| Chain sequence(s) |
A: LNGTLMQYFEWYMPNDGQHWKRLQNDSAYLAEHGITAVWIPPAYKGTSQADVGYGAYDLYDLGEFHQKGTVRTKYGTKGELQSAIKSLHSRDINVYGDVVINHKGGADATEDVTAVEVDPADRNRVISGEHLIKAWTHFHFPGRGSTYSDFKWHWYHFDGTDWDESRKLNRIYKFQGKAWDWEVSNEFGNYDYLMYADIDYDHPDVAAEIKRWGTWYANELQLDGFRLDAVKHIKFSFLRDWVNHVREKTGKEMFTVAEYWSYDLGALENYLNKTNFNHSVFDVPLHYQFHAASTQGGGYDMRKLLNGTVVSKHPLKSVTFVDNHDTQPGQSLESTVQTWFKPLAYAFILTRESGYPQVFYGDMYGTKGDSQREIPALKHKIEPILKARKQYAYGAQHDYFDHHDIVGWTREGDSSVANSGLAALITDGPGGAKRMYVGRQNAGETWHDITGNRSEPVVINSAGWGEFHVNGGSVSIYVQR
input PDB |
| Selected Chain(s) | A |
| Distance of aggregation | 10 Å |
| FoldX usage | Yes |
| pH calculations | Yes |
| alphaCutter usage | No |
| Dynamic mode | No |
| Automated mutations | No |
| Downloads | Download all the data |
| Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:13)
[WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow
to prevent this behavior) (00:00:13)
[INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:13)
[INFO] runJob: Creating pdb object from: input.pdb (00:00:13)
[INFO] PDB-Info: The input structure is globular. Max score is recommended for pH analysis. (00:00:14)
[INFO] FoldX: Starting FoldX energy minimization (00:00:14)
[INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:05:25)
[INFO] agg3D: Running pKa-ANI on
/STORAGE/DATA/lcbio/aggreskan/d692f1d3036e706/tmp/folded.pdb (00:05:25)
[INFO] Main: Simulation completed successfully. (00:08:43)
|
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
| residue index | residue name | chain | Aggrescan4D score | mutation |
|---|---|---|---|---|
| 3 | L | A | 1.3087 | |
| 4 | N | A | -0.0088 | |
| 5 | G | A | 0.1763 | |
| 6 | T | A | 0.0000 | |
| 7 | L | A | 0.0000 | |
| 8 | M | A | 0.0000 | |
| 9 | Q | A | 0.0000 | |
| 10 | Y | A | 0.0000 | |
| 11 | F | A | 0.0000 | |
| 12 | E | A | 0.0000 | |
| 13 | W | A | 0.1303 | |
| 14 | Y | A | -0.3080 | |
| 15 | M | A | -0.7122 | |
| 16 | P | A | -1.1292 | |
| 17 | N | A | -1.6663 | |
| 18 | D | A | -2.2665 | |
| 19 | G | A | 0.0000 | |
| 20 | Q | A | -1.9584 | |
| 21 | H | A | 0.0000 | |
| 22 | W | A | 0.0000 | |
| 23 | K | A | -2.4920 | |
| 24 | R | A | -2.1466 | |
| 25 | L | A | 0.0000 | |
| 26 | Q | A | -2.7114 | |
| 27 | N | A | -2.1832 | |
| 28 | D | A | 0.0000 | |
| 29 | S | A | 0.0000 | |
| 30 | A | A | -1.3628 | |
| 31 | Y | A | -0.7609 | |
| 32 | L | A | 0.0000 | |
| 33 | A | A | -1.6281 | |
| 34 | E | A | -2.1772 | |
| 35 | H | A | 0.0000 | |
| 36 | G | A | -1.0837 | |
| 37 | I | A | 0.0000 | |
| 38 | T | A | -0.6013 | |
| 39 | A | A | 0.0000 | |
| 40 | V | A | 0.0000 | |
| 41 | W | A | 0.0000 | |
| 42 | I | A | 0.0000 | |
| 43 | P | A | 0.0000 | |
| 44 | P | A | 0.0000 | |
| 45 | A | A | 0.0000 | |
| 46 | Y | A | 0.0000 | |
| 47 | K | A | 0.0000 | |
| 48 | G | A | 0.0000 | |
| 49 | T | A | -0.4178 | |
| 50 | S | A | -0.6237 | |
| 51 | Q | A | -0.8030 | |
| 52 | A | A | -0.4669 | |
| 53 | D | A | -0.3246 | |
| 54 | V | A | 0.1577 | |
| 55 | G | A | 0.0000 | |
| 56 | Y | A | 0.1828 | |
| 57 | G | A | 0.0000 | |
| 58 | A | A | 0.0000 | |
| 59 | Y | A | 0.0000 | |
| 60 | D | A | 0.0000 | |
| 61 | L | A | 0.2084 | |
| 62 | Y | A | 0.3932 | |
| 63 | D | A | 0.0000 | |
| 64 | L | A | 0.0000 | |
| 65 | G | A | 0.0000 | |
| 66 | E | A | -0.7053 | |
| 67 | F | A | -0.4322 | |
| 68 | H | A | -0.9787 | |
| 69 | Q | A | 0.0000 | |
| 70 | K | A | -1.0650 | |
| 71 | G | A | -0.9203 | |
| 72 | T | A | 0.0000 | |
| 73 | V | A | -0.1467 | |
| 74 | R | A | -0.5105 | |
| 75 | T | A | 0.0000 | |
| 76 | K | A | 0.0000 | |
| 77 | Y | A | 0.0000 | |
| 78 | G | A | 0.0000 | |
| 79 | T | A | -0.6628 | |
| 80 | K | A | 0.0000 | |
| 81 | G | A | -0.9375 | |
| 82 | E | A | -1.3667 | |
| 83 | L | A | 0.0000 | |
| 84 | Q | A | -1.4457 | |
| 85 | S | A | -1.5886 | |
| 86 | A | A | 0.0000 | |
| 87 | I | A | 0.0000 | |
| 88 | K | A | -2.7055 | |
| 89 | S | A | -2.2292 | |
| 90 | L | A | 0.0000 | |
| 91 | H | A | -2.4341 | |
| 92 | S | A | -2.1716 | |
| 93 | R | A | -3.2209 | |
| 94 | D | A | -3.0506 | |
| 95 | I | A | 0.0000 | |
| 96 | N | A | -1.5878 | |
| 97 | V | A | 0.0000 | |
| 98 | Y | A | 0.0000 | |
| 99 | G | A | 0.0000 | |
| 100 | D | A | 0.0000 | |
| 101 | V | A | 0.0000 | |
| 102 | V | A | 0.0000 | |
| 103 | I | A | 0.0000 | |
| 104 | N | A | -0.5624 | |
| 105 | H | A | -0.0351 | |
| 106 | K | A | 0.0000 | |
| 107 | G | A | 0.0000 | |
| 108 | G | A | -0.1554 | |
| 109 | A | A | -0.3046 | |
| 110 | D | A | -0.7381 | |
| 111 | A | A | -0.3705 | |
| 112 | T | A | -0.5640 | |
| 113 | E | A | -1.1808 | |
| 114 | D | A | -1.7266 | |
| 115 | V | A | 0.0000 | |
| 116 | T | A | -0.8603 | |
| 117 | A | A | 0.0000 | |
| 118 | V | A | -0.4761 | |
| 119 | E | A | -0.3954 | |
| 120 | V | A | 0.0000 | |
| 121 | D | A | -0.3574 | |
| 122 | P | A | -0.2142 | |
| 123 | A | A | -0.3404 | |
| 124 | D | A | -0.3182 | |
| 125 | R | A | 0.0000 | |
| 126 | N | A | -0.4984 | |
| 127 | R | A | -0.7963 | |
| 128 | V | A | 1.1945 | |
| 129 | I | A | 2.0169 | |
| 130 | S | A | 0.4165 | |
| 131 | G | A | -0.5724 | |
| 132 | E | A | -2.0570 | |
| 133 | H | A | -1.1695 | |
| 134 | L | A | 0.1060 | |
| 135 | I | A | 0.0000 | |
| 136 | K | A | -1.4138 | |
| 137 | A | A | 0.0000 | |
| 138 | W | A | 0.2245 | |
| 139 | T | A | 0.0000 | |
| 140 | H | A | -0.5190 | |
| 141 | F | A | 0.0000 | |
| 142 | H | A | -1.5787 | |
| 143 | F | A | 0.0000 | |
| 144 | P | A | -0.9108 | |
| 145 | G | A | -0.7611 | |
| 146 | R | A | 0.0000 | |
| 147 | G | A | -0.7971 | |
| 148 | S | A | -0.9914 | |
| 149 | T | A | -0.1301 | |
| 150 | Y | A | 0.5718 | |
| 151 | S | A | -0.4607 | |
| 152 | D | A | -1.8010 | |
| 153 | F | A | -0.8536 | |
| 154 | K | A | -1.1473 | |
| 155 | W | A | 0.0000 | |
| 156 | H | A | 0.1206 | |
| 157 | W | A | 0.5141 | |
| 158 | Y | A | 1.0408 | |
| 159 | H | A | 0.0000 | |
| 160 | F | A | 0.0000 | |
| 161 | D | A | -0.4869 | |
| 162 | G | A | 0.0000 | |
| 163 | T | A | 0.0849 | |
| 164 | D | A | -0.0568 | |
| 165 | W | A | -0.8614 | |
| 166 | D | A | 0.0000 | |
| 167 | E | A | -1.8120 | |
| 168 | S | A | -1.6645 | |
| 169 | R | A | -2.4688 | |
| 170 | K | A | -2.7656 | |
| 171 | L | A | -1.7702 | |
| 172 | N | A | -2.1045 | |
| 173 | R | A | -2.0026 | |
| 174 | I | A | 0.0000 | |
| 175 | Y | A | 0.0000 | |
| 176 | K | A | -0.9382 | |
| 177 | F | A | 0.0000 | |
| 178 | Q | A | -1.4284 | |
| 179 | G | A | -1.4235 | |
| 180 | K | A | -1.4863 | |
| 181 | A | A | -0.9048 | |
| 182 | W | A | -0.4210 | |
| 183 | D | A | -1.1055 | |
| 184 | W | A | -0.0196 | |
| 185 | E | A | -0.8422 | |
| 186 | V | A | 0.7019 | |
| 187 | S | A | -0.1250 | |
| 188 | N | A | -0.8103 | |
| 189 | E | A | -0.4148 | |
| 190 | F | A | 0.8183 | |
| 191 | G | A | 0.0000 | |
| 192 | N | A | -0.1495 | |
| 193 | Y | A | 0.4747 | |
| 194 | D | A | -0.7139 | |
| 195 | Y | A | 0.4848 | |
| 196 | L | A | 1.6236 | |
| 197 | M | A | 1.5153 | |
| 198 | Y | A | 1.2195 | |
| 199 | A | A | 0.5293 | |
| 200 | D | A | -0.1511 | |
| 201 | I | A | -0.2229 | |
| 202 | D | A | -0.7091 | |
| 203 | Y | A | -1.4754 | |
| 204 | D | A | -2.3762 | |
| 205 | H | A | -1.5442 | |
| 206 | P | A | -1.7497 | |
| 207 | D | A | -2.2142 | |
| 208 | V | A | 0.0000 | |
| 209 | A | A | -1.3823 | |
| 210 | A | A | -1.3036 | |
| 211 | E | A | 0.0000 | |
| 212 | I | A | 0.0000 | |
| 213 | K | A | -1.7270 | |
| 214 | R | A | -2.2168 | |
| 215 | W | A | 0.0000 | |
| 216 | G | A | 0.0000 | |
| 217 | T | A | -1.9440 | |
| 218 | W | A | -1.0386 | |
| 219 | Y | A | 0.0000 | |
| 220 | A | A | 0.0000 | |
| 221 | N | A | -2.3077 | |
| 222 | E | A | -1.4539 | |
| 223 | L | A | 0.0000 | |
| 224 | Q | A | -2.2995 | |
| 225 | L | A | 0.0000 | |
| 226 | D | A | -1.5869 | |
| 227 | G | A | 0.0000 | |
| 228 | F | A | 0.0000 | |
| 229 | R | A | 0.0000 | |
| 230 | L | A | 0.0000 | |
| 231 | D | A | -0.7559 | |
| 232 | A | A | -0.6249 | |
| 233 | V | A | 0.0000 | |
| 234 | K | A | -1.3761 | |
| 235 | H | A | -1.5967 | |
| 236 | I | A | 0.0000 | |
| 237 | K | A | -1.6904 | |
| 238 | F | A | -0.6251 | |
| 239 | S | A | -0.9304 | |
| 240 | F | A | -1.2536 | |
| 241 | L | A | -1.3403 | |
| 242 | R | A | -2.9188 | |
| 243 | D | A | -2.7695 | |
| 244 | W | A | 0.0000 | |
| 245 | V | A | 0.0000 | |
| 246 | N | A | -2.9460 | |
| 247 | H | A | -2.9136 | |
| 248 | V | A | 0.0000 | |
| 249 | R | A | -3.2992 | |
| 250 | E | A | -3.6889 | |
| 251 | K | A | -3.4996 | |
| 252 | T | A | -2.7404 | |
| 253 | G | A | -2.7332 | |
| 254 | K | A | -3.0849 | |
| 255 | E | A | -2.7659 | |
| 256 | M | A | 0.0000 | |
| 257 | F | A | -0.3382 | |
| 258 | T | A | 0.0000 | |
| 259 | V | A | 0.0000 | |
| 260 | A | A | 0.0000 | |
| 261 | E | A | -0.1471 | |
| 262 | Y | A | 0.4611 | |
| 263 | W | A | 1.0796 | |
| 264 | S | A | 0.7139 | |
| 265 | Y | A | 0.8120 | |
| 266 | D | A | -1.0679 | |
| 267 | L | A | -1.0247 | |
| 268 | G | A | -1.1308 | |
| 269 | A | A | -0.8681 | |
| 270 | L | A | 0.0000 | |
| 271 | E | A | -2.1983 | |
| 272 | N | A | -2.4118 | |
| 273 | Y | A | 0.0000 | |
| 274 | L | A | 0.0000 | |
| 275 | N | A | -2.4370 | |
| 276 | K | A | -2.5934 | |
| 277 | T | A | -1.8003 | |
| 278 | N | A | -2.0628 | |
| 279 | F | A | -0.8922 | |
| 280 | N | A | -1.2707 | |
| 281 | H | A | 0.0000 | |
| 282 | S | A | 0.1557 | |
| 283 | V | A | 0.1631 | |
| 284 | F | A | 0.0000 | |
| 285 | D | A | 0.0000 | |
| 286 | V | A | 0.4851 | |
| 287 | P | A | 0.0000 | |
| 288 | L | A | 0.0000 | |
| 289 | H | A | 0.0000 | |
| 290 | Y | A | 0.1617 | |
| 291 | Q | A | -0.5373 | |
| 292 | F | A | 0.0000 | |
| 293 | H | A | -0.5901 | |
| 294 | A | A | -0.5687 | |
| 295 | A | A | 0.0000 | |
| 296 | S | A | 0.0000 | |
| 297 | T | A | -0.9871 | |
| 298 | Q | A | -1.5302 | |
| 299 | G | A | -1.2998 | |
| 300 | G | A | -1.0377 | |
| 301 | G | A | -1.0536 | |
| 302 | Y | A | -0.9205 | |
| 303 | D | A | -1.3579 | |
| 304 | M | A | 0.0000 | |
| 305 | R | A | -2.3678 | |
| 306 | K | A | -1.8230 | |
| 307 | L | A | 0.0000 | |
| 308 | L | A | -1.0540 | |
| 309 | N | A | -1.9951 | |
| 310 | G | A | -1.4720 | |
| 311 | T | A | 0.0000 | |
| 312 | V | A | 0.0000 | |
| 313 | V | A | -0.3769 | |
| 314 | S | A | -1.0057 | |
| 315 | K | A | -1.9145 | |
| 316 | H | A | -0.6825 | |
| 317 | P | A | -0.2547 | |
| 318 | L | A | 0.8353 | |
| 319 | K | A | 0.1220 | |
| 320 | S | A | 0.0000 | |
| 321 | V | A | 0.0000 | |
| 322 | T | A | 0.0000 | |
| 323 | F | A | 0.0000 | |
| 324 | V | A | 0.0000 | |
| 325 | D | A | 0.0000 | |
| 326 | N | A | 0.0000 | |
| 327 | H | A | 0.0000 | |
| 328 | D | A | -0.8314 | |
| 329 | T | A | 0.0000 | |
| 330 | Q | A | 0.0000 | |
| 331 | P | A | 0.0000 | |
| 332 | G | A | -1.5298 | |
| 333 | Q | A | -0.8271 | |
| 334 | S | A | -0.6105 | |
| 335 | L | A | -0.4484 | |
| 336 | E | A | -1.0593 | |
| 337 | S | A | 0.0000 | |
| 338 | T | A | -0.5380 | |
| 339 | V | A | 0.0000 | |
| 340 | Q | A | -0.6678 | |
| 341 | T | A | -0.1966 | |
| 342 | W | A | 0.2009 | |
| 343 | F | A | 0.0000 | |
| 344 | K | A | 0.0000 | |
| 345 | P | A | 0.0000 | |
| 346 | L | A | 0.0000 | |
| 347 | A | A | 0.0000 | |
| 348 | Y | A | 0.0000 | |
| 349 | A | A | 0.0000 | |
| 350 | F | A | 0.0000 | |
| 351 | I | A | 0.0000 | |
| 352 | L | A | 0.0000 | |
| 353 | T | A | 0.0000 | |
| 354 | R | A | -1.3504 | |
| 355 | E | A | -1.8368 | |
| 356 | S | A | -0.7056 | |
| 357 | G | A | -0.0972 | |
| 358 | Y | A | 0.0195 | |
| 359 | P | A | 0.0000 | |
| 360 | Q | A | 0.0000 | |
| 361 | V | A | 0.0000 | |
| 362 | F | A | 0.0000 | |
| 363 | Y | A | 0.0000 | |
| 364 | G | A | 0.0000 | |
| 365 | D | A | 0.0000 | |
| 366 | M | A | 0.0000 | |
| 367 | Y | A | 0.1450 | |
| 368 | G | A | 0.0000 | |
| 369 | T | A | 0.0000 | |
| 370 | K | A | -1.3907 | |
| 371 | G | A | -1.9187 | |
| 372 | D | A | -2.6745 | |
| 373 | S | A | -2.3939 | |
| 374 | Q | A | -2.5309 | |
| 375 | R | A | -2.7181 | |
| 376 | E | A | -2.1728 | |
| 377 | I | A | 0.0000 | |
| 378 | P | A | -0.6586 | |
| 379 | A | A | -0.4273 | |
| 380 | L | A | 0.0000 | |
| 381 | K | A | -1.6187 | |
| 382 | H | A | -2.1087 | |
| 383 | K | A | -2.1110 | |
| 384 | I | A | 0.0000 | |
| 385 | E | A | -2.0868 | |
| 386 | P | A | -1.1999 | |
| 387 | I | A | 0.0000 | |
| 388 | L | A | 0.0000 | |
| 389 | K | A | -1.4248 | |
| 390 | A | A | 0.0000 | |
| 391 | R | A | 0.0000 | |
| 392 | K | A | -1.2878 | |
| 393 | Q | A | -1.1382 | |
| 394 | Y | A | -0.6921 | |
| 395 | A | A | 0.0000 | |
| 396 | Y | A | -0.5228 | |
| 397 | G | A | -0.7294 | |
| 398 | A | A | -0.7133 | |
| 399 | Q | A | -1.1833 | |
| 400 | H | A | -1.0956 | |
| 401 | D | A | -1.8347 | |
| 402 | Y | A | -1.5464 | |
| 403 | F | A | -1.7923 | |
| 404 | D | A | -2.5655 | |
| 405 | H | A | -2.1033 | |
| 406 | H | A | -2.0685 | |
| 407 | D | A | -1.7345 | |
| 408 | I | A | -0.9362 | |
| 409 | V | A | 0.0000 | |
| 410 | G | A | 0.0000 | |
| 411 | W | A | 0.0000 | |
| 412 | T | A | 0.0000 | |
| 413 | R | A | 0.0000 | |
| 414 | E | A | -1.1351 | |
| 415 | G | A | -1.2167 | |
| 416 | D | A | -1.1563 | |
| 417 | S | A | -0.9228 | |
| 418 | S | A | -0.5095 | |
| 419 | V | A | -0.4021 | |
| 420 | A | A | -0.6989 | |
| 421 | N | A | -1.8218 | |
| 422 | S | A | 0.0000 | |
| 423 | G | A | 0.0000 | |
| 424 | L | A | 0.0000 | |
| 425 | A | A | 0.0000 | |
| 426 | A | A | 0.0000 | |
| 427 | L | A | 0.0000 | |
| 428 | I | A | 0.0000 | |
| 429 | T | A | 0.0000 | |
| 430 | D | A | 0.0000 | |
| 431 | G | A | -0.8970 | |
| 432 | P | A | -0.9308 | |
| 433 | G | A | -1.0476 | |
| 434 | G | A | -0.6907 | |
| 435 | A | A | -1.1659 | |
| 436 | K | A | 0.0000 | |
| 437 | R | A | -2.5873 | |
| 438 | M | A | 0.0000 | |
| 439 | Y | A | -0.8277 | |
| 440 | V | A | 0.0000 | |
| 441 | G | A | 0.0000 | |
| 442 | R | A | -2.5966 | |
| 443 | Q | A | -2.6105 | |
| 444 | N | A | 0.0000 | |
| 445 | A | A | -1.4625 | |
| 446 | G | A | -1.1916 | |
| 447 | E | A | -1.1345 | |
| 448 | T | A | -0.5000 | |
| 449 | W | A | 0.0000 | |
| 450 | H | A | -0.9366 | |
| 451 | D | A | 0.0000 | |
| 452 | I | A | -0.1610 | |
| 453 | T | A | -0.7412 | |
| 454 | G | A | -0.8980 | |
| 455 | N | A | -1.2006 | |
| 456 | R | A | -1.6801 | |
| 457 | S | A | -1.5509 | |
| 458 | E | A | -2.2450 | |
| 459 | P | A | -1.1027 | |
| 460 | V | A | -0.3722 | |
| 461 | V | A | 0.7851 | |
| 462 | I | A | 0.0000 | |
| 463 | N | A | -1.1607 | |
| 464 | S | A | -1.1218 | |
| 465 | A | A | -0.8684 | |
| 466 | G | A | 0.0000 | |
| 467 | W | A | -0.7871 | |
| 468 | G | A | 0.0000 | |
| 469 | E | A | -2.4559 | |
| 470 | F | A | 0.0000 | |
| 471 | H | A | -1.5563 | |
| 472 | V | A | 0.0000 | |
| 473 | N | A | -1.1709 | |
| 474 | G | A | -0.9899 | |
| 475 | G | A | -0.5581 | |
| 476 | S | A | -0.4334 | |
| 477 | V | A | 0.0000 | |
| 478 | S | A | 0.0000 | |
| 479 | I | A | 0.0000 | |
| 480 | Y | A | 0.0000 | |
| 481 | V | A | 0.0000 | |
| 482 | Q | A | -1.4430 | |
| 483 | R | A | -2.0750 |
Calculations for various pH values
This page contains details and comparisons for all models calculated at different pH points.
Please find suggestions on interpreting the results below. More details can be found in the Tutorial.
The input structure is globular. Max score is recommended for pH analysis.
pH |
Average A4D Score |
Max A4D Score |
|||
| 4.0 | -0.5015 | 3.8127 | View | CSV | PDB |
| 4.5 | -0.5557 | 3.6579 | View | CSV | PDB |
| 5.0 | -0.6192 | 3.4733 | View | CSV | PDB |
| 5.5 | -0.681 | 3.2791 | View | CSV | PDB |
| 6.0 | -0.7308 | 3.2012 | View | CSV | PDB |
| 6.5 | -0.7631 | 3.1418 | View | CSV | PDB |
| 7.0 | -0.7792 | 3.0974 | View | CSV | PDB |
| 7.5 | -0.7852 | 3.0631 | View | CSV | PDB |
| 8.0 | -0.7847 | 3.0381 | View | CSV | PDB |
| 8.5 | -0.7771 | 3.0275 | View | CSV | PDB |
| 9.0 | -0.7603 | 3.0369 | View | CSV | PDB |
ALA alanine
ARG arginine
ASN asparagine
ASP aspartic acid
CYS cysteine
GLN glutamine
GLU glutamic acid
GLY glycine
HIS histidine
ILE isoleucine
LEU leucine
LYS lysine
MET methionine
PHE phenylalanine
PRO proline
SER serine
THR threonine
TRP tryptophan
TYR tyrosine
VAL valine