Chain sequence(s) |
A: MAEEYKNTVPEQETPKVATEESSAPEIKERGMFDFLKKKEEVKPQETTTLASEFEHKTQISEPESFVAKHEEEEHKPTLLEQLHQKHEEEEENKPSLLDKLHRSNSSSSSSSDEEGEDGEKKKKEKKKKIVEGDHVKTVEEENQGVMDRIKEKFPLGEKPGGDDVPVVTTMPAPHSVEDHKPEEEEKKGFMDKIKEKLPGHSKKPEDSQVVNTTPLVETATPIADIPEEKKGFMDKIKEKLPGYHAKTTGEEEKKEKVSD
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:01) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.3862 | |
2 | A | A | -0.6291 | |
3 | E | A | -2.2402 | |
4 | E | A | -2.5781 | |
5 | Y | A | -1.2770 | |
6 | K | A | -2.2372 | |
7 | N | A | -1.5112 | |
8 | T | A | -0.4707 | |
9 | V | A | 0.3895 | |
10 | P | A | -1.0517 | |
11 | E | A | -2.5985 | |
12 | Q | A | -2.8540 | |
13 | E | A | -3.2878 | |
14 | T | A | -1.8695 | |
15 | P | A | -1.1983 | |
16 | K | A | -1.2194 | |
17 | V | A | 0.5686 | |
18 | A | A | -0.4606 | |
19 | T | A | -1.3265 | |
20 | E | A | -2.5406 | |
21 | E | A | -2.8924 | |
22 | S | A | -1.8099 | |
23 | S | A | -1.5133 | |
24 | A | A | -0.7340 | |
25 | P | A | -0.8728 | |
26 | E | A | -1.8137 | |
27 | I | A | -0.6455 | |
28 | K | A | -2.8474 | |
29 | E | A | -3.3383 | |
30 | R | A | -2.5497 | |
31 | G | A | -1.0754 | |
32 | M | A | 1.2514 | |
33 | F | A | 1.9585 | |
34 | D | A | -0.6239 | |
35 | F | A | 1.2704 | |
36 | L | A | 0.7263 | |
37 | K | A | -2.1879 | |
38 | K | A | -3.3034 | |
39 | K | A | -3.5584 | |
40 | E | A | -4.0086 | |
41 | E | A | -2.9563 | |
42 | V | A | -1.0082 | |
43 | K | A | -2.1371 | |
44 | P | A | -1.8682 | |
45 | Q | A | -2.5362 | |
46 | E | A | -2.7754 | |
47 | T | A | -1.0058 | |
48 | T | A | -0.5326 | |
49 | T | A | -0.0368 | |
50 | L | A | 1.2912 | |
51 | A | A | 0.3324 | |
52 | S | A | -0.6525 | |
53 | E | A | -1.5209 | |
54 | F | A | -0.2003 | |
55 | E | A | -2.3482 | |
56 | H | A | -2.7173 | |
57 | K | A | -2.5516 | |
58 | T | A | -1.3386 | |
59 | Q | A | -1.1112 | |
60 | I | A | 0.6120 | |
61 | S | A | -0.7797 | |
62 | E | A | -2.2692 | |
63 | P | A | -1.5326 | |
64 | E | A | -1.7791 | |
65 | S | A | 0.0568 | |
66 | F | A | 1.9237 | |
67 | V | A | 1.8522 | |
68 | A | A | 0.1728 | |
69 | K | A | -2.1626 | |
70 | H | A | -3.4141 | |
71 | E | A | -4.4536 | |
72 | E | A | -4.7556 | |
73 | E | A | -4.8377 | |
74 | E | A | -4.4669 | |
75 | H | A | -3.5340 | |
76 | K | A | -3.1489 | |
77 | P | A | -1.4982 | |
78 | T | A | 0.0061 | |
79 | L | A | 1.3816 | |
80 | L | A | 1.3944 | |
81 | E | A | -1.4275 | |
82 | Q | A | -1.3196 | |
83 | L | A | -0.3166 | |
84 | H | A | -2.5629 | |
85 | Q | A | -3.8817 | |
86 | K | A | -4.7594 | |
87 | H | A | -4.9596 | |
88 | E | A | -5.4762 | |
89 | E | A | -5.8074 | |
90 | E | A | -5.7644 | |
91 | E | A | -5.8444 | |
92 | E | A | -5.1068 | |
93 | N | A | -4.1514 | |
94 | K | A | -3.6941 | |
95 | P | A | -2.3149 | |
96 | S | A | -1.2501 | |
97 | L | A | 1.0579 | |
98 | L | A | 0.9669 | |
99 | D | A | -1.7864 | |
100 | K | A | -1.6851 | |
101 | L | A | -0.1005 | |
102 | H | A | -2.0916 | |
103 | R | A | -2.8313 | |
104 | S | A | -2.3893 | |
105 | N | A | -2.2888 | |
106 | S | A | -1.3768 | |
107 | S | A | -0.9599 | |
108 | S | A | -0.7578 | |
109 | S | A | -0.6021 | |
110 | S | A | -0.7961 | |
111 | S | A | -1.1904 | |
112 | S | A | -1.9079 | |
113 | D | A | -3.3773 | |
114 | E | A | -4.0442 | |
115 | E | A | -4.0726 | |
116 | G | A | -3.4093 | |
117 | E | A | -3.9415 | |
118 | D | A | -3.8310 | |
119 | G | A | -3.1169 | |
120 | E | A | -4.0414 | |
121 | K | A | -4.3837 | |
122 | K | A | -4.3923 | |
123 | K | A | -4.6129 | |
124 | K | A | -4.6515 | |
125 | E | A | -4.6951 | |
126 | K | A | -4.6689 | |
127 | K | A | -4.2307 | |
128 | K | A | -3.2641 | |
129 | K | A | -1.9284 | |
130 | I | A | 0.7725 | |
131 | V | A | 0.7747 | |
132 | E | A | -1.3189 | |
133 | G | A | -1.6275 | |
134 | D | A | -2.4844 | |
135 | H | A | -1.6332 | |
136 | V | A | 0.0109 | |
137 | K | A | -2.1927 | |
138 | T | A | -1.7613 | |
139 | V | A | -1.0044 | |
140 | E | A | -3.3647 | |
141 | E | A | -4.1318 | |
142 | E | A | -3.5496 | |
143 | N | A | -3.0854 | |
144 | Q | A | -3.2461 | |
145 | G | A | -2.3639 | |
146 | V | A | -1.0841 | |
147 | M | A | -0.9767 | |
148 | D | A | -2.5669 | |
149 | R | A | -2.5079 | |
150 | I | A | -0.1713 | |
151 | K | A | -1.9392 | |
152 | E | A | -2.8883 | |
153 | K | A | -1.9328 | |
154 | F | A | 0.3730 | |
155 | P | A | -0.1743 | |
156 | L | A | 0.5326 | |
157 | G | A | -0.9799 | |
158 | E | A | -2.6353 | |
159 | K | A | -2.8525 | |
160 | P | A | -2.4820 | |
161 | G | A | -2.1698 | |
162 | G | A | -2.1113 | |
163 | D | A | -2.5983 | |
164 | D | A | -1.8260 | |
165 | V | A | 0.9978 | |
166 | P | A | 1.2205 | |
167 | V | A | 2.7392 | |
168 | V | A | 2.8903 | |
169 | T | A | 1.3978 | |
170 | T | A | 1.1089 | |
171 | M | A | 1.0942 | |
172 | P | A | 0.2154 | |
173 | A | A | -0.2523 | |
174 | P | A | -0.6140 | |
175 | H | A | -0.9822 | |
176 | S | A | -0.5853 | |
177 | V | A | -0.1422 | |
178 | E | A | -2.5337 | |
179 | D | A | -3.1962 | |
180 | H | A | -3.3117 | |
181 | K | A | -3.8912 | |
182 | P | A | -3.6927 | |
183 | E | A | -4.5449 | |
184 | E | A | -5.1678 | |
185 | E | A | -4.9263 | |
186 | E | A | -4.4081 | |
187 | K | A | -4.0448 | |
188 | K | A | -3.7893 | |
189 | G | A | -2.3947 | |
190 | F | A | -0.7659 | |
191 | M | A | -1.1041 | |
192 | D | A | -2.9007 | |
193 | K | A | -2.6377 | |
194 | I | A | -1.0508 | |
195 | K | A | -2.8844 | |
196 | E | A | -3.6969 | |
197 | K | A | -2.9209 | |
198 | L | A | -1.3021 | |
199 | P | A | -1.0840 | |
200 | G | A | -1.9354 | |
201 | H | A | -2.8418 | |
202 | S | A | -2.7030 | |
203 | K | A | -3.2659 | |
204 | K | A | -3.5281 | |
205 | P | A | -2.8721 | |
206 | E | A | -3.4739 | |
207 | D | A | -3.3648 | |
208 | S | A | -1.5250 | |
209 | Q | A | -0.4791 | |
210 | V | A | 1.6371 | |
211 | V | A | 1.6055 | |
212 | N | A | -0.1439 | |
213 | T | A | 0.0634 | |
214 | T | A | 0.2207 | |
215 | P | A | 0.5536 | |
216 | L | A | 1.8357 | |
217 | V | A | 1.4956 | |
218 | E | A | -0.5859 | |
219 | T | A | -0.6072 | |
220 | A | A | -0.2390 | |
221 | T | A | 0.2639 | |
222 | P | A | 0.4271 | |
223 | I | A | 1.6346 | |
224 | A | A | 0.6205 | |
225 | D | A | -0.5219 | |
226 | I | A | 0.2989 | |
227 | P | A | -1.5869 | |
228 | E | A | -3.3625 | |
229 | E | A | -3.1296 | |
230 | K | A | -3.1849 | |
231 | K | A | -3.4618 | |
232 | G | A | -2.2259 | |
233 | F | A | -0.7026 | |
234 | M | A | -0.9857 | |
235 | D | A | -2.5729 | |
236 | K | A | -2.4174 | |
237 | I | A | -0.5153 | |
238 | K | A | -1.7348 | |
239 | E | A | -2.9595 | |
240 | K | A | -2.5244 | |
241 | L | A | -0.8115 | |
242 | P | A | -0.6864 | |
243 | G | A | -0.5996 | |
244 | Y | A | -0.5073 | |
245 | H | A | -1.5806 | |
246 | A | A | -1.1865 | |
247 | K | A | -2.1587 | |
248 | T | A | -1.5065 | |
249 | T | A | -1.8317 | |
250 | G | A | -2.7173 | |
251 | E | A | -3.8081 | |
252 | E | A | -4.2497 | |
253 | E | A | -4.8491 | |
254 | K | A | -4.7693 | |
255 | K | A | -4.1573 | |
256 | E | A | -3.7408 | |
257 | K | A | -2.7763 | |
258 | V | A | -0.3799 | |
259 | S | A | -0.9761 | |
260 | D | A | -1.6843 |