Chain sequence(s) |
A: MAEEIKNVPEQEVPKVATEESSAEVTDRGLFDFLGKKKDETKPEETPIASEFEQKVHISEPEPEVKHESLLEKLHRSDSSSSSSSEEEGSDGEKRKKKKEKKKPTTEVEVKEEEKKGFMEKLKEKLPGHKKPEDGSAVAAAPVVVPPPVEEAHPVEKKGILEKIKEKLPGYHPKTTVEEEKKDKE
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.3581 | |
2 | A | A | -0.5513 | |
3 | E | A | -2.0708 | |
4 | E | A | -2.2836 | |
5 | I | A | -0.3550 | |
6 | K | A | -1.6734 | |
7 | N | A | -1.1791 | |
8 | V | A | 0.1074 | |
9 | P | A | -1.4625 | |
10 | E | A | -2.5117 | |
11 | Q | A | -2.3049 | |
12 | E | A | -2.4668 | |
13 | V | A | -0.0985 | |
14 | P | A | -0.3164 | |
15 | K | A | -0.6601 | |
16 | V | A | 0.8724 | |
17 | A | A | -0.4972 | |
18 | T | A | -1.2333 | |
19 | E | A | -2.5659 | |
20 | E | A | -2.8964 | |
21 | S | A | -2.1277 | |
22 | S | A | -1.4695 | |
23 | A | A | -1.0606 | |
24 | E | A | -1.3132 | |
25 | V | A | -0.0079 | |
26 | T | A | -1.4247 | |
27 | D | A | -2.2488 | |
28 | R | A | -1.9247 | |
29 | G | A | -0.4015 | |
30 | L | A | 1.7426 | |
31 | F | A | 2.3899 | |
32 | D | A | 0.3875 | |
33 | F | A | 2.2040 | |
34 | L | A | 1.6310 | |
35 | G | A | -0.8293 | |
36 | K | A | -3.0687 | |
37 | K | A | -3.7521 | |
38 | K | A | -4.5037 | |
39 | D | A | -4.4511 | |
40 | E | A | -3.8303 | |
41 | T | A | -2.8516 | |
42 | K | A | -3.3607 | |
43 | P | A | -2.8024 | |
44 | E | A | -3.4271 | |
45 | E | A | -2.8590 | |
46 | T | A | -1.0907 | |
47 | P | A | -0.2897 | |
48 | I | A | 1.4829 | |
49 | A | A | 0.4882 | |
50 | S | A | -0.6674 | |
51 | E | A | -1.5642 | |
52 | F | A | 0.0011 | |
53 | E | A | -2.2262 | |
54 | Q | A | -2.3714 | |
55 | K | A | -1.7114 | |
56 | V | A | 0.4284 | |
57 | H | A | -0.5930 | |
58 | I | A | 0.9395 | |
59 | S | A | -0.6163 | |
60 | E | A | -2.0702 | |
61 | P | A | -2.0662 | |
62 | E | A | -2.7887 | |
63 | P | A | -2.1121 | |
64 | E | A | -2.0819 | |
65 | V | A | -0.7744 | |
66 | K | A | -2.3708 | |
67 | H | A | -2.2536 | |
68 | E | A | -2.6766 | |
69 | S | A | -1.0373 | |
70 | L | A | 0.7155 | |
71 | L | A | 0.7863 | |
72 | E | A | -1.9408 | |
73 | K | A | -1.7460 | |
74 | L | A | -0.1538 | |
75 | H | A | -2.2594 | |
76 | R | A | -2.9236 | |
77 | S | A | -2.4203 | |
78 | D | A | -2.8071 | |
79 | S | A | -1.7988 | |
80 | S | A | -1.1257 | |
81 | S | A | -0.9136 | |
82 | S | A | -0.6225 | |
83 | S | A | -0.8146 | |
84 | S | A | -1.2670 | |
85 | S | A | -2.0506 | |
86 | E | A | -3.4716 | |
87 | E | A | -3.8490 | |
88 | E | A | -3.7864 | |
89 | G | A | -2.7993 | |
90 | S | A | -2.4499 | |
91 | D | A | -3.1602 | |
92 | G | A | -2.9896 | |
93 | E | A | -4.0857 | |
94 | K | A | -4.5170 | |
95 | R | A | -4.6542 | |
96 | K | A | -4.5513 | |
97 | K | A | -4.4248 | |
98 | K | A | -4.3874 | |
99 | K | A | -4.2096 | |
100 | E | A | -4.4226 | |
101 | K | A | -4.2629 | |
102 | K | A | -3.8521 | |
103 | K | A | -3.2846 | |
104 | P | A | -1.8473 | |
105 | T | A | -1.3143 | |
106 | T | A | -0.9733 | |
107 | E | A | -1.6614 | |
108 | V | A | -0.6699 | |
109 | E | A | -2.4415 | |
110 | V | A | -1.5770 | |
111 | K | A | -3.8367 | |
112 | E | A | -4.7936 | |
113 | E | A | -4.5697 | |
114 | E | A | -4.3740 | |
115 | K | A | -4.3521 | |
116 | K | A | -4.1754 | |
117 | G | A | -2.7286 | |
118 | F | A | -1.0296 | |
119 | M | A | -1.4680 | |
120 | E | A | -3.2134 | |
121 | K | A | -2.9026 | |
122 | L | A | -1.2814 | |
123 | K | A | -3.5254 | |
124 | E | A | -3.8891 | |
125 | K | A | -2.9488 | |
126 | L | A | -1.4549 | |
127 | P | A | -1.3861 | |
128 | G | A | -2.1939 | |
129 | H | A | -3.1534 | |
130 | K | A | -3.8578 | |
131 | K | A | -3.9758 | |
132 | P | A | -3.0973 | |
133 | E | A | -3.7195 | |
134 | D | A | -3.2248 | |
135 | G | A | -1.7582 | |
136 | S | A | -0.8023 | |
137 | A | A | 0.5172 | |
138 | V | A | 1.7418 | |
139 | A | A | 0.9651 | |
140 | A | A | 0.6792 | |
141 | A | A | 0.7992 | |
142 | P | A | 1.3524 | |
143 | V | A | 3.0515 | |
144 | V | A | 3.3478 | |
145 | V | A | 2.9212 | |
146 | P | A | 1.3512 | |
147 | P | A | 0.4489 | |
148 | P | A | -0.2163 | |
149 | V | A | 0.1546 | |
150 | E | A | -2.0945 | |
151 | E | A | -2.5626 | |
152 | A | A | -1.3853 | |
153 | H | A | -1.7245 | |
154 | P | A | -0.9643 | |
155 | V | A | -0.3890 | |
156 | E | A | -2.6261 | |
157 | K | A | -2.9098 | |
158 | K | A | -3.1093 | |
159 | G | A | -1.0773 | |
160 | I | A | 1.1709 | |
161 | L | A | 0.7752 | |
162 | E | A | -2.3151 | |
163 | K | A | -2.0319 | |
164 | I | A | 0.4446 | |
165 | K | A | -1.3478 | |
166 | E | A | -2.8929 | |
167 | K | A | -2.0824 | |
168 | L | A | -0.3407 | |
169 | P | A | -0.6543 | |
170 | G | A | -0.9028 | |
171 | Y | A | -0.4200 | |
172 | H | A | -1.5990 | |
173 | P | A | -1.0975 | |
174 | K | A | -2.2117 | |
175 | T | A | -1.3014 | |
176 | T | A | -0.4750 | |
177 | V | A | -0.2853 | |
178 | E | A | -3.3211 | |
179 | E | A | -4.3819 | |
180 | E | A | -5.1358 | |
181 | K | A | -5.3623 | |
182 | K | A | -5.1011 | |
183 | D | A | -4.7753 | |
184 | K | A | -4.5665 | |
185 | E | A | -3.4709 |