Chain sequence(s) |
A: MAESDGAEYRCFVGSLSWNTDDRGLEAAFSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEGMNGKELDGRSIVVNEAQSRGYGGGGGGRYGGGGGGGGGRYGGGGAYGQRRDDGYGDDGYGGGRGYGGGRYGGGRGYGGRRDGGYGRGGNSDGY
input PDB |
Selected Chain(s) | A |
Distance of aggregation | 10 Å |
FoldX usage | No |
pH calculations | No |
alphaCutter usage | No |
Dynamic mode | No |
Automated mutations | No |
Downloads | Download all the data |
Simulation log |
[INFO] Logger: Verbosity set to: 2 - [INFO] (00:00:00) [WARNING] runJob: Working directory already exists (possibly overwriting previous results -ow to prevent this behavior) (00:00:00) [INFO] runJob: Starting aggrescan3d job on: input.pdb with A chain(s) selected (00:00:00) [INFO] runJob: Creating pdb object from: input.pdb (00:00:00) [INFO] runJob: FoldX not utilized. Treating input pdb file as it was already optimized. (00:00:00) [INFO] Analysis: Starting Aggrescan4D on folded.pdb (00:00:01) [INFO] Main: Simulation completed successfully. (00:00:01) |
The table below lists A4D score for protein residues. Residues with A4D score > 0.0000 are marked by yellow rows.
residue index | residue name | chain | Aggrescan4D score | mutation |
---|---|---|---|---|
1 | M | A | 0.5573 | |
2 | A | A | -0.6399 | |
3 | E | A | -2.1041 | |
4 | S | A | -1.9702 | |
5 | D | A | -2.6903 | |
6 | G | A | -2.1581 | |
7 | A | A | -1.9585 | |
8 | E | A | -2.5322 | |
9 | Y | A | -1.9276 | |
10 | R | A | -1.6628 | |
11 | C | A | 0.0000 | |
12 | F | A | -0.2323 | |
13 | V | A | 0.0000 | |
14 | G | A | 0.0000 | |
15 | S | A | -0.2784 | |
16 | L | A | 0.0000 | |
17 | S | A | 0.0000 | |
18 | W | A | -0.8550 | |
19 | N | A | -1.6585 | |
20 | T | A | -1.8665 | |
21 | D | A | -3.5382 | |
22 | D | A | -3.7434 | |
23 | R | A | -3.7668 | |
24 | G | A | -2.7499 | |
25 | L | A | 0.0000 | |
26 | E | A | -3.1871 | |
27 | A | A | -1.3684 | |
28 | A | A | -0.8356 | |
29 | F | A | 0.0000 | |
30 | S | A | -1.0035 | |
31 | S | A | -0.4248 | |
32 | F | A | -0.5905 | |
33 | G | A | -1.5068 | |
34 | E | A | -1.9367 | |
35 | I | A | -0.8564 | |
36 | L | A | -0.1267 | |
37 | D | A | -1.8286 | |
38 | A | A | -2.2329 | |
39 | K | A | -2.5172 | |
40 | I | A | -1.3435 | |
41 | I | A | -1.0766 | |
42 | N | A | -3.1926 | |
43 | D | A | -3.6569 | |
44 | R | A | -3.9594 | |
45 | E | A | -3.4826 | |
46 | T | A | -2.8232 | |
47 | G | A | -3.2182 | |
48 | R | A | -3.5970 | |
49 | S | A | -2.6919 | |
50 | R | A | -2.7221 | |
51 | G | A | 0.0000 | |
52 | F | A | -0.1736 | |
53 | G | A | 0.0000 | |
54 | F | A | -0.1652 | |
55 | V | A | 0.0000 | |
56 | S | A | -1.2161 | |
57 | F | A | 0.0000 | |
58 | S | A | -1.5919 | |
59 | N | A | -2.6560 | |
60 | E | A | -3.4608 | |
61 | Q | A | -2.9544 | |
62 | A | A | 0.0000 | |
63 | M | A | 0.0000 | |
64 | Q | A | -3.5031 | |
65 | D | A | -3.3417 | |
66 | A | A | 0.0000 | |
67 | I | A | -2.4256 | |
68 | E | A | -3.3751 | |
69 | G | A | -2.1954 | |
70 | M | A | -2.0503 | |
71 | N | A | -2.4959 | |
72 | G | A | -2.2696 | |
73 | K | A | -3.3065 | |
74 | E | A | -3.3553 | |
75 | L | A | -2.0569 | |
76 | D | A | -2.6583 | |
77 | G | A | -2.2339 | |
78 | R | A | -2.2030 | |
79 | S | A | -2.1524 | |
80 | I | A | 0.0000 | |
81 | V | A | -0.2018 | |
82 | V | A | 0.0000 | |
83 | N | A | -2.1513 | |
84 | E | A | -2.3104 | |
85 | A | A | 0.0000 | |
86 | Q | A | -2.3782 | |
87 | S | A | -2.0635 | |
88 | R | A | -2.3428 | |
89 | G | A | -1.6108 | |
90 | Y | A | -0.1271 | |
91 | G | A | -0.8471 | |
92 | G | A | -0.7706 | |
93 | G | A | -1.2198 | |
94 | G | A | -1.2251 | |
95 | G | A | -1.2641 | |
96 | G | A | -1.5341 | |
97 | R | A | -1.6881 | |
98 | Y | A | -0.1116 | |
99 | G | A | -0.5848 | |
100 | G | A | -0.9689 | |
101 | G | A | -1.1620 | |
102 | G | A | -1.1623 | |
103 | G | A | -1.1633 | |
104 | G | A | -1.2199 | |
105 | G | A | -1.1645 | |
106 | G | A | -1.4637 | |
107 | G | A | -1.4875 | |
108 | R | A | -1.5616 | |
109 | Y | A | -0.1351 | |
110 | G | A | -0.5922 | |
111 | G | A | -0.7939 | |
112 | G | A | -0.9370 | |
113 | G | A | -0.5972 | |
114 | A | A | 0.0997 | |
115 | Y | A | 0.4372 | |
116 | G | A | -0.8498 | |
117 | Q | A | -2.6907 | |
118 | R | A | -3.6948 | |
119 | R | A | -4.4215 | |
120 | D | A | -4.2885 | |
121 | D | A | -3.0392 | |
122 | G | A | -1.3866 | |
123 | Y | A | 0.0895 | |
124 | G | A | -1.1608 | |
125 | D | A | -2.7793 | |
126 | D | A | -2.7986 | |
127 | G | A | -1.1926 | |
128 | Y | A | 0.2554 | |
129 | G | A | -0.3976 | |
130 | G | A | -1.0087 | |
131 | G | A | -1.6560 | |
132 | R | A | -2.1379 | |
133 | G | A | -0.9278 | |
134 | Y | A | 0.3972 | |
135 | G | A | -0.2190 | |
136 | G | A | -1.0514 | |
137 | G | A | -1.4336 | |
138 | R | A | -1.6224 | |
139 | Y | A | -0.0012 | |
140 | G | A | -0.5550 | |
141 | G | A | -1.0308 | |
142 | G | A | -1.8194 | |
143 | R | A | -2.1205 | |
144 | G | A | -0.9364 | |
145 | Y | A | 0.1831 | |
146 | G | A | -0.7679 | |
147 | G | A | -2.1120 | |
148 | R | A | -3.4506 | |
149 | R | A | -4.1381 | |
150 | D | A | -3.6520 | |
151 | G | A | -1.7258 | |
152 | G | A | -1.0379 | |
153 | Y | A | 0.2278 | |
154 | G | A | -1.0447 | |
155 | R | A | -2.2694 | |
156 | G | A | -1.9551 | |
157 | G | A | -2.0018 | |
158 | N | A | -2.3575 | |
159 | S | A | -1.9683 | |
160 | D | A | -2.1893 | |
161 | G | A | -1.0373 | |
162 | Y | A | 0.6621 |