Project name: NP_Me2

Status: done

Started: 2026-06-10 09:53:25
Chain sequence(s) A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDESLLTEVETPIRNEWGLTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDESLLTEVETPIRNEWGLTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDANDATDGNDISLELVGDFDSHHHHHH
input PDB
Selected Chain(s) A,B
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage A: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDESLLTEVETPIRNEWGLTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGAND

RETGGQATDTPVYNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQTSENQQ

RLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDA

NDATDGNDISLELVGDFDSHHHHHH


B: SSVLKTFERFTIQQELQEQSEDTPIPLETIRPTIRVFVINNNDPVVRSRLLFFNLRIIMSNTAREGHRAGALLSLLSLPSAAMSNHIKLAMHSPEASIDRVEITGFENNSFRVIPDARTSTMSRGEVLAFEALAEDIPDESLLTEVETPIRNEWGLTLNHQTPFVNLQNDVEDDIFDETEKFLDVCYSVLMQAWIVTCKCMTAPDQPPVSVAKRMAKYQQQGRINACRYVLQPEAQRLIQNAIRKSMVVRHFMTYELQLSQSRSLLANRYYAMVGDIGKYIEHSGMGGFFLTLKYGLGTRWPTLALAAFSGELQKLKALMLHYQSLGPMAKYMALLESPKLMDFVPSEYPLVYSYAMGIGTVLDTNMRNYAYGRSYLNPQYFQLGVETARKQQGAVDNRTAEDLGMTAADKADLTATISKLSLSQLPRGRQPISDPFAGANDRETGGQATDTPV

YNFNSLNNRRYDNYDSDSEDRIDNDQDQAIRENRGEPGQPNNQT

SENQQRLNLPVPQCTSGMSSEEFQHSMNQYIRAMHEQYRGSQDDDA

NDATDGNDISLELVGDFDSHHHHHH


(Red indicates removed residues)
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:00)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:00)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with all chain(s) selected           (00:00:00)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:00)
[INFO]       PDB:      Running AlphaCutter                                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:16)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:16)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:18:56)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/d0df06cf5eaa52/tmp/folded.pdb                 (00:18:56)
[INFO]       Main:     Simulation completed successfully.                                          (00:25:12)
Show buried residues

Minimal score value
-4.4199
Maximal score value
2.1329
Average score
-0.799
Total score value
-785.4295

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 S A 0.0844
2 S A 0.7548
3 V A 2.1329
4 L A 1.7831
5 K A -0.0944
6 T A 0.6601
7 F A 1.2611
8 E A -0.3086
9 R A -1.1115
10 F A 0.6567
11 T A -0.5377
12 I A -0.7054
13 Q A -1.9371
14 Q A -2.2195
15 E A -1.8235
16 L A -1.4906
17 Q A -3.1121
18 E A -3.6727
19 Q A -3.1818
20 S A -2.9910
21 E A -3.1770
22 D A -2.9474
23 T A -1.8528
24 P A 0.0732
25 I A 1.3705
26 P A 0.9016
27 L A 1.2458
28 E A -0.8101
29 T A -0.2761
30 I A 0.6026
31 R A -1.5351
32 P A -1.0526
33 T A -1.0856
34 I A 0.0000
35 R A -1.2524
36 V A 0.0000
37 F A 0.0000
38 V A 0.0000
39 I A 0.0000
40 N A -1.9191
41 N A -1.9299
42 N A -2.1248
43 D A -1.6651
44 P A -0.8572
45 V A 0.2660
46 V A -0.1149
47 R A 0.0000
48 S A 0.0000
49 R A -0.1219
50 L A 0.0000
51 L A 0.0000
52 F A 0.0000
53 F A 0.0000
54 N A 0.0000
55 L A 0.0000
56 R A -0.9001
57 I A 0.0000
58 I A 0.0000
59 M A 0.0000
60 S A 0.0000
61 N A -2.1212
62 T A -1.4651
63 A A 0.0000
64 R A -3.1301
65 E A -3.2969
66 G A -2.1845
67 H A -1.7336
68 R A -1.7615
69 A A 0.0000
70 G A 0.0000
71 A A 0.0000
72 L A 0.0000
73 L A 0.0000
74 S A 0.0000
75 L A 0.0000
76 L A 0.0000
77 S A 0.0000
78 L A 0.0000
79 P A 0.0000
80 S A 0.0000
81 A A -1.4573
82 A A -1.1243
83 M A 0.0000
84 S A -1.2188
85 N A -1.3685
86 H A 0.0000
87 I A 0.0000
88 K A -1.7582
89 L A -0.7174
90 A A 0.0000
91 M A -0.7649
92 H A -1.0753
93 S A 0.0000
94 P A -1.1891
95 E A -1.2891
96 A A 0.0000
97 S A -1.0967
98 I A 0.0000
99 D A -1.8143
100 R A -1.7246
101 V A 0.0000
102 E A 0.0000
103 I A 0.0000
104 T A -0.2854
105 G A 0.0000
106 F A -0.8077
107 E A -1.9830
108 N A -2.4470
109 N A -2.5310
110 S A -1.8570
111 F A 0.0000
112 R A -1.2606
113 V A 0.0000
114 I A 0.0556
115 P A -0.3862
116 D A -0.8232
117 A A -0.9247
118 R A -1.9411
119 T A -1.1493
120 S A -0.8642
121 T A -0.9208
122 M A 0.0000
123 S A -1.3233
124 R A -2.0660
125 G A -1.4594
126 E A -1.2495
127 V A 0.0000
128 L A -0.1847
129 A A -0.4734
130 F A 0.0000
131 E A -0.7704
132 A A -0.6810
133 L A -1.0541
134 A A 0.0000
135 E A -2.4190
136 D A -1.9181
137 I A 0.0000
138 P A -1.3843
139 D A -1.2827
140 E A -1.3178
141 S A -0.3806
142 L A 1.1511
143 L A 0.6517
144 T A -0.1112
145 E A -1.0696
146 V A 0.1253
147 E A -0.9488
148 T A -0.4089
149 P A -0.4247
150 I A 0.1551
151 R A -1.9161
152 N A -2.4756
153 E A -2.4361
154 W A -1.0373
155 G A -1.3622
156 L A -0.5750
157 T A -1.1620
158 L A 0.0000
159 N A -2.0153
160 H A -2.3812
161 Q A -2.3521
162 T A 0.0000
163 P A 0.0000
164 F A 0.0000
165 V A -0.1837
166 N A -1.5530
167 L A -0.8729
168 Q A -2.0427
169 N A -3.0133
170 D A -3.3322
171 V A 0.0000
172 E A -1.5936
173 D A -2.4732
174 D A -0.9500
175 I A 0.8951
176 F A 0.0000
177 D A -1.3715
178 E A -1.4130
179 T A -1.5230
180 E A -1.7179
181 K A -1.2986
182 F A 0.0000
183 L A 0.0000
184 D A -0.9462
185 V A 0.0000
186 C A 0.0000
187 Y A 0.0000
188 S A 0.0000
189 V A 0.0000
190 L A 0.0000
191 M A 0.0000
192 Q A 0.0000
193 A A 0.0000
194 W A 0.0000
195 I A 0.0000
196 V A 0.0000
197 T A 0.0000
198 C A -0.1282
199 K A -0.6222
200 C A 0.0000
201 M A -0.4081
202 T A -0.5336
203 A A -1.0123
204 P A -1.4855
205 D A -2.5106
206 Q A -2.0210
207 P A -0.8382
208 P A -0.4891
209 V A 0.7932
210 S A -0.2522
211 V A 0.0000
212 A A -0.5455
213 K A -1.6720
214 R A -1.3993
215 M A 0.0000
216 A A -1.4879
217 K A -1.7240
218 Y A 0.0000
219 Q A -1.5068
220 Q A -2.0672
221 Q A -1.5316
222 G A -1.4375
223 R A 0.0000
224 I A 0.0000
225 N A -0.6041
226 A A -0.1051
227 C A 0.5343
228 R A -0.6010
229 Y A 0.0000
230 V A 0.2154
231 L A 0.0000
232 Q A 0.0000
233 P A -0.1456
234 E A 0.0000
235 A A 0.0000
236 Q A -0.3388
237 R A -0.2170
238 L A 0.0000
239 I A 0.0000
240 Q A 0.0000
241 N A -1.1766
242 A A 0.0000
243 I A 0.0000
244 R A -1.8512
245 K A -2.3436
246 S A 0.0000
247 M A -0.7845
248 V A 0.0000
249 V A 0.0000
250 R A 0.0000
251 H A -0.1189
252 F A 0.0000
253 M A 0.0000
254 T A 0.0000
255 Y A 0.2728
256 E A 0.0000
257 L A 0.0000
258 Q A 0.0268
259 L A 0.0000
260 S A 0.0000
261 Q A -0.6721
262 S A -0.9063
263 R A -1.8611
264 S A -0.5196
265 L A 0.0000
266 L A -0.2518
267 A A -0.3916
268 N A -0.8258
269 R A -0.5151
270 Y A 0.0000
271 Y A 0.0000
272 A A 0.0000
273 M A 0.0000
274 V A 0.0000
275 G A -0.5515
276 D A -0.5680
277 I A 0.0000
278 G A 0.0000
279 K A -1.4308
280 Y A -0.5109
281 I A 0.0000
282 E A -0.9022
283 H A -0.7331
284 S A -0.6424
285 G A -0.4281
286 M A 0.0000
287 G A -0.2342
288 G A -0.0477
289 F A 0.0000
290 F A 0.0989
291 L A 0.1206
292 T A 0.0000
293 L A 0.0000
294 K A -0.4908
295 Y A 0.0000
296 G A 0.0000
297 L A 0.0000
298 G A 0.0000
299 T A 0.0000
300 R A -0.6850
301 W A 0.0000
302 P A -0.3016
303 T A 0.0557
304 L A 0.0000
305 A A 0.2225
306 L A 0.6218
307 A A 0.2725
308 A A 0.2045
309 F A 0.0000
310 S A -0.2869
311 G A -0.5521
312 E A -0.6564
313 L A -0.2545
314 Q A -0.5828
315 K A -0.9111
316 L A 0.0000
317 K A 0.0000
318 A A 0.0000
319 L A 0.0000
320 M A 0.0000
321 L A 0.1310
322 H A 0.0000
323 Y A 0.0000
324 Q A -0.3930
325 S A -0.6086
326 L A -0.4355
327 G A -0.4651
328 P A -0.6044
329 M A -0.0561
330 A A 0.0000
331 K A -0.7014
332 Y A 0.0000
333 M A 0.0000
334 A A -0.7797
335 L A 0.0000
336 L A -0.7026
337 E A -1.7429
338 S A -1.0182
339 P A -0.7432
340 K A -0.8869
341 L A -0.2782
342 M A 0.2017
343 D A -0.6536
344 F A 0.0000
345 V A 0.0874
346 P A 0.0000
347 S A -0.4699
348 E A -0.9283
349 Y A 0.0000
350 P A -0.2633
351 L A -0.0136
352 V A 0.0000
353 Y A 0.0000
354 S A 0.0000
355 Y A 0.0000
356 A A 0.0000
357 M A 0.0000
358 G A 0.0000
359 I A 0.0000
360 G A 0.0000
361 T A -0.5663
362 V A -0.3794
363 L A 0.0000
364 D A -0.7729
365 T A -1.3341
366 N A -1.9492
367 M A 0.0000
368 R A -2.6830
369 N A -2.3000
370 Y A -1.2138
371 A A -0.7332
372 Y A -0.7649
373 G A -0.7561
374 R A -1.3055
375 S A -0.7691
376 Y A -0.4730
377 L A 0.0000
378 N A -0.7186
379 P A -0.8536
380 Q A -1.3184
381 Y A -0.5353
382 F A -0.5382
383 Q A -1.2404
384 L A -0.6430
385 G A 0.0000
386 V A -1.1128
387 E A -1.9682
388 T A 0.0000
389 A A 0.0000
390 R A -2.9175
391 K A -2.9735
392 Q A -1.7970
393 Q A -1.4736
394 G A -1.1736
395 A A -0.8788
396 V A -0.6583
397 D A -1.8835
398 N A -3.0938
399 R A -3.6728
400 T A -2.6830
401 A A 0.0000
402 E A -3.9273
403 D A -3.7290
404 L A 0.0000
405 G A -2.4275
406 M A -1.5644
407 T A -0.8479
408 A A -0.5584
409 A A -0.8227
410 D A -1.4130
411 K A -1.3939
412 A A -1.1842
413 D A -2.1168
414 L A 0.0000
415 T A -1.0610
416 A A -1.2246
417 T A 0.0000
418 I A 0.0000
419 S A -0.9829
420 K A -1.4558
421 L A 0.0000
422 S A -0.2859
423 L A 0.9066
424 S A -0.0350
425 Q A -0.5874
426 L A 0.4783
427 P A -1.2215
428 R A -2.5302
429 G A -2.4947
430 R A -2.6881
431 Q A -2.0707
432 P A -0.7981
433 I A 0.5918
434 S A -0.3655
435 D A -1.0907
436 P A -0.4156
437 F A 0.0932
438 A A -0.8702
439 G A -1.4150
440 A A -1.3637
441 N A -2.6459
442 D A -3.3999
443 R A -3.1617
505 L A 0.9848
506 N A -0.2292
507 L A 0.6253
508 P A 0.4506
509 V A 1.5245
510 P A 0.0266
511 Q A -0.3918
512 C A 0.0737
513 T A -0.1002
514 S A -0.3343
515 G A -0.4759
516 M A -0.6362
517 S A -1.2523
518 S A -1.7022
519 E A -3.0519
520 E A -2.9163
521 F A -1.9745
522 Q A -3.0090
523 H A -3.0135
524 S A -1.9041
525 M A -1.3092
526 N A -2.5848
527 Q A -2.3684
528 Y A -0.8041
529 I A -0.8436
530 R A -2.7536
531 A A -1.6003
532 M A -1.1034
533 H A -2.0786
534 E A -2.9476
535 Q A -1.5363
536 Y A -0.8993
537 R A -2.8053
538 G A -2.7107
539 S A -2.6413
540 Q A -3.3050
541 D A -4.1607
542 D A -3.9539
543 D A -3.3475
544 A A -1.8331
1 S B -0.5410
2 S B -0.6487
3 V B -0.4984
4 L B -0.8607
5 K B -2.1410
6 T B -1.4102
7 F B -1.2135
8 E B -2.2982
9 R B -2.6639
10 F B 0.0000
11 T B -1.5673
12 I B -1.1914
13 Q B -1.6062
14 Q B -1.4505
15 E B -0.9880
16 L B -0.6007
17 Q B -2.2227
18 E B -1.9769
19 Q B -2.0344
20 S B -2.3845
21 E B -2.9742
22 D B -2.7663
23 T B -1.6387
24 P B -0.0670
25 I B 1.0727
26 P B 0.3986
27 L B -0.2643
28 E B -1.7708
29 T B 0.0000
30 I B 0.0000
31 R B -2.4315
32 P B 0.0000
33 T B -1.0671
34 I B 0.0000
35 R B -1.2493
36 V B 0.0000
37 F B 0.0000
38 V B 0.0000
39 I B 0.0000
40 N B -1.9221
41 N B -1.9543
42 N B -2.0509
43 D B -1.9761
44 P B -1.4276
45 V B -0.0110
46 V B -0.1408
47 R B 0.0000
48 S B 0.0000
49 R B -0.0737
50 L B 0.0000
51 L B 0.0000
52 F B 0.0000
53 F B 0.0000
54 N B 0.0000
55 L B 0.0000
56 R B -0.9598
57 I B 0.0000
58 I B 0.0000
59 M B 0.0000
60 S B 0.0000
61 N B -2.0191
62 T B -1.3848
63 A B 0.0000
64 R B -1.9202
65 E B -1.8329
66 G B -1.3466
67 H B -1.0713
68 R B -1.1200
69 A B 0.0000
70 G B 0.0000
71 A B 0.0000
72 L B 0.0000
73 L B 0.0000
74 S B 0.0000
75 L B 0.0000
76 L B 0.0000
77 S B 0.0000
78 L B 0.0000
79 P B -0.2558
80 S B -0.3839
81 A B -0.7078
82 A B -0.9358
83 M B 0.0000
84 S B -1.3832
85 N B -1.7085
86 H B -1.0271
87 I B 0.0000
88 K B -1.6988
89 L B -0.6813
90 A B 0.0000
91 M B -0.4580
92 H B -0.8489
93 S B 0.0000
94 P B -1.0424
95 E B -1.1662
96 A B 0.0000
97 S B -0.9813
98 I B -1.0507
99 D B -1.3910
100 R B -1.6270
101 V B 0.0000
102 E B 0.0000
103 I B 0.0000
104 T B -0.2625
105 G B 0.0000
106 F B -0.7846
107 E B -1.9768
108 N B -2.4548
109 N B -2.5394
110 S B -1.8498
111 F B 0.0000
112 R B -1.2597
113 V B 0.0000
114 I B 0.1107
115 P B -0.3539
116 D B -0.8083
117 A B -0.8976
118 R B -1.9417
119 T B -1.1585
120 S B -0.8076
121 T B -0.8119
122 M B -0.6629
123 S B -1.2579
124 R B -2.0503
125 G B -1.4439
126 E B -1.1090
127 V B 0.0000
128 L B -0.3691
129 A B -0.5439
130 F B 0.0000
131 E B -0.8417
132 A B -0.7915
133 L B 0.0000
134 A B 0.0000
135 E B -2.4983
136 D B -2.0162
137 I B 0.0000
138 P B -1.3686
139 D B -1.2179
140 E B -1.1787
141 S B -0.4106
142 L B 0.6529
143 L B 0.2868
144 T B -0.2745
145 E B -1.1478
146 V B 0.0689
147 E B -0.8539
148 T B -0.4892
149 P B -0.3576
150 I B 0.2669
151 R B -1.6349
152 N B -2.0678
153 E B -2.0953
154 W B -0.4198
155 G B -0.7521
156 L B -0.1945
157 T B -0.7465
158 L B 0.0000
159 N B -1.5965
160 H B -1.8451
161 Q B -2.1553
162 T B 0.0000
163 P B 0.0000
164 F B 0.0000
165 V B 0.1870
166 N B -0.5074
167 L B -0.1367
168 Q B -1.4905
169 N B -2.6969
170 D B -3.2413
171 V B 0.0000
172 E B 0.0000
173 D B -2.4447
174 D B -0.8652
175 I B 0.7559
176 F B 0.0000
177 D B -2.2466
178 E B -2.9644
179 T B -2.5839
180 E B -3.0058
181 K B -2.2710
182 F B 0.0000
183 L B -1.1833
184 D B -1.4379
185 V B 0.0000
186 C B 0.0000
187 Y B 0.0000
188 S B 0.0000
189 V B 0.0000
190 L B 0.0000
191 M B 0.0000
192 Q B 0.0000
193 A B 0.0000
194 W B 0.0000
195 I B 0.0000
196 V B 0.0000
197 T B 0.0000
198 C B -0.0683
199 K B -0.5600
200 C B 0.0000
201 M B -0.1659
202 T B -0.5721
203 A B -1.2050
204 P B -1.6498
205 D B -2.6402
206 Q B -2.0317
207 P B -0.8552
208 P B -0.3936
209 V B 0.9193
210 S B -0.0803
211 V B -0.1555
212 A B -0.4393
213 K B -1.6407
214 R B -1.3496
215 M B 0.0000
216 A B -1.6619
217 K B -2.2235
218 Y B 0.0000
219 Q B -2.1516
220 Q B -2.5527
221 Q B -2.5397
222 G B -2.1963
223 R B -2.2552
224 I B 0.0000
225 N B -0.9895
226 A B -0.2777
227 C B 0.3945
228 R B -0.4973
229 Y B 0.0000
230 V B 0.1948
231 L B 0.0000
232 Q B 0.0000
233 P B -0.0526
234 E B 0.0000
235 A B 0.0000
236 Q B -0.2676
237 R B 0.0000
238 L B -0.1192
239 I B 0.0000
240 Q B -0.5841
241 N B -0.9909
242 A B 0.0000
243 I B 0.0000
244 R B -1.1730
245 K B -1.6948
246 S B 0.0000
247 M B 0.0000
248 V B 0.0000
249 V B 0.0000
250 R B 0.0000
251 H B 0.0000
252 F B 0.0000
253 M B 0.0000
254 T B 0.0000
255 Y B 0.1640
256 E B 0.0000
257 L B 0.0000
258 Q B -0.4667
259 L B -0.1472
260 S B -0.7340
261 Q B -1.0721
262 S B -0.9120
263 R B -1.5123
264 S B -0.0776
265 L B 1.5624
266 L B 1.5127
267 A B -0.0685
268 N B -1.5169
269 R B -2.2322
270 Y B 0.0000
271 Y B -0.7532
272 A B -0.7785
273 M B 0.0000
274 V B 0.0000
275 G B -1.1670
276 D B -1.4213
277 I B 0.0000
278 G B 0.0000
279 K B -1.8523
280 Y B -0.5729
281 I B 0.0000
282 E B 0.0000
283 H B -0.7706
284 S B -0.6447
285 G B -0.5067
286 M B 0.0000
287 G B -0.1434
288 G B 0.0000
289 F B 0.0000
290 F B 0.1155
291 L B -0.1284
292 T B 0.0000
293 L B -0.4318
294 K B -1.5735
295 Y B 0.0000
296 G B 0.0000
297 L B -0.6859
298 G B -1.2362
299 T B -1.3660
300 R B -2.3532
301 W B -0.9889
302 P B -1.2639
303 T B 0.0000
304 L B -0.3230
305 A B 0.0000
306 L B 0.0000
307 A B 0.0000
308 A B 0.0000
309 F B 0.0000
310 S B 0.0000
311 G B -0.6559
312 E B 0.0000
313 L B -0.2731
314 Q B -0.7985
315 K B -0.8282
316 L B 0.0000
317 K B -0.7731
318 A B 0.0000
319 L B 0.0000
320 M B 0.1140
321 L B 0.4365
322 H B 0.0000
323 Y B -0.2645
324 Q B -0.7835
325 S B -0.4639
326 L B -0.5362
327 G B -0.6078
328 P B -0.6701
329 M B -0.4010
330 A B 0.0000
331 K B -1.1003
332 Y B 0.0000
333 M B 0.0000
334 A B -0.3253
335 L B 0.0000
336 L B 0.0000
337 E B -0.3645
338 S B 0.0000
339 P B -0.4598
340 K B 0.0000
341 L B -0.0872
342 M B -0.3215
343 D B -0.8303
344 F B 0.0000
345 V B 0.0173
346 P B 0.0000
347 S B -0.5440
348 E B -0.6327
349 Y B 0.0000
350 P B 0.0000
351 L B 0.0000
352 V B 0.0000
353 Y B 0.0000
354 S B 0.0000
355 Y B 0.0000
356 A B 0.0000
357 M B 0.0000
358 G B 0.0000
359 I B 0.0000
360 G B 0.0000
361 T B 0.0000
362 V B -0.3062
363 L B 0.1724
364 D B -0.5221
365 T B -1.2798
366 N B -2.1346
367 M B 0.0000
368 R B -2.7091
369 N B -2.3642
370 Y B -1.2608
371 A B -0.7154
372 Y B -0.7810
373 G B -0.6762
374 R B -1.2047
375 S B -0.8997
376 Y B -0.7234
377 L B 0.0000
378 N B -0.5596
379 P B -0.3170
380 Q B -0.6563
381 Y B 0.0000
382 F B 0.0000
383 Q B -0.7964
384 L B 0.0000
385 G B 0.0000
386 V B -0.9391
387 E B -2.0119
388 T B 0.0000
389 A B 0.0000
390 R B -3.0902
391 K B -3.0023
392 Q B -2.2963
393 Q B -2.2073
394 G B -1.5375
395 A B -1.3075
396 V B -1.6104
397 D B -3.2521
398 N B -3.6668
399 R B -3.9338
400 T B -2.7654
401 A B 0.0000
402 E B -3.6363
403 D B -2.9443
404 L B -0.7185
405 G B -1.3626
406 M B -1.2010
407 T B -0.7494
408 A B -0.5596
409 A B -0.8687
410 D B -1.5208
411 K B -1.3670
412 A B -0.9826
413 D B -1.8706
414 L B -0.6747
415 T B -0.6798
416 A B -0.7606
417 T B -0.2593
418 I B 0.0827
419 S B -0.5940
420 K B -0.5518
421 L B 1.0475
422 S B 0.3589
423 L B 1.3996
424 S B 0.4848
425 Q B -0.2466
426 L B 0.6505
427 P B -1.3086
428 R B -2.5599
429 G B -2.4101
430 R B -2.4880
431 Q B -2.1321
432 P B -0.6968
433 I B 0.6798
434 S B -0.1659
435 D B -0.7089
436 P B 0.0123
437 F B 0.7627
438 A B -0.3107
439 G B -1.2319
440 A B -1.2583
441 N B -2.9154
442 D B -3.9806
443 R B -4.1285
444 E B -3.7065
445 T B -2.1014
446 G B -1.6401
447 G B -1.4503
448 Q B -1.7119
449 A B -1.1957
450 T B -1.3357
451 D B -1.8455
452 T B -0.5678
453 P B 0.0206
454 V B 1.4316
499 S B -1.5332
500 E B -3.7245
501 N B -3.9985
502 Q B -3.8499
503 Q B -3.7606
504 R B -3.1762
505 L B -1.5733
506 N B -1.2412
507 L B -0.0807
508 P B 0.6243
509 V B 1.4916
510 P B 0.1034
511 Q B -0.5537
512 C B -0.3115
513 T B -0.2125
514 S B -0.2722
515 G B -0.4361
516 M B -0.5334
517 S B -1.3644
518 S B -1.7528
519 E B -3.1419
520 E B -2.9765
521 F B -2.0614
522 Q B -2.9057
523 H B -3.0793
524 S B -2.0056
525 M B -1.3095
526 N B -2.6758
527 Q B -2.1407
528 Y B -0.6765
529 I B -0.6916
530 R B -2.5340
531 A B -1.2451
532 M B -0.8396
533 H B -1.7073
534 E B -2.9084
535 Q B -2.2310
536 Y B -1.2373
537 R B -2.9420
538 G B -3.5675
539 S B -3.3706
540 Q B -3.8619
541 D B -4.4199
542 D B -4.1898
543 D B -3.2607
544 A B -1.7425
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.5008 5.0328 View CSV PDB
4.5 -0.5652 4.9133 View CSV PDB
5.0 -0.6462 4.7454 View CSV PDB
5.5 -0.7314 4.5773 View CSV PDB
6.0 -0.8088 4.4431 View CSV PDB
6.5 -0.8693 4.3088 View CSV PDB
7.0 -0.91 4.1753 View CSV PDB
7.5 -0.9355 4.1392 View CSV PDB
8.0 -0.9515 4.1316 View CSV PDB
8.5 -0.9596 4.1291 View CSV PDB
9.0 -0.9582 4.1283 View CSV PDB