Chain sequence(s) |
A: DEAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKLENYKPKN
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | D | A | -3.2444 | |
2 | E | A | -3.4850 | |
3 | A | A | -2.6881 | |
4 | Q | A | -3.1473 | |
5 | F | A | -3.0195 | |
6 | K | A | -3.8387 | |
7 | E | A | -3.4996 | |
8 | C | A | -2.6226 | |
9 | Y | A | -3.0175 | |
10 | D | A | -3.6111 | |
11 | T | A | -2.5666 | |
12 | C | A | -2.9444 | |
13 | H | A | -2.6530 | |
14 | K | A | -3.8515 | |
15 | E | A | -4.1225 | |
16 | C | A | 0.0000 | |
17 | S | A | -2.6389 | |
18 | D | A | -4.0521 | |
19 | K | A | -3.7467 | |
20 | G | A | -2.2623 | |
21 | N | A | -1.2072 | |
22 | G | A | 0.3266 | |
23 | F | A | 1.7933 | |
24 | T | A | 1.2706 | |
25 | F | A | 1.7924 | |
26 | C | A | 0.0000 | |
27 | E | A | -0.3550 | |
28 | M | A | 0.1179 | |
29 | K | A | -1.1169 | |
30 | C | A | 0.0000 | |
31 | D | A | -2.2183 | |
32 | T | A | -1.4524 | |
33 | D | A | -1.8244 | |
34 | C | A | 0.0000 | |
35 | S | A | -0.5682 | |
36 | V | A | -0.0090 | |
37 | K | A | -1.9474 | |
38 | D | A | -1.6488 | |
39 | V | A | -0.2182 | |
40 | K | A | -2.0914 | |
41 | E | A | -2.9407 | |
42 | K | A | -2.5780 | |
43 | L | A | -1.0601 | |
44 | E | A | -2.6756 | |
45 | N | A | -2.4454 | |
46 | Y | A | -1.2493 | |
47 | K | A | -2.3997 | |
48 | P | A | -1.8940 | |
49 | K | A | -2.7198 | |
50 | N | A | -2.4005 |