Chain sequence(s) |
A: MAEENQNKYEETTATNSETEIKDRGVFDFLGGKKKDEEHIKPQEDAVATDFSHKVTLYEAPSETKVEEKEEGEKKHTSLLEKLHRSDSSSSSSSEEEVDGERRKKKKKEKKEKKEDTSVPVEKVDVVDGTTASTEEKKGFLDKIKEKLPGHKKTDDVTTPPPVVVAPAVPSAETTTTTASHDQGEKKGILEKIKEKIPGYHPKTATEHEDNKDHHKDETTSH
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:02) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.6746 | |
2 | A | A | -0.9149 | |
3 | E | A | -2.9470 | |
4 | E | A | -3.8044 | |
5 | N | A | -3.8209 | |
6 | Q | A | -3.5322 | |
7 | N | A | -3.1459 | |
8 | K | A | -2.9395 | |
9 | Y | A | -1.3837 | |
10 | E | A | -2.7199 | |
11 | E | A | -2.6085 | |
12 | T | A | -1.3119 | |
13 | T | A | -1.0498 | |
14 | A | A | -0.6767 | |
15 | T | A | -1.0037 | |
16 | N | A | -1.9691 | |
17 | S | A | -1.9713 | |
18 | E | A | -2.6210 | |
19 | T | A | -1.7140 | |
20 | E | A | -2.2319 | |
21 | I | A | -0.7603 | |
22 | K | A | -2.7194 | |
23 | D | A | -3.0335 | |
24 | R | A | -2.4929 | |
25 | G | A | -0.6648 | |
26 | V | A | 2.0788 | |
27 | F | A | 2.3278 | |
28 | D | A | 0.0641 | |
29 | F | A | 2.3876 | |
30 | L | A | 2.1129 | |
31 | G | A | -0.3269 | |
32 | G | A | -1.5710 | |
33 | K | A | -3.2617 | |
34 | K | A | -4.1625 | |
35 | K | A | -4.5535 | |
36 | D | A | -4.6432 | |
37 | E | A | -4.1567 | |
38 | E | A | -3.6134 | |
39 | H | A | -1.9405 | |
40 | I | A | -0.1751 | |
41 | K | A | -1.8748 | |
42 | P | A | -2.0468 | |
43 | Q | A | -2.9002 | |
44 | E | A | -3.3062 | |
45 | D | A | -2.5889 | |
46 | A | A | -0.6176 | |
47 | V | A | 0.8876 | |
48 | A | A | 0.4596 | |
49 | T | A | -0.1307 | |
50 | D | A | -0.8045 | |
51 | F | A | 0.4316 | |
52 | S | A | -0.5254 | |
53 | H | A | -1.1176 | |
54 | K | A | -0.9528 | |
55 | V | A | 1.1892 | |
56 | T | A | 1.0579 | |
57 | L | A | 2.0356 | |
58 | Y | A | 1.3607 | |
59 | E | A | -0.9140 | |
60 | A | A | -0.7694 | |
61 | P | A | -1.0250 | |
62 | S | A | -1.4139 | |
63 | E | A | -2.3859 | |
64 | T | A | -1.4421 | |
65 | K | A | -1.7130 | |
66 | V | A | -0.4103 | |
67 | E | A | -2.5153 | |
68 | E | A | -3.7511 | |
69 | K | A | -4.5147 | |
70 | E | A | -4.4453 | |
71 | E | A | -4.2376 | |
72 | G | A | -3.5828 | |
73 | E | A | -4.2209 | |
74 | K | A | -4.0340 | |
75 | K | A | -3.6749 | |
76 | H | A | -2.5909 | |
77 | T | A | -1.4877 | |
78 | S | A | -0.2712 | |
79 | L | A | 1.1589 | |
80 | L | A | 1.1588 | |
81 | E | A | -1.6049 | |
82 | K | A | -1.5042 | |
83 | L | A | -0.0545 | |
84 | H | A | -2.2726 | |
85 | R | A | -3.0061 | |
86 | S | A | -2.1783 | |
87 | D | A | -2.7879 | |
88 | S | A | -1.7110 | |
89 | S | A | -1.1074 | |
90 | S | A | -0.7844 | |
91 | S | A | -0.5656 | |
92 | S | A | -0.5563 | |
93 | S | A | -1.1037 | |
94 | S | A | -1.6838 | |
95 | E | A | -3.0978 | |
96 | E | A | -3.4096 | |
97 | E | A | -2.8068 | |
98 | V | A | -0.9366 | |
99 | D | A | -2.2585 | |
100 | G | A | -2.5553 | |
101 | E | A | -3.5858 | |
102 | R | A | -4.1413 | |
103 | R | A | -4.5447 | |
104 | K | A | -4.1569 | |
105 | K | A | -4.1649 | |
106 | K | A | -4.3278 | |
107 | K | A | -4.1118 | |
108 | K | A | -4.3218 | |
109 | E | A | -4.4336 | |
110 | K | A | -4.1767 | |
111 | K | A | -4.5847 | |
112 | E | A | -4.7122 | |
113 | K | A | -4.5185 | |
114 | K | A | -4.5919 | |
115 | E | A | -4.2937 | |
116 | D | A | -3.2477 | |
117 | T | A | -1.1897 | |
118 | S | A | 0.1313 | |
119 | V | A | 1.4864 | |
120 | P | A | 0.5790 | |
121 | V | A | 0.9511 | |
122 | E | A | -1.3485 | |
123 | K | A | -1.6007 | |
124 | V | A | 0.4994 | |
125 | D | A | -0.6039 | |
126 | V | A | 1.4525 | |
127 | V | A | 1.2949 | |
128 | D | A | -0.9838 | |
129 | G | A | -0.8064 | |
130 | T | A | -0.3472 | |
131 | T | A | -1.0550 | |
132 | A | A | -1.3027 | |
133 | S | A | -1.7842 | |
134 | T | A | -2.5693 | |
135 | E | A | -3.5521 | |
136 | E | A | -3.6291 | |
137 | K | A | -3.3670 | |
138 | K | A | -3.4304 | |
139 | G | A | -2.3427 | |
140 | F | A | -0.5908 | |
141 | L | A | -0.9417 | |
142 | D | A | -2.7490 | |
143 | K | A | -2.2742 | |
144 | I | A | -0.7206 | |
145 | K | A | -2.1006 | |
146 | E | A | -3.3909 | |
147 | K | A | -2.4778 | |
148 | L | A | -0.8600 | |
149 | P | A | -0.9889 | |
150 | G | A | -1.8749 | |
151 | H | A | -2.8632 | |
152 | K | A | -3.5512 | |
153 | K | A | -3.7161 | |
154 | T | A | -2.5597 | |
155 | D | A | -3.0769 | |
156 | D | A | -2.0895 | |
157 | V | A | 0.4146 | |
158 | T | A | 0.0834 | |
159 | T | A | 0.0922 | |
160 | P | A | -0.2858 | |
161 | P | A | -0.1348 | |
162 | P | A | 0.8399 | |
163 | V | A | 2.7734 | |
164 | V | A | 3.5189 | |
165 | V | A | 3.0873 | |
166 | A | A | 1.1649 | |
167 | P | A | 0.6887 | |
168 | A | A | 0.8067 | |
169 | V | A | 1.5585 | |
170 | P | A | 0.6740 | |
171 | S | A | -0.2919 | |
172 | A | A | -1.1016 | |
173 | E | A | -1.8825 | |
174 | T | A | -0.9766 | |
175 | T | A | -0.5669 | |
176 | T | A | -0.1691 | |
177 | T | A | -0.1639 | |
178 | T | A | -0.2633 | |
179 | A | A | -0.3174 | |
180 | S | A | -1.2458 | |
181 | H | A | -2.2571 | |
182 | D | A | -3.4178 | |
183 | Q | A | -3.2037 | |
184 | G | A | -3.3064 | |
185 | E | A | -3.8885 | |
186 | K | A | -3.7440 | |
187 | K | A | -3.0505 | |
188 | G | A | -0.5842 | |
189 | I | A | 1.5613 | |
190 | L | A | 1.4141 | |
191 | E | A | -1.1959 | |
192 | K | A | -1.2846 | |
193 | I | A | 1.0564 | |
194 | K | A | -0.6518 | |
195 | E | A | -2.3175 | |
196 | K | A | -1.7941 | |
197 | I | A | 0.0871 | |
198 | P | A | -0.5168 | |
199 | G | A | -0.6911 | |
200 | Y | A | -0.5773 | |
201 | H | A | -1.8895 | |
202 | P | A | -1.7601 | |
203 | K | A | -2.4724 | |
204 | T | A | -1.3623 | |
205 | A | A | -1.0289 | |
206 | T | A | -1.8453 | |
207 | E | A | -3.4694 | |
208 | H | A | -3.8793 | |
209 | E | A | -4.2718 | |
210 | D | A | -4.4900 | |
211 | N | A | -4.1629 | |
212 | K | A | -4.3228 | |
213 | D | A | -4.1312 | |
214 | H | A | -3.6341 | |
215 | H | A | -3.6571 | |
216 | K | A | -3.9602 | |
217 | D | A | -4.0755 | |
218 | E | A | -3.4421 | |
219 | T | A | -1.7656 | |
220 | T | A | -1.0615 | |
221 | S | A | -0.7439 | |
222 | H | A | -1.1183 |