Chain sequence(s) |
D: TSSSTKKTQLQLEHLLLDLQMILNGINNYKNPKLTRMLTFKFYMPKKATELKHLQCLEEELKPLEEVLNLAQSKNFHLRPRDLISNINVIVLELKGSETTFMCEYADETATIVEFLNRWITFAQSIISTLT
input PDB |
Selected Chain(s) | D |
Distance of aggregation | 10 Å |
FoldX usage | Yes |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Mutated residues | LK18D |
Energy difference between WT (input) and mutated protein (by FoldX) | 1.6554 kcal/mol
CAUTION: Your mutation/s can destabilize the protein structure |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:01) [INFO] runJob: Starting aggrescan3d job on: input.pdb with D chain(s) selected (00:00:01) [INFO] runJob: Creating pdb object from: input.pdb (00:00:01) [INFO] FoldX: Starting FoldX energy minimization (00:00:01) [INFO] FoldX: Building mutant model (00:02:39) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:03:01) [INFO] Main: Simulation completed successfully. (00:03:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
3 | T | D | -0.7120 | |
4 | S | D | -1.0924 | |
5 | S | D | -1.5189 | |
6 | S | D | -1.5191 | |
7 | T | D | -1.5075 | |
8 | K | D | -2.5020 | |
9 | K | D | -2.6220 | |
10 | T | D | -1.7649 | |
11 | Q | D | -1.4027 | |
12 | L | D | -1.0037 | |
13 | Q | D | -1.2037 | |
14 | L | D | 0.0000 | |
15 | E | D | -1.0720 | |
16 | H | D | -0.8103 | |
17 | L | D | 0.0000 | |
18 | K | D | -0.4020 | mutated: LK18D |
19 | L | D | 0.7283 | |
20 | D | D | 0.0662 | |
21 | L | D | 0.0000 | |
22 | Q | D | -0.4098 | |
23 | M | D | 0.2478 | |
24 | I | D | 0.0000 | |
25 | L | D | -0.7738 | |
26 | N | D | -1.4139 | |
27 | G | D | 0.0000 | |
28 | I | D | 0.0000 | |
29 | N | D | -1.3592 | |
30 | N | D | -1.1224 | |
31 | Y | D | 0.0366 | |
32 | K | D | -1.5815 | |
33 | N | D | 0.0000 | |
34 | P | D | -1.1789 | |
35 | K | D | -1.5016 | |
36 | L | D | -0.9371 | |
37 | T | D | -1.0202 | |
38 | R | D | -1.7508 | |
39 | M | D | 0.0000 | |
40 | L | D | -0.4053 | |
41 | T | D | -0.5029 | |
42 | F | D | -0.4613 | |
43 | K | D | -1.2913 | |
44 | F | D | 0.0000 | |
45 | Y | D | -0.3705 | |
46 | M | D | 0.0000 | |
47 | P | D | 0.0000 | |
48 | K | D | -3.0665 | |
49 | K | D | -2.9105 | |
50 | A | D | -2.1325 | |
51 | T | D | -1.5643 | |
52 | E | D | -2.4374 | |
53 | L | D | -1.5876 | |
54 | K | D | -1.9901 | |
55 | H | D | -1.8321 | |
56 | L | D | 0.0000 | |
57 | Q | D | -0.9277 | |
58 | C | D | 0.0000 | |
59 | L | D | 0.0000 | |
60 | E | D | -1.3797 | |
61 | E | D | -2.2643 | |
62 | E | D | 0.0000 | |
63 | L | D | 0.0000 | |
64 | K | D | -2.8125 | |
65 | P | D | -1.9596 | |
66 | L | D | 0.0000 | |
67 | E | D | -2.6907 | |
68 | E | D | -2.6160 | |
69 | V | D | 0.0000 | |
70 | L | D | 0.0000 | |
71 | N | D | -1.8532 | |
72 | L | D | -0.5475 | |
73 | A | D | -0.9606 | |
74 | Q | D | -1.3992 | |
75 | S | D | -1.8527 | |
76 | K | D | -2.3758 | |
77 | N | D | -2.0793 | |
78 | F | D | -0.7360 | |
79 | H | D | -1.8367 | |
80 | L | D | -1.7176 | |
81 | R | D | -3.0913 | |
82 | P | D | 0.0000 | |
83 | R | D | -3.5359 | |
84 | D | D | -3.3533 | |
85 | L | D | 0.0000 | |
86 | I | D | 0.0000 | |
87 | S | D | -1.2735 | |
88 | N | D | -1.0001 | |
89 | I | D | 0.0000 | |
90 | N | D | -0.1172 | |
91 | V | D | 1.2696 | |
92 | I | D | 0.2550 | |
93 | V | D | 0.0000 | |
94 | L | D | 0.1638 | |
95 | E | D | -1.1384 | |
96 | L | D | 0.0000 | |
97 | K | D | -1.6719 | |
98 | G | D | -1.5349 | |
99 | S | D | -1.6031 | |
100 | E | D | -2.1723 | |
101 | T | D | -1.0010 | |
102 | T | D | -0.4928 | |
103 | F | D | -0.0249 | |
104 | M | D | 0.8140 | |
105 | C | D | -0.6980 | |
106 | E | D | -1.5731 | |
107 | Y | D | -1.2611 | |
108 | A | D | -2.1752 | |
109 | D | D | -2.7953 | |
110 | E | D | -2.7924 | |
111 | T | D | -1.5131 | |
112 | A | D | 0.0000 | |
113 | T | D | -0.6219 | |
114 | I | D | 0.0000 | |
115 | V | D | -1.0945 | |
116 | E | D | -1.9929 | |
117 | F | D | 0.0000 | |
118 | L | D | 0.0000 | |
119 | N | D | -1.8048 | |
120 | R | D | -1.6799 | |
121 | W | D | 0.0000 | |
122 | I | D | 0.0000 | |
123 | T | D | -0.9009 | |
124 | F | D | 0.0000 | |
125 | A | D | 0.0000 | |
126 | Q | D | -1.0699 | |
127 | S | D | -0.7409 | |
128 | I | D | 0.0000 | |
129 | I | D | -0.4592 | |
130 | S | D | -0.3492 | |
131 | T | D | -0.1409 | |
132 | L | D | -0.2399 | |
133 | T | D | -0.2686 |