Chain sequence(s) |
A: MAKSTILVALLALVLVAHASAMRRERGRQGDSSSCERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQRCMCEALQQIMENQCDRLQDRQMVQQFKRELMNLPQQCNFRAPQRCDLDVSGGRC
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.7304 | |
2 | A | A | 0.3247 | |
3 | K | A | -0.2689 | |
4 | S | A | 0.8122 | |
5 | T | A | 1.8301 | |
6 | I | A | 3.4540 | |
7 | L | A | 3.8302 | |
8 | V | A | 4.1296 | |
9 | A | A | 3.8726 | |
10 | L | A | 5.2277 | |
11 | L | A | 5.2452 | |
12 | A | A | 4.3674 | |
13 | L | A | 4.5116 | |
14 | V | A | 4.1511 | |
15 | L | A | 3.8631 | |
16 | V | A | 3.6511 | |
17 | A | A | 2.1205 | |
18 | H | A | 0.5155 | |
19 | A | A | 0.5336 | |
20 | S | A | -0.6059 | |
21 | A | A | -1.3212 | |
22 | M | A | -1.6726 | |
23 | R | A | -3.9708 | |
24 | R | A | -4.6267 | |
25 | E | A | -4.8977 | |
26 | R | A | -5.1452 | |
27 | G | A | -4.4483 | |
28 | R | A | -4.9578 | |
29 | Q | A | -4.2201 | |
30 | G | A | -3.2471 | |
31 | D | A | -3.5122 | |
32 | S | A | -2.7698 | |
33 | S | A | -2.1778 | |
34 | S | A | -2.2841 | |
35 | C | A | 0.0000 | |
36 | E | A | -4.0806 | |
37 | R | A | -3.9991 | |
38 | Q | A | -3.5427 | |
39 | V | A | 0.0000 | |
40 | D | A | -4.1510 | |
41 | R | A | -3.9792 | |
42 | V | A | -3.2008 | |
43 | N | A | -2.9763 | |
44 | L | A | 0.0000 | |
45 | K | A | -2.6177 | |
46 | P | A | -2.2355 | |
47 | C | A | 0.0000 | |
48 | E | A | 0.0000 | |
49 | Q | A | -1.2304 | |
50 | H | A | 0.0000 | |
51 | I | A | 0.0000 | |
52 | M | A | -0.5306 | |
53 | Q | A | -1.0748 | |
54 | R | A | -1.6914 | |
55 | I | A | 0.0000 | |
56 | M | A | -1.4816 | |
57 | G | A | -2.5314 | |
58 | E | A | -3.2184 | |
59 | Q | A | -3.0916 | |
60 | E | A | -3.3903 | |
61 | Q | A | -2.5039 | |
62 | Y | A | -1.0199 | |
63 | D | A | -1.6377 | |
64 | S | A | -0.5918 | |
65 | Y | A | 0.1763 | |
66 | D | A | -1.0388 | |
67 | I | A | 0.2859 | |
68 | R | A | -1.2307 | |
69 | S | A | -1.1531 | |
70 | T | A | -1.4661 | |
71 | R | A | -2.6496 | |
72 | S | A | -2.1061 | |
73 | S | A | -2.4590 | |
74 | D | A | -3.4172 | |
75 | Q | A | -3.1133 | |
76 | Q | A | -2.7169 | |
77 | Q | A | -3.4061 | |
78 | R | A | -4.2077 | |
79 | C | A | 0.0000 | |
80 | C | A | -2.9623 | |
81 | D | A | -3.9942 | |
82 | E | A | -3.6252 | |
83 | L | A | 0.0000 | |
84 | N | A | -3.8225 | |
85 | E | A | -3.8588 | |
86 | M | A | 0.0000 | |
87 | E | A | -3.3941 | |
88 | N | A | -3.3428 | |
89 | T | A | -2.3377 | |
90 | Q | A | -2.6041 | |
91 | R | A | -2.6371 | |
92 | C | A | 0.0000 | |
93 | M | A | 0.0000 | |
94 | C | A | -1.4878 | |
95 | E | A | -1.7573 | |
96 | A | A | 0.0000 | |
97 | L | A | 0.0000 | |
98 | Q | A | -1.9490 | |
99 | Q | A | -1.9019 | |
100 | I | A | 0.0000 | |
101 | M | A | 0.0000 | |
102 | E | A | -3.1171 | |
103 | N | A | -2.6434 | |
104 | Q | A | 0.0000 | |
105 | C | A | -2.8960 | |
106 | D | A | -3.6461 | |
107 | R | A | -3.4932 | |
108 | L | A | 0.0000 | |
109 | Q | A | -3.6953 | |
110 | D | A | -3.9057 | |
111 | R | A | -3.7923 | |
112 | Q | A | -3.2629 | |
113 | M | A | -2.6129 | |
114 | V | A | -2.7268 | |
115 | Q | A | -3.1069 | |
116 | Q | A | -2.4075 | |
117 | F | A | 0.0000 | |
118 | K | A | -2.5568 | |
119 | R | A | -2.6988 | |
120 | E | A | -1.7906 | |
121 | L | A | 0.0000 | |
122 | M | A | -1.2424 | |
123 | N | A | -1.6079 | |
124 | L | A | 0.0000 | |
125 | P | A | 0.0000 | |
126 | Q | A | -2.2612 | |
127 | Q | A | -1.5381 | |
128 | C | A | -2.0043 | |
129 | N | A | -2.2639 | |
130 | F | A | -2.1890 | |
131 | R | A | -2.8120 | |
132 | A | A | -2.3474 | |
133 | P | A | 0.0000 | |
134 | Q | A | -2.7252 | |
135 | R | A | -3.0323 | |
136 | C | A | -2.5330 | |
137 | D | A | -2.9889 | |
138 | L | A | 0.0000 | |
139 | D | A | -3.0825 | |
140 | V | A | -2.2358 | |
141 | S | A | -1.4511 | |
142 | G | A | -1.5615 | |
143 | G | A | -1.9771 | |
144 | R | A | -3.0278 | |
145 | C | A | -2.7925 |