0.0000 | |
150 | E | K | -0.7943 | |
151 | P | K | -0.9196 | |
152 | V | K | -0.7833 | |
153 | T | K | -0.7248 | |
154 | V | K | -0.3870 | |
156 | S | K | -0.3975 | |
157 | W | K | 0.0000 | |
162 | N | K | -0.8042 | |
163 | S | K | -0.6861 | |
164 | G | K | -0.6235 | |
165 | A | K | -0.3000 | |
166 | L | K | -0.0383 | |
167 | T | K | -0.3230 | |
168 | S | K | -0.3914 | |
169 | G | K | -0.5167 | |
171 | V | K | -0.0127 | |
172 | H | K | -0.4336 | |
173 | T | K | 0.1326 | |
174 | F | K | 0.8684 | |
175 | P | K | 0.4576 | |
176 | A | K | 1.1041 | |
177 | V | K | 2.3395 | |
178 | L | K | 2.1126 | |
179 | Q | K | 0.5119 | |
180 | S | K | 0.0986 | |
182 | S | K | -0.2501 | |
183 | G | K | -0.0699 | |
184 | L | K | -0.1526 | |
185 | Y | K | 0.0000 | |
186 | S | K | 0.2648 | |
187 | L | K | 0.0000 | |
188 | S | K | 0.5428 | |
189 | S | K | 0.0000 | |
190 | V | K | 0.4520 | |
191 | V | K | 0.0000 | |
192 | T | K | -0.2245 | |
193 | V | K | 0.0000 | |
194 | P | K | -0.3996 | |
195 | S | K | -0.3260 | |
196 | S | K | -0.4742 | |
197 | S | K | -0.5351 | |
198 | L | K | -0.8707 | |
199 | G | K | -1.3165 | |
200 | T | K | -0.6812 | |
203 | Q | K | -1.2208 | |
205 | T | K | -1.1203 | |
206 | Y | K | 0.0000 | |
207 | I | K | -1.1831 | |
208 | C | K | 0.0000 | |
209 | N | K | -1.2991 | |
210 | V | K | 0.0000 | |
211 | N | K | -2.0028 | |
212 | H | K | 0.0000 | |
213 | K | K | -2.8069 | |
214 | P | K | -1.7984 | |
215 | S | K | -2.1748 | |
216 | N | K | -2.7509 | |
217 | T | K | -2.1585 | |
218 | K | K | -2.4001 | |
219 | V | K | -0.9029 | |
220 | D | K | -1.9467 | |
221 | K | K | -1.6167 | |
222 | K | K | -2.2196 | |
225 | A | K | 0.0000 | |
226 | E | K | -2.6868 | |
227 | P | K | -2.1661 | |
228 | K | K | -2.4316 | |
229 | S | K | -1.5219 | |
230 | C | K | -0.7045 | |
232 | D | K | -2.0936 | |
235 | K | K | -2.6393 | |
239 | C | K | 0.5582 | |
240 | P | K | 0.1889 | |
241 | P | K | 0.1394 | |
242 | C | K | 0.3833 | |
243 | P | K | -0.4220 | |
244 | A | K | -0.4665 | |
245 | P | K | -0.7768 | |
246 | E | K | -0.6690 | |
247 | L | K | 1.6904 | |
248 | L | K | 2.0472 | |
249 | G | K | 0.6364 | |
250 | G | K | -0.0737 | |
251 | P | K | 0.0000 | |
252 | S | K | -0.0114 | |
253 | V | K | 0.0000 | |
254 | F | K | 1.3856 | |
255 | L | K | 0.9731 | |
256 | F | K | 1.3055 | |
257 | P | K | -0.1267 | |
258 | P | K | 0.0000 | |
259 | K | K | -2.0108 | |
260 | P | K | -1.2405 | |
261 | K | K | -0.8451 | |
262 | D | K | 0.0000 | |
263 | T | K | 0.0000 | |
264 | L | K | -0.0316 | |
265 | M | K | 0.8376 | |
266 | I | K | 1.7543 | |
267 | S | K | 0.4542 | |
268 | R | K | -0.5997 | |
269 | T | K | -0.3291 | |
270 | P | K | 0.0000 | |
271 | E | K | -0.8059 | |
272 | V | K | 0.0000 | |
273 | T | K | 0.3274 | |
274 | C | K | 0.0000 | |
275 | V | K | 0.0000 | |
276 | V | K | 0.0000 | |
277 | V | K | -0.9075 | |
278 | D | K | -2.0392 | |
279 | V | K | 0.0000 | |
280 | S | K | -2.1249 | |
281 | H | K | -2.3444 | |
282 | E | K | -2.8317 | |
283 | D | K | -2.6184 | |
284 | P | K | -2.7392 | |
285 | E | K | -3.0557 | |
286 | V | K | -1.9330 | |
287 | K | K | -2.1553 | |
288 | F | K | -1.1719 | |
289 | N | K | -1.1600 | |
290 | W | K | 0.0000 | |
291 | Y | K | -0.7038 | |
292 | V | K | -1.0009 | |
295 | D | K | -2.2384 | |
296 | G | K | -0.9077 | |
299 | V | K | 0.7341 | |
300 | E | K | -0.5921 | |
301 | V | K | -0.5171 | |
302 | H | K | -1.8821 | |
303 | N | K | -2.1790 | |
304 | A | K | -1.7665 | |
305 | K | K | -2.5200 | |
306 | T | K | -2.0490 | |
307 | K | K | -2.8226 | |
308 | P | K | -2.7481 | |
309 | R | K | -4.0058 | |
310 | E | K | -3.9694 | |
311 | E | K | -3.4060 | |
312 | Q | K | -1.9828 | |
313 | Y | K | -0.1059 | |
314 | N | K | -1.2772 | |
317 | S | K | -1.2302 | |
318 | T | K | -2.2296 | |
319 | Y | K | 0.0000 | |
320 | R | K | -2.8370 | |
321 | V | K | 0.0000 | |
322 | V | K | 0.0000 | |
323 | S | K | 0.0000 | |
324 | V | K | 0.0000 | |
325 | L | K | 0.0000 | |
326 | T | K | -0.5889 | |
327 | V | K | 0.0000 | |
328 | L | K | 0.3752 | |
329 | H | K | -0.1278 | |
330 | Q | K | -1.4022 | |
331 | D | K | -1.3106 | |
332 | W | K | 0.0000 | |
333 | L | K | -0.9913 | |
334 | N | K | -2.1433 | |
335 | G | K | -2.1801 | |
336 | K | K | -2.4161 | |
337 | E | K | -2.5710 | |
338 | Y | K | 0.0000 | |
339 | K | K | -1.8588 | |
340 | C | K | 0.0000 | |
341 | K | K | -1.6419 | |
342 | V | K | 0.0000 | |
343 | S | K | -1.4157 | |
344 | N | K | 0.0000 | |
345 | K | K | -2.5204 | |
346 | A | K | -1.2209 | |
347 | L | K | -0.1149 | |
348 | P | K | -0.2334 | |
349 | A | K | -0.6209 | |
350 | P | K | -0.8889 | |
351 | I | K | -0.8056 | |
352 | E | K | -2.1374 | |
353 | K | K | -1.2995 | |
354 | T | K | -1.1029 | |
355 | I | K | -0.3640 | |
357 | S | K | -1.2925 | |
358 | K | K | -1.3176 | |
359 | A | K | -1.1777 | |
360 | K | K | -2.3691 | |
361 | G | K | -2.0552 | |
363 | Q | K | -2.3185 | |
364 | P | K | -2.1370 | |
365 | R | K | -2.6487 | |
366 | E | K | -2.9708 | |
367 | P | K | 0.0000 | |
368 | Q | K | -1.2482 | |
369 | V | K | 0.0000 | |
370 | Y | K | 0.0000 | |
371 | T | K | 0.0000 | |
372 | L | K | 0.0000 | |
373 | P | K | -0.4026 | |
374 | P | K | -0.8510 | |
375 | S | K | -1.3965 | |
376 | R | K | -2.4905 | |
377 | D | K | -2.4790 | |
378 | E | K | 0.0000 | |
381 | L | K | -1.8236 | |
382 | T | K | -1.6575 | |
383 | K | K | -2.4255 | |
384 | N | K | -2.7145 | |
385 | Q | K | -2.4880 | |
386 | V | K | 0.0000 | |
387 | S | K | 0.0000 | |
388 | L | K | 0.0000 | |
389 | T | K | 0.0000 | |
390 | C | K | 0.0000 | |
391 | L | K | 0.0000 | |
392 | V | K | 0.0000 | |
393 | K | K | -0.5510 | |
394 | G | K | -1.1300 | |
395 | F | K | 0.0000 | |
396 | Y | K | -1.3216 | |
397 | P | K | 0.0000 | |
398 | S | K | -0.2627 | |
399 | D | K | -1.0856 | |
400 | I | K | 0.0000 | |
401 | A | K | 0.0000 | |
402 | V | K | -0.2810 | |
405 | E | K | -0.8062 | |
406 | W | K | 0.0000 | |
407 | E | K | -1.5527 | |
408 | S | K | 0.0000 | |
410 | N | K | -1.7970 | |
411 | G | K | -1.8542 | |
414 | Q | K | -2.2735 | |
415 | P | K | -1.8194 | |
416 | E | K | -1.7264 | |
417 | N | K | -1.9247 | |
418 | N | K | -1.2792 | |
419 | Y | K | -0.8898 | |
420 | K | K | -0.9664 | |
421 | T | K | -0.3720 | |
422 | T | K | 0.0000 | |
423 | P | K | -0.2550 | |
424 | P | K | 0.0387 | |
425 | V | K | 0.0000 | |
426 | L | K | 0.8290 | |
427 | D | K | -0.5971 | |
428 | S | K | -1.2838 | |
430 | D | K | -1.8864 | |
433 | G | K | -0.8875 | |
434 | S | K | 0.0000 | |
435 | F | K | 0.0632 | |
436 | F | K | 0.0000 | |
437 | L | K | 0.0000 | |
438 | Y | K | 0.0000 | |
439 | S | K | 0.0000 | |
440 | K | K | 0.0000 | |
441 | L | K | 0.0000 | |
442 | T | K | -0.9185 | |
443 | V | K | 0.0000 | |
444 | D | K | -2.8102 | |
445 | K | K | -2.8663 | |
446 | S | K | -2.4439 | |
447 | R | K | -2.1969 | |
448 | W | K | 0.0000 | |
449 | Q | K | -2.4417 | |
450 | Q | K | -2.1445 | |
451 | G | K | -1.0861 | |
452 | N | K | -0.6019 | |
453 | V | K | 0.7172 | |
454 | F | K | 0.0000 | |
455 | S | K | -0.6813 | |
456 | C | K | 0.0000 | |
457 | S | K | 0.0000 | |
458 | V | K | 0.0000 | |
459 | M | K | 0.0000 | |
460 | H | K | 0.0000 | |
461 | E | K | -1.3105 | |
462 | A | K | -1.8672 | |
463 | L | K | 0.0000 | |
464 | H | K | -1.9427 | |
465 | N | K | -1.8034 | |
466 | H | K | -1.3812 | |
467 | Y | K | -0.3004 | |
468 | T | K | -0.7304 | |
469 | Q | K | -1.1829 | |
470 | K | K | -1.1985 | |
471 | S | K | -0.4451 | |
472 | L | K | 0.0000 | |
473 | S | K | 0.0511 | |
474 | L | K | -0.1394 | |
475 | S | K | -0.2090 |
Calculations for various pH values
This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.
pH |
Average A4D Score |
Max A4D Score |
|||
4.0 | -0.5771 | 4.5184 | View | CSV | PDB |
4.5 | -0.6292 | 4.5184 | View | CSV | PDB |
5.0 | -0.69 | 4.5184 | View | CSV | PDB |
5.5 | -0.7461 | 4.5184 | View | CSV | PDB |
6.0 | -0.7828 | 4.5184 | View | CSV | PDB |
6.5 | -0.7906 | 4.5184 | View | CSV | PDB |
7.0 | -0.7715 | 4.5184 | View | CSV | PDB |
7.5 | -0.736 | 4.5184 | View | CSV | PDB |
8.0 | -0.6918 | 4.5184 | View | CSV | PDB |
8.5 | -0.641 | 4.5184 | View | CSV | PDB |
9.0 | -0.5834 | 4.6105 | View | CSV | PDB |