Project name: VgADm1mut

Status: done

Started: 2025-08-08 16:21:50
Chain sequence(s) A: MSDQEAKPSTEDLGDKKEGEYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRIADNHTPKELGMEEEDVIEVYQEQTGGHSTVDNSRLYGWAPSKEYVYEFETQMLTGIPEIRSQYSGLKLSSKVRIQSFPDYSLRVQFVEPKFVTVNQEIPSIDGRLYVPSTHSEELPKAIYGPLVTPFEVHFKRGVIESLFVEKDEPVVVTNWKKALLSQIQTDLSGSREGHVQKLNHEVFPLVAKDSQEMKNRSFFHTKERTLHGDCKTTYTLHPKPLYQAHELEEQWRNHKIKVFETVPEYFQSIRSQKEIHEVMEESGRACTGKQYFRVTKTHNFDNCRKRPVFSAWSGIKSNCDVTRKKCDRAFNSIVSTRYIICGTPDLFVIRKATTENIISLSPTGFNTPEKLTSFSTVTLELRTILSTVSHQIPKPKTPKTVGNLFMEYPEHESFNSESISEQWTKGSIISPTNISGFTGFKSLSGFYPIHPMPTMDTAPTLLYPISLSKPELIRDVQEMMSKIVRETYEVPESCSSSSDLAGYIVSIAEALRPLSLTELKELDTEVHRFMEVRDKEAILTSQYLFYDILAMVGTNPSISYIKQLIGSDKIPIQYAPDVLESALRNIKTPTPELFNLVFTMVKTLKAKSPQLYYVSTVSFSDLLHRACINPSSMVAQFPVHVYGNFCNPETPFIKDQYITFLESQIQGGSQGSKSEKVVLINALGKLGHYKAVSTLVKFIQGKVSQEPMIRSLAVYALKRTAMQYPAKVKPILMSIINNPGEHPEVRIAAVSVLPFSSPSTTELQKIALRTWFEPSKQVTSFIYSTLKSLRTTQVPELMQFRNKVKSVIPMVRRTHSGIQFGGSGVEMVSKGEEDNMAIIKEFMRFKVHMEGSVNGHEFEIEGEGEGRPYEGTQTAKLKVTKGGPLPFAWDILSPQFMYGSKAYVKHPADIPDYLKLSFPEGFKWERVMNFEDGGVVTVTQDSSLQDGEFIYKVKLRGTNFPSDGPVMQKKTMGWEASSERMYPEDGALKGEIKQRLKLKDGGHYDAEVKTTYKAKKPVQLPGAYNVNIKLDITSHNEDYTIVEQYERAEGRHSTGGMDELYKGGSGVEHHHHHH
input PDB
Selected Chain(s) A
Distance of aggregation 10 Å
FoldX usage Yes
pH calculations Yes
alphaCutter usage No
Dynamic mode No
Automated mutations No
Downloads Download all the data
Simulation log
[INFO]       Logger:   Verbosity set to: 2 - [INFO]                                                (00:00:01)
[WARNING]    runJob:   Working directory already exists (possibly overwriting previous results -ow 
                       to prevent this behavior)                                                   (00:00:01)
[INFO]       runJob:   Starting aggrescan3d job on: input.pdb with A chain(s) selected             (00:00:01)
[INFO]       runJob:   Creating pdb object from: input.pdb                                         (00:00:01)
[INFO]       PDB-Info: The input structure is globular. Max score is recommended for pH analysis.  (00:00:06)
[INFO]       FoldX:    Starting FoldX energy minimization                                          (00:00:07)
[INFO]       Analysis: Starting Aggrescan4D on folded.pdb                                          (00:35:04)
[INFO]       agg3D:    Running pKa-ANI on                                                          
                       /STORAGE/DATA/lcbio/aggreskan/d5489ce815c81d6/tmp/folded.pdb                (00:35:04)
[INFO]       Main:     Simulation completed successfully.                                          (00:41:41)
Show buried residues

Minimal score value
-4.3593
Maximal score value
2.6841
Average score
-0.8213
Total score value
-921.5038

The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.

residue index residue name chain Aggrescan4D score mutation
1 M A 0.3008
2 S A -1.1798
3 D A -2.7028
4 Q A -3.1153
5 E A -3.4157
6 A A -2.3327
7 K A -2.5280
8 P A -1.6907
9 S A -1.5437
10 T A -1.5770
11 E A -2.4534
12 D A -2.3874
13 L A -0.8046
14 G A -2.1252
15 D A -3.5009
16 K A -3.9110
17 K A -4.3593
18 E A -3.8828
19 G A -3.1892
20 E A -2.5065
21 Y A -1.3584
22 I A 0.0000
23 K A -2.5115
24 L A 0.0000
25 K A -1.5738
26 V A 0.0000
27 I A -0.7786
28 G A -1.4432
29 Q A -2.0135
30 D A -2.0762
31 S A -1.5600
32 S A 0.0000
33 E A -1.4833
34 I A 0.0000
35 H A -1.3819
36 F A -1.3220
37 K A -2.1043
38 V A 0.0000
39 K A -1.2321
40 M A -1.8140
41 T A -1.1901
42 T A -1.4103
43 H A -2.5221
44 L A 0.0000
45 K A -2.7647
46 K A -2.8828
47 L A 0.0000
48 K A 0.0000
49 E A -2.4323
50 S A -1.6475
51 Y A 0.0000
52 C A 0.0000
53 Q A -1.8322
54 R A -1.5013
55 Q A 0.0000
56 G A -1.0664
57 V A 0.0000
58 P A -1.2038
59 M A -1.1925
60 N A -1.5679
61 S A -0.9769
62 L A 0.0000
63 R A -1.4781
64 F A 0.0000
65 L A -1.5094
66 F A 0.0000
67 E A -2.5675
68 G A -2.2341
69 Q A -2.5024
70 R A -2.1129
71 I A 0.0000
72 A A -1.4694
73 D A -2.3951
74 N A -2.5364
75 H A -2.1812
76 T A -2.1560
77 P A 0.0000
78 K A -3.2620
79 E A -2.9250
80 L A -2.0090
81 G A -1.9772
82 M A 0.0000
83 E A -3.4386
84 E A -3.7487
85 E A -3.5785
86 D A -2.6040
87 V A -1.1105
88 I A 0.0000
89 E A -1.6031
90 V A 0.0000
91 Y A -0.8519
92 Q A -1.0259
93 E A -1.4420
94 Q A -1.9167
95 T A -1.5011
96 G A -1.4246
97 G A -1.4836
98 H A -1.5079
99 S A -0.8614
100 T A -0.5634
101 V A 0.0203
102 D A -1.0561
103 N A -1.0329
104 S A -0.8602
105 R A -1.2275
106 L A 0.0000
107 Y A 0.0000
108 G A 0.0000
109 W A 0.0000
110 A A -0.2103
111 P A -0.3759
112 S A -0.5004
113 K A -0.6196
114 E A 0.0000
115 Y A 0.0000
116 V A 0.0000
117 Y A 0.0000
118 E A -1.0589
119 F A 0.0000
120 E A -0.7268
121 T A 0.0000
122 Q A 0.0000
123 M A 0.3029
124 L A 0.0000
125 T A -0.1376
126 G A 0.0000
127 I A 0.0000
128 P A -1.5632
129 E A -2.1628
130 I A -1.3792
131 R A -1.7938
132 S A -1.5554
133 Q A -2.1739
134 Y A 0.0000
135 S A -0.9822
136 G A -0.3361
137 L A 0.2556
138 K A -0.2452
139 L A 0.0000
140 S A -1.0747
141 S A 0.0000
142 K A -1.0449
143 V A 0.0000
144 R A 0.0000
145 I A 0.0000
146 Q A 0.0000
147 S A 0.0000
148 F A 0.0000
149 P A -0.9162
150 D A -1.0562
151 Y A -0.4273
152 S A 0.0000
153 L A 0.0000
154 R A -0.8072
155 V A 0.0000
156 Q A -0.2966
157 F A 0.0000
158 V A 0.0000
159 E A -1.4161
160 P A 0.0000
161 K A -2.5654
162 F A 0.0000
163 V A 0.0000
164 T A -0.5418
165 V A 0.0000
166 N A -1.6855
167 Q A -1.4037
168 E A -1.4657
169 I A 0.0000
170 P A 0.0000
171 S A -0.3838
172 I A 0.0910
173 D A -0.7936
174 G A -1.0770
175 R A -1.3618
176 L A 0.0000
177 Y A 0.5562
178 V A 0.0000
179 P A -0.1117
180 S A -0.6626
181 T A -0.7006
182 H A -1.4598
183 S A -1.5655
184 E A 0.0000
185 E A -2.5252
186 L A 0.0000
187 P A -1.1407
188 K A -1.8496
189 A A -0.7201
190 I A 0.0000
191 Y A -0.7275
192 G A -0.3689
193 P A -0.4218
194 L A 0.0000
195 V A 0.1761
196 T A -0.1668
197 P A -0.7170
198 F A 0.0000
199 E A 0.0000
200 V A 0.0000
201 H A -0.4770
202 F A 0.0000
203 K A -0.7892
204 R A 0.0000
205 G A 0.0000
206 V A -0.2789
207 I A 0.0000
208 E A -0.8986
209 S A -0.4024
210 L A 0.0000
211 F A -0.6587
212 V A 0.0000
213 E A -2.3550
214 K A -3.0615
215 D A -2.7229
216 E A 0.0000
217 P A -0.9120
218 V A -0.1180
219 V A 0.1707
220 V A 0.0000
221 T A 0.0000
222 N A 0.0000
223 W A 0.0000
224 K A 0.0000
225 K A 0.0000
226 A A 0.0000
227 L A 0.0000
228 L A 0.0000
229 S A -0.0898
230 Q A 0.0000
231 I A 0.0000
232 Q A 0.0000
233 T A 0.0000
234 D A 0.0000
235 L A 0.0000
236 S A 0.0000
237 G A 0.0000
238 S A 0.0000
239 R A 0.0000
240 E A -1.2151
241 G A -1.2663
242 H A -1.5308
243 V A -1.6025
244 Q A -2.5916
245 K A -2.7686
246 L A -1.8057
247 N A -2.2891
248 H A -1.8849
249 E A -2.2756
250 V A -0.9767
251 F A 0.0963
252 P A 0.2971
253 L A 0.4563
254 V A 0.8952
255 A A -0.7286
256 K A -2.1928
257 D A -3.0393
258 S A -2.5696
259 Q A -2.7317
260 E A -2.5541
261 M A -0.9781
262 K A -1.2122
263 N A -0.7623
264 R A -0.4481
265 S A -0.1910
266 F A 0.0000
267 F A 0.0000
268 H A 0.0000
269 T A 0.0000
270 K A -1.1634
271 E A 0.0000
272 R A -1.7026
273 T A 0.0000
274 L A -0.3739
275 H A -0.6409
276 G A 0.0000
277 D A 0.0000
278 C A 0.0000
279 K A -0.7943
280 T A 0.0000
281 T A 0.0000
282 Y A 0.0000
283 T A 0.0000
284 L A 0.0000
285 H A 0.0000
286 P A 0.0780
287 K A 0.2005
288 P A 0.0000
289 L A 1.2905
290 Y A 0.6896
291 Q A -0.3753
292 A A 0.0000
293 H A -1.3146
294 E A -1.8938
295 L A -1.4739
296 E A 0.0000
297 E A -3.3544
298 Q A -2.8191
299 W A 0.0000
300 R A -3.6103
301 N A -2.7190
302 H A -2.0498
303 K A -1.7773
304 I A 0.1817
305 K A -1.4134
306 V A 0.0000
307 F A -0.3806
308 E A -1.8340
309 T A -1.2267
310 V A 0.0000
311 P A 0.0000
312 E A -1.7748
313 Y A 0.2942
314 F A 0.0000
315 Q A -1.3791
316 S A -0.1873
317 I A 0.8888
318 R A -0.6565
319 S A -1.7539
320 Q A -3.0104
321 K A -3.6557
322 E A -3.3687
323 I A 0.0000
324 H A -3.3928
325 E A -3.8618
326 V A 0.0000
327 M A 0.0000
328 E A -3.2635
329 E A -2.8398
330 S A 0.0000
331 G A -2.5774
332 R A -2.9372
333 A A -1.5650
334 C A 0.0000
335 T A -1.6751
336 G A -1.5778
337 K A -1.9024
338 Q A -1.1166
339 Y A 0.0000
340 F A -0.2649
341 R A -0.5029
342 V A 0.0000
343 T A 0.0000
344 K A 0.0000
345 T A 0.0000
346 H A 0.0000
347 N A 0.0000
348 F A -0.5689
349 D A -0.8665
350 N A 0.0000
351 C A 0.0000
352 R A -3.3574
353 K A -3.1871
354 R A -2.0696
355 P A 0.0000
356 V A 1.9047
357 F A 2.1586
358 S A 0.9094
359 A A 0.8777
360 W A 0.1007
361 S A -0.3980
362 G A -1.2345
363 I A -1.0115
364 K A -2.4238
365 S A -1.6581
366 N A -2.5161
367 C A 0.0000
368 D A -2.6891
369 V A -2.3074
370 T A -2.0697
371 R A -3.4868
372 K A -4.0114
373 K A -3.8291
374 C A -3.1990
375 D A -3.6881
376 R A -2.9978
377 A A 0.0000
378 F A -0.6142
379 N A -1.2254
380 S A 0.0000
381 I A 0.4249
382 V A 0.0000
383 S A 0.0000
384 T A 0.0000
385 R A -1.3487
386 Y A 0.0000
387 I A -0.2478
388 I A 0.0000
389 C A 0.0000
390 G A -0.5369
391 T A -0.3167
392 P A 0.0000
393 D A 0.0000
394 L A 0.1701
395 F A 0.0000
396 V A 0.1643
397 I A 0.0000
398 R A 0.0000
399 K A -0.7700
400 A A 0.0000
401 T A -0.7513
402 T A 0.0000
403 E A -0.7662
404 N A 0.0000
405 I A 1.0537
406 I A 0.7786
407 S A 0.1796
408 L A 0.1351
409 S A 0.0000
410 P A -0.1489
411 T A -0.1930
412 G A -0.5138
413 F A -0.8764
414 N A -1.6183
415 T A 0.0000
416 P A -0.9954
417 E A -1.2757
418 K A -0.6483
419 L A 0.0168
420 T A 0.1396
421 S A 0.4548
422 F A 0.0000
423 S A 0.2050
424 T A 0.0000
425 V A 0.0000
426 T A -0.6320
427 L A 0.0000
428 E A -0.7767
429 L A 0.0000
430 R A 0.0000
431 T A 0.0000
432 I A 0.0000
433 L A 0.0000
434 S A -0.5203
435 T A -0.5054
436 V A -0.6682
437 S A -0.7494
438 H A -1.2835
439 Q A -1.9259
440 I A 0.0000
441 P A -1.8463
442 K A -2.4623
443 P A 0.0000
444 K A -2.5507
445 T A -2.1086
446 P A -1.9019
447 K A -1.8877
448 T A -0.6533
449 V A -0.2752
450 G A -0.6991
451 N A -0.8714
452 L A 0.0000
453 F A -0.1854
454 M A 0.5951
455 E A 0.1582
456 Y A 0.6386
457 P A -1.2612
458 E A -2.7191
459 H A -2.4019
460 E A -2.6469
461 S A -1.1411
462 F A 0.2743
463 N A -1.2061
464 S A -1.0463
465 E A -2.3355
466 S A -1.5594
467 I A -1.2551
468 S A -1.5440
469 E A -2.7314
470 Q A -2.3315
471 W A -1.3374
472 T A -1.3334
473 K A -2.0394
474 G A -0.6208
475 S A 0.7779
476 I A 2.4270
477 I A 2.6841
478 S A 1.0030
479 P A 0.3024
480 T A -0.0168
481 N A -0.5509
482 I A 1.3976
483 S A 0.5243
484 G A 0.6584
485 F A 1.9485
486 T A 0.6656
487 G A 0.2546
488 F A 0.7228
489 K A -1.0125
490 S A -0.7650
491 L A -0.0039
492 S A -0.2744
493 G A -0.1654
494 F A 0.7491
495 Y A 1.3517
496 P A 0.6508
497 I A 0.8931
498 H A 0.3072
499 P A -0.0489
500 M A -0.0319
501 P A -0.4348
502 T A -0.9403
503 M A 0.0000
504 D A -1.8248
505 T A -0.9705
506 A A -0.4981
507 P A -0.2002
508 T A 0.2848
509 L A 0.6594
510 L A 0.9458
511 Y A 0.6660
512 P A 0.2563
513 I A 0.4486
514 S A -0.2345
515 L A 0.0000
516 S A -0.8183
517 K A -1.3153
518 P A -1.2862
519 E A -1.2840
520 L A 0.0000
521 I A -1.7984
522 R A -2.2587
523 D A 0.0000
524 V A 0.0000
525 Q A -1.6460
526 E A -1.3308
527 M A 0.0000
528 M A 0.0000
529 S A -1.4322
530 K A -1.1273
531 I A 0.0000
532 V A 0.0000
533 R A -2.5596
534 E A -1.5821
535 T A 0.0000
536 Y A -1.5483
537 E A -2.3662
538 V A -1.5721
539 P A -1.8063
540 E A -2.7879
541 S A -1.7994
542 C A -1.0849
543 S A -1.1866
544 S A -0.9008
545 S A -0.7556
546 S A -0.3043
547 D A 0.0000
548 L A 0.1901
549 A A 0.0000
550 G A 0.0000
551 Y A 0.0000
552 I A 0.5057
553 V A 0.4642
554 S A 0.0000
555 I A 0.0000
556 A A 0.0000
557 E A 0.0000
558 A A 0.0000
559 L A 0.0000
560 R A -0.5731
561 P A 0.0000
562 L A 0.0000
563 S A -1.0714
564 L A -1.1617
565 T A -1.3836
566 E A -1.6754
567 L A 0.0000
568 K A -2.3039
569 E A -2.8516
570 L A 0.0000
571 D A -1.9100
572 T A -2.2262
573 E A -2.7914
574 V A 0.0000
575 H A -1.7861
576 R A -2.4322
577 F A -1.8206
578 M A 0.0000
579 E A -1.9239
580 V A -0.4169
581 R A -2.4484
582 D A -3.1614
583 K A -3.2023
584 E A -2.8682
585 A A 0.0000
586 I A -0.7931
587 L A 0.9664
588 T A 0.4652
589 S A 0.0000
590 Q A 0.2179
591 Y A 0.4342
592 L A 0.3770
593 F A 0.0000
594 Y A 0.0000
595 D A -0.5222
596 I A 0.0000
597 L A 0.0000
598 A A 0.0000
599 M A -0.1026
600 V A 0.0000
601 G A 0.0000
602 T A 0.0000
603 N A 0.0000
604 P A 0.0000
605 S A 0.0000
606 I A 0.0000
607 S A 0.0000
608 Y A 0.0000
609 I A 0.0000
610 K A -1.4858
611 Q A -2.1965
612 L A 0.0000
613 I A 0.0000
614 G A -2.0687
615 S A -2.1377
616 D A -2.8856
617 K A -2.7421
618 I A 0.0000
619 P A -0.9017
620 I A -0.7011
621 Q A -1.0888
622 Y A -0.6226
623 A A 0.0000
624 P A -1.4098
625 D A -2.2594
626 V A 0.0000
627 L A 0.0000
628 E A -2.8731
629 S A -2.0551
630 A A 0.0000
631 L A 0.0000
632 R A -2.6821
633 N A -1.6097
634 I A 0.0000
635 K A -1.6393
636 T A 0.0000
637 P A 0.0000
638 T A 0.0000
639 P A -1.2287
640 E A -2.0301
641 L A 0.0000
642 F A 0.0000
643 N A -1.7607
644 L A -0.9030
645 V A 0.0000
646 F A 0.0000
647 T A -0.9361
648 M A 0.0000
649 V A 0.0000
650 K A -2.1134
651 T A -1.4455
652 L A 0.0000
653 K A -1.9529
654 A A -1.1884
655 K A -1.3038
656 S A 0.0000
657 P A -1.0245
658 Q A -1.0984
659 L A 0.0000
660 Y A 0.0000
661 Y A 0.0386
662 V A 0.0000
663 S A 0.0000
664 T A 0.0000
665 V A -0.1586
666 S A -0.9929
667 F A 0.0000
668 S A 0.0000
669 D A -0.8964
670 L A 0.0000
671 L A 0.0000
672 H A 0.0000
673 R A -0.8179
674 A A 0.0000
675 C A 0.0000
676 I A 0.0000
677 N A -0.6742
678 P A 0.0352
679 S A -0.1312
680 S A 0.0000
681 M A 0.0000
682 V A 0.0346
683 A A -0.1980
684 Q A -0.5878
685 F A 0.0000
686 P A -0.4764
687 V A 0.0000
688 H A -0.0382
689 V A 0.0000
690 Y A 0.2896
691 G A 0.0000
692 N A -0.5002
693 F A 0.0000
694 C A 0.0000
695 N A -1.6660
696 P A -1.3573
697 E A -2.1523
698 T A -1.6681
699 P A -1.7474
700 F A 0.0000
701 I A 0.0000
702 K A -2.2303
703 D A -2.8617
704 Q A -2.3391
705 Y A 0.0000
706 I A 0.0000
707 T A -1.2240
708 F A -0.8550
709 L A 0.0000
710 E A -0.9865
711 S A -0.8768
712 Q A -0.9401
713 I A 0.0000
714 Q A -1.7798
715 G A -1.4835
716 G A -1.4589
717 S A -1.4287
718 Q A -1.7249
719 G A -1.4608
720 S A -1.1033
721 K A -1.2743
722 S A -0.8457
723 E A -0.6103
724 K A 0.0000
725 V A 0.1516
726 V A 0.0000
727 L A 0.0000
728 I A 0.0000
729 N A -0.0598
730 A A 0.0000
731 L A 0.0000
732 G A 0.0000
733 K A -0.9144
734 L A 0.0000
735 G A 0.0000
736 H A 0.0000
737 Y A -0.2747
738 K A -0.7652
739 A A 0.0000
740 V A 0.0000
741 S A -0.5315
742 T A 0.0000
743 L A 0.0000
744 V A -0.6950
745 K A -1.5788
746 F A 0.0000
747 I A 0.0000
748 Q A -2.1327
749 G A 0.0000
750 K A -2.4371
751 V A -1.6810
752 S A -1.7664
753 Q A -2.1446
754 E A -1.4564
755 P A -1.2153
756 M A -0.4717
757 I A 0.0000
758 R A -1.1601
759 S A -0.3142
760 L A 0.4494
761 A A 0.0000
762 V A 0.0000
763 Y A 0.4972
764 A A -0.0588
765 L A 0.0000
766 K A -0.4752
767 R A -0.6106
768 T A 0.0000
769 A A 0.0000
770 M A 0.0133
771 Q A -0.1981
772 Y A -0.0505
773 P A -0.2514
774 A A -0.3633
775 K A -0.8104
776 V A 0.0000
777 K A -0.3700
778 P A -0.4003
779 I A -0.0433
780 L A 0.0000
781 M A -0.5464
782 S A -0.6204
783 I A 0.0000
784 I A 0.0000
785 N A -1.5074
786 N A -1.9454
787 P A -1.2841
788 G A -1.3285
789 E A -1.6665
790 H A -1.5299
791 P A -1.8642
792 E A -2.0576
793 V A 0.0000
794 R A 0.0000
795 I A -0.5546
796 A A 0.0000
797 A A 0.0000
798 V A 0.0000
799 S A 0.1792
800 V A 0.0000
801 L A 0.0000
802 P A 0.0000
803 F A 0.0068
804 S A 0.0000
805 S A -0.3385
806 P A 0.0000
807 S A -0.6360
808 T A -1.0258
809 T A -1.0651
810 E A -1.1727
811 L A 0.0000
812 Q A -1.6784
813 K A -2.1090
814 I A 0.0000
815 A A 0.0000
816 L A 0.0337
817 R A -0.0634
818 T A 0.0000
819 W A 1.1175
820 F A 1.9810
821 E A -0.0200
822 P A -0.5089
823 S A -1.3299
824 K A -2.4062
825 Q A -2.2157
826 V A 0.0000
827 T A 0.0000
828 S A -1.1156
829 F A -0.1937
830 I A 0.0000
831 Y A -0.4214
832 S A -0.5971
833 T A -0.4830
834 L A 0.0000
835 K A -1.7516
836 S A -1.5117
837 L A 0.0000
838 R A -3.1065
839 T A -1.5754
840 T A 0.0000
841 Q A -1.5060
842 V A -0.8319
843 P A -0.7678
844 E A -1.2752
845 L A 0.0000
846 M A -1.6739
847 Q A -2.2527
848 F A 0.0000
849 R A -3.2149
850 N A -3.2131
851 K A -2.6545
852 V A 0.0000
853 K A -3.1471
854 S A -1.8494
855 V A 0.0000
856 I A -1.1797
857 P A -0.8039
858 M A -0.6390
859 V A 0.0000
860 R A -1.3120
861 R A -2.5049
862 T A -1.9267
863 H A -2.0191
864 S A -1.4422
865 G A -1.0183
866 I A -0.1294
867 Q A -0.5730
868 F A 0.8098
869 G A -0.2215
870 G A -0.2957
871 S A -0.4228
872 G A -0.3088
873 V A 0.9726
874 E A -0.0970
875 M A 1.0221
876 V A 0.8574
877 S A -0.9246
878 K A -2.5867
879 G A -2.3975
880 E A -3.5482
881 E A -4.0014
882 D A -3.4903
883 N A -2.1402
884 M A -1.7229
885 A A -1.4203
886 I A -0.5766
887 I A 0.0000
888 K A -2.2697
889 E A -2.3246
890 F A -1.1482
891 M A 0.0000
892 R A -3.2065
893 F A 0.0000
894 K A -3.3888
895 V A 0.0000
896 H A -2.5068
897 M A 0.0000
898 E A -3.2034
899 G A 0.0000
900 S A -2.5210
901 V A 0.0000
902 N A -1.6924
903 G A -1.7614
904 H A -1.9179
905 E A -3.1579
906 F A 0.0000
907 E A -2.8828
908 I A 0.0000
909 E A -3.0818
910 G A 0.0000
911 E A -3.7016
912 G A 0.0000
913 E A -2.4964
914 G A 0.0000
915 R A -2.5113
916 P A 0.0000
917 Y A -1.5257
918 E A -2.4457
919 G A 0.0000
920 T A -1.1087
921 Q A 0.0000
922 T A -1.3017
923 A A 0.0000
924 K A -2.3556
925 L A 0.0000
926 K A -2.0617
927 V A 0.0000
928 T A -1.8506
929 K A -2.9290
930 G A -1.9880
931 G A -1.6256
932 P A -1.0866
933 L A 0.0000
934 P A -0.7376
935 F A 0.0000
936 A A 0.0000
937 W A 0.0000
938 D A 0.0000
939 I A 0.0000
940 L A 0.0000
941 S A 0.0000
942 P A 0.0000
943 Q A 0.0000
944 F A 0.0000
945 M A 0.0000
946 Y A 0.0000
947 G A 0.0000
948 S A 0.0000
949 K A 0.0000
950 A A 0.0000
951 Y A 0.0000
952 V A 0.0000
953 K A -1.6045
954 H A -1.1543
955 P A -0.9180
956 A A -1.0003
957 D A -1.9150
958 I A 0.0000
959 P A -1.0291
960 D A -0.7237
961 Y A 0.0000
962 L A 0.0000
963 K A 0.0000
964 L A -0.8823
965 S A 0.0000
966 F A 0.0000
967 P A -0.8845
968 E A -1.6242
969 G A 0.0000
970 F A 0.0000
971 K A -1.9861
972 W A 0.0000
973 E A -2.2868
974 R A 0.0000
975 V A -0.7187
976 M A 0.0000
977 N A -1.4873
978 F A 0.0000
979 E A -2.6300
980 D A -1.9319
981 G A -1.3018
982 G A 0.0000
983 V A -0.7624
984 V A 0.0000
985 T A -1.1090
986 V A 0.0000
987 T A -2.0559
988 Q A 0.0000
989 D A -2.3246
990 S A 0.0000
991 S A -1.2507
992 L A -1.2738
993 Q A -2.5464
994 D A -2.6901
995 G A -2.3564
996 E A -2.6867
997 F A 0.0000
998 I A -1.8919
999 Y A 0.0000
1000 K A -2.8524
1001 V A 0.0000
1002 K A -3.2697
1003 L A 0.0000
1004 R A -2.7450
1005 G A 0.0000
1006 T A -0.9948
1007 N A -0.8353
1008 F A 0.0000
1009 P A -1.2107
1010 S A -1.3748
1011 D A -2.2237
1012 G A -1.6034
1013 P A -1.5613
1014 V A 0.0000
1015 M A -1.2904
1016 Q A -1.9972
1017 K A -1.9578
1018 K A -2.1279
1019 T A -1.2113
1020 M A -0.2244
1021 G A -0.3997
1022 W A 0.0000
1023 E A -0.8416
1024 A A -0.5919
1025 S A 0.0000
1026 S A 0.0000
1027 E A 0.0000
1028 R A -0.7254
1029 M A 0.0000
1030 Y A 0.0000
1031 P A -0.9933
1032 E A -1.5077
1033 D A -2.1217
1034 G A -0.9859
1035 A A 0.0000
1036 L A 0.0000
1037 K A -1.3032
1038 G A 0.0000
1039 E A -1.1989
1040 I A 0.0000
1041 K A -1.4080
1042 Q A 0.0000
1043 R A -1.1136
1044 L A 0.0000
1045 K A -1.4726
1046 L A -1.9346
1047 K A -2.9524
1048 D A -3.0028
1049 G A -2.1832
1050 G A -1.6928
1051 H A -1.3375
1052 Y A 0.0000
1053 D A -1.7605
1054 A A 0.0000
1055 E A -2.4883
1056 V A 0.0000
1057 K A -1.7853
1058 T A 0.0000
1059 T A -1.3725
1060 Y A 0.0000
1061 K A -1.3869
1062 A A 0.0000
1063 K A -1.2788
1064 K A -0.8594
1065 P A -0.3530
1066 V A -0.3525
1067 Q A -0.5761
1068 L A -0.5577
1069 P A 0.0000
1070 G A -0.6659
1071 A A -0.4599
1072 Y A 0.0000
1073 N A -0.5231
1074 V A 0.0000
1075 N A 0.0000
1076 I A 0.0000
1077 K A -0.7298
1078 L A 0.0000
1079 D A -1.6897
1080 I A -0.5376
1081 T A -0.7463
1082 S A -1.0053
1083 H A -1.5029
1084 N A -1.6242
1085 E A -2.4418
1086 D A -1.8946
1087 Y A -0.9528
1088 T A -0.9404
1089 I A -0.8265
1090 V A 0.0000
1091 E A -1.5035
1092 Q A 0.0000
1093 Y A -0.5018
1094 E A 0.0000
1095 R A -1.1783
1096 A A 0.0000
1097 E A -1.0945
1098 G A 0.0000
1099 R A 0.0000
1100 H A -1.0292
1101 S A -0.5802
1102 T A -0.2573
1103 G A -0.8650
1104 G A -1.0771
1105 M A -1.0525
1106 D A -2.4028
1107 E A -2.7260
1108 L A 0.0000
1109 Y A -0.7049
1110 K A -2.3899
1111 G A -1.6198
1112 G A -0.8389
1113 S A -0.7260
1114 G A -0.8929
1115 V A 0.0894
1116 E A -2.0683
1117 H A -2.3791
1118 H A -2.7322
1119 H A -2.9671
1120 H A -2.7137
1121 H A -2.4015
1122 H A -1.9245
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Calculations for various pH values

This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.

pH
Average A4D Score
Max A4D Score
4.0 -0.7733 5.4165 View CSV PDB
4.5 -0.8354 5.3955 View CSV PDB
5.0 -0.9126 5.3733 View CSV PDB
5.5 -0.9877 5.3532 View CSV PDB
6.0 -1.0424 5.3386 View CSV PDB
6.5 -1.0638 5.3308 View CSV PDB
7.0 -1.0523 5.3276 View CSV PDB
7.5 -1.0198 5.3265 View CSV PDB
8.0 -0.9771 5.3262 View CSV PDB
8.5 -0.9284 5.3261 View CSV PDB
9.0 -0.8745 5.326 View CSV PDB